mRNA_P-littoralis_Contig159.31.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig159.31.3
Unique NamemRNA_P-littoralis_Contig159.31.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: D8LMQ3_ECTSI (Nitroreductase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMQ3_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 3.690e-152
Identity = 243/335 (72.54%), Postives = 267/335 (79.70%), Query Frame = 1
Query:   25 MVSRVLRLRPEILGLCGRSRGASYTAAVASTLLLSLRNQGKGSAAMFSVCSSVRRLHQDSNIQAEDDAGLSRFSSSSSSSPPEGLKAFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFGVGMAGIDPVVP 1029
            M SRV+R +  +LG C R  G      VA +L        + SAAMFSV SS  RL Q  +   ++DA LS  SSS S   PEGLKAFRD+VTSRTAA SFSDEE+DP  LR+IMALTQSAPSSFNIQPWSVV+VRD A R++LST MLGGN KKVLAAPVTAVFCADLEPSKRINRMVEL+R+AGM EA+ITK  LAVNLFSGEG+VGN VRNAVT+IASPMQPAPEV SAEAWSFKNTALAVQTYILSC AHGLDTAPMEGFDARRVRAALDIPDRYGIP++V TGYPAP K     +  G   A+RWRYP QEVVFDG FGVGM G+DPVVP
Sbjct:    1 MFSRVVRPQEALLGRCIRKHG------VAESL--------RCSAAMFSVRSSSPRLRQGEDANLQEDADLSGNSSSLS---PEGLKAFRDVVTSRTAAISFSDEEVDPPALREIMALTQSAPSSFNIQPWSVVVVRDTAARERLSTAMLGGNAKKVLAAPVTAVFCADLEPSKRINRMVELNRKAGMPEAEITKFCLAVNLFSGEGVVGNAVRNAVTTIASPMQPAPEVASAEAWSFKNTALAVQTYILSCTAHGLDTAPMEGFDARRVRAALDIPDRYGIPIIVPTGYPAPSKPEG--QGGGGGVARRWRYPPQEVVFDGTFGVGMTGVDPVVP 316          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: A0A835Z3C4_9STRA (Putative nitroreductase family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C4_9STRA)

HSP 1 Score: 218 bits (555), Expect = 3.160e-64
Identity = 113/244 (46.31%), Postives = 152/244 (62.30%), Query Frame = 1
Query:  307 RTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFGVGMAGIDPVVPKKL 1038
            R AA  F  + +   ++ D++A+T   P+SFN QPW+ ++VRD   ++ L+  M+G N  KV AAP+TAVF ADL+P++R+ RM+E  RRAG  E  + +L   + LF GEG     +R  VT+  SP++P P V S EAWS+K+  LA QTY+L+  AHGL TAPMEGFD RRV AALD+PDRYG+ + V TGY  PQ A          SA  WR+  +E+VF   FG  +    P VP  L
Sbjct:    3 RHAAKRFLPDAVPEDIINDVLAMTIRTPTSFNAQPWACIIVRDEEQKEALAQAMVGPNIMKVRAAPLTAVFLADLQPTRRVPRMMEEERRAGTPEERVARLPAMIGLFGGEGAAAEALRRGVTAALSPLKPMPSVTSTEAWSYKHAGLAAQTYLLAATAHGLATAPMEGFDGRRVCAALDVPDRYGVAVAVATGYEDPQHAP---------SAASWRFAPEEMVFLDRFGAPV----PDVPTSL 233          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: A0A484DVA5_BRELC (Nitroreductase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVA5_BRELC)

HSP 1 Score: 203 bits (516), Expect = 5.180e-58
Identity = 106/249 (42.57%), Postives = 148/249 (59.44%), Query Frame = 1
Query:  274 GLKAFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFGVGMAGIDP 1020
            G  A +D +  R A  +F    +    L++I+ LT  AP+SFN+QP++ +LVR    RKKL+  M+GGN +KV+ APV AVF ADLEP+KR+ R+ +L+  +G     ++ +   V LFSGEG++ +++R  +++  SP+QPAP   S EAWSFK T+ A  T++ +   HGL T PMEGFD  RVR ALDIPDRY +P+V+  GY  P    K             R    E+ FDG FG     I P
Sbjct:   26 GSTALKDAIEERYACKAFLPCHVSDETLKEILKLTLRAPTSFNVQPYACILVRQEKDRKKLAEAMMGGNARKVIEAPVIAVFAADLEPTKRVPRLQKLAYDSGAPADFVSNMPHVVRLFSGEGMISSMLRKIISTAVSPLQPAPSDVSTEAWSFKQTSFAAATFLYAAQVHGLATCPMEGFDIIRVRNALDIPDRYSVPVVIALGYADPSAKPKKLSE---------RLDPTEMFFDGKFGDSCKKIFP 265          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: W4GD81_9STRA (Nitroreductase domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GD81_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.320e-56
Identity = 105/242 (43.39%), Postives = 143/242 (59.09%), Query Frame = 1
Query:  280 KAFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFGVGM 1005
            +AFR +   R + + +  + I   +L+DIM  TQ APS FN+QP++ VLV+DAA R  LS  MLG N +KV  AP+ AVF +DLEPSKR+  + E+ R AG + ADI +L L +  F GEG +   +RN +++  +P QP P      AWS+K+T LAV  YIL+  +HG+    MEGFD   VR ALDIPDRY +P+VV +GYP     S +            R    +V F G FG  +
Sbjct:    4 QAFRSLARQRRSVYKYQSKAIPNDILKDIMLTTQRAPSGFNLQPYACVLVQDAADRNTLSAAMLGDNVRKVKEAPLIAVFASDLEPSKRVPAIQEMMRSAGQSTADIQQLPLKLRFFGGEGHLAGAIRNGLSTALTPFQPVPTYVPTIAWSYKSTMLAVSQYILAAESHGIGCCVMEGFDETWVRHALDIPDRYSVPVVVASGYPIEVDPSPALSP---------RLAPSQVFFGGKFGAAV 236          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: A0A2D4CFG6_PYTIN (Nitroreductase family, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFG