prot_P-littoralis_Contig159.62.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig159.62.1
Unique Nameprot_P-littoralis_Contig159.62.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length134
Homology
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BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 3.280e-74
Identity = 125/135 (92.59%), Postives = 128/135 (94.81%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKSKNTGKAKSSAS--QDY 133
            MSGKGKGGRG KKS SKSSKAGLQFPVAR+GRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK  + GKAK+SAS  QDY
Sbjct:   52 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGKAKASASASQDY 185
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BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 5.120e-74
Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKSKNTG---KAKSSASQDY 133
            MSGKGKGGRG KKS SKSSKAGLQFPVAR+GRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK  + G   KA +SASQDY
Sbjct:    1 MSGKGKGGRG-KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVGGKAKASASASQDY 135
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BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: A0A7S2CIK1_9STRA (Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CIK1_9STRA)

HSP 1 Score: 205 bits (521), Expect = 6.330e-66
Identity = 114/136 (83.82%), Postives = 118/136 (86.76%), Query Frame = 0 
Query:    1 MSGKGKGGRGDK--KSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKSKNTGK-AKSSASQDY 133
            MSGKGK GRG    K  SKSSKAGLQFPVARVGRYLK+GK+ATRVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK RI PRHIQLAVRNDEELNKLLG VTI+SGGVLPNIHAVLLPK     K AK SASQDY
Sbjct:    1 MSGKGKSGRGKTGGKVTSKSSKAGLQFPVARVGRYLKKGKFATRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKTRITPRHIQLAVRNDEELNKLLGNVTISSGGVLPNIHAVLLPKKTGKAKLAKGSASQDY 136
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BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 1.150e-65
Identity = 109/118 (92.37%), Postives = 115/118 (97.46%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK 118
            MSGKGKGGRG KKS ++S+KAGLQFPV RVGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK
Sbjct:    1 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK 117
[Close]
BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 203 bits (516), Expect = 4.170e-65
Identity = 108/136 (79.41%), Postives = 122/136 (89.71%), Query Frame = 0 
Query:    3 GKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK-----SKNTGKAKSSASQDY 133
            GKGKGGRGDKK+ SKS+KAGLQFPV RVGR+LK+G+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPK     SK    + +SASQ+Y
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSKSKAAEASTASASQEY 140
[Close]
BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 6.690e-65
Identity = 109/118 (92.37%), Postives = 115/118 (97.46%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK 118
            MSGKGKGGRG KKS ++S+KAGLQFPV RVGR+LK+GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK
Sbjct:   46 MSGKGKGGRG-KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPK 162
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BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: W7TMB5_9STRA (Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMB5_9STRA)

HSP 1 Score: 202 bits (513), Expect = 1.010e-64
Identity = 107/135 (79.26%), Postives = 117/135 (86.67%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSA--SKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKSKNTGKAKSSASQDY 133
            M+GKGK GRG  K    S+SSKAGLQFPV R+ R+LK+G+YA RVG+GAPVYLAAVLEYLTAE+LELAGNAARDNKK RIIPRH+QLAVRNDEELNKLLG VTIASGGVLPNIH+VLLPKSK     K SASQDY
Sbjct:    1 MAGKGKSGRGGGKKGGVSRSSKAGLQFPVGRISRFLKKGRYAARVGSGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHVQLAVRNDEELNKLLGGVTIASGGVLPNIHSVLLPKSKGKKSGKGSASQDY 135
[Close]
BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: A0A7S2GRL8_9STRA (Histone H2A n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GRL8_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.630e-63
Identity = 108/135 (80.00%), Postives = 119/135 (88.15%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKSKNTGKAKSSAS--QDY 133
            MSGKGKGGRG KKS + S+KAGLQFPV R+GRYLK+GK+ATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI PRHI LAV+NDEELNKLLG VTIA GGVLPNIH+VLLPK  + GK  SSAS  QDY
Sbjct:    1 MSGKGKGGRG-KKSTTSSAKAGLQFPVGRIGRYLKQGKFATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIAPRHITLAVKNDEELNKLLGGVTIAGGGVLPNIHSVLLPKKASGGKTLSSASKSQDY 134
[Close]
BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: A0A448YXB3_9STRA (Histone H2A n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A448YXB3_9STRA)

HSP 1 Score: 198 bits (504), Expect = 2.090e-63
Identity = 108/134 (80.60%), Postives = 117/134 (87.31%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKK-SASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKSKNTGKAKSSASQDY 133
            MSGKGKGGRG KK S S S KAGLQFPV R+GRYL++GKYATR+GAGAPVYLA+VLEYL AE+LELAGNAARDNKK+RIIPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPK     K  S ASQD+
Sbjct:    1 MSGKGKGGRGAKKGSVSSSQKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLASVLEYLCAEILELAGNAARDNKKSRIIPRHITLAVKNDEELNKLLGNVTIASGGVLPNIHAVLLPKKT---KMNSKASQDF 131
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BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Match: K0S6I8_THAOC (Uncharacterized protein n=3 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6I8_THAOC)

HSP 1 Score: 204 bits (520), Expect = 3.120e-63
Identity = 108/131 (82.44%), Postives = 120/131 (91.60%), Query Frame = 0 
Query:    1 MSGKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKSKNTGKAKSSASQ 131
            MSGKGKGGRG+KKS + S+KAGLQFPV R+GRYL++GKYATR+GAGAPVYLAAVLEYL AE+LELAGNAARDNKKARIIPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPK   +GKA++  SQ
Sbjct:    1 MSGKGKGGRGEKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKARIIPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKK--SGKARAQRSQ 129
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig159.62.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVQ5_ECTSI3.280e-7492.59Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE5.120e-7491.18Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A7S2CIK1_9STRA6.330e-6683.82Histone H2A n=1 Tax=Dictyocha speculum TaxID=35687... [more]
D7FWI9_ECTSI1.150e-6592.37Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A835ZLE9_9STRA4.170e-6579.41Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
D7G193_ECTSI6.690e-6592.37Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
W7TMB5_9STRA1.010e-6479.26Histone H2A n=4 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A7S2GRL8_9STRA1.630e-6380.00Histone H2A n=1 Tax=Helicotheca tamesis TaxID=3740... [more]
A0A448YXB3_9STRA2.090e-6380.60Histone H2A n=5 Tax=Bacillariophyta TaxID=2836 Rep... [more]
K0S6I8_THAOC3.120e-6382.44Uncharacterized protein n=3 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 42..57
score: 90.36
coord: 57..70
score: 90.54
coord: 71..85
score: 77.52
coord: 99..117
score: 76.04
coord: 13..35
score: 62.9
IPR002119Histone H2ASMARTSM00414h2a4coord: 2..122
e-value: 5.9E-76
score: 268.3
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 3..130
IPR002119Histone H2ACDDcd00074H2Acoord: 22..118
e-value: 1.38099E-62
score: 185.231
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 8..88
e-value: 5.7E-16
score: 59.1
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 91..124
e-value: 1.6E-18
score: 66.2
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..128
e-value: 3.3E-63
score: 213.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 3..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR23430:SF207HISTONE H2Acoord: 3..130
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 21..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig159contigP-littoralis_Contig159:263887..264758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig159.62.1mRNA_P-littoralis_Contig159.62.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig159 263887..264758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig159.62.1 ID=prot_P-littoralis_Contig159.62.1|Name=mRNA_P-littoralis_Contig159.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=134bp
MSGKGKGGRGDKKSASKSSKAGLQFPVARVGRYLKRGKYATRVGAGAPVY
LAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEV
TIASGGVLPNIHAVLLPKSKNTGKAKSSASQDY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR007125Histone_H2A/H2B/H3
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR032458Histone_H2A_CS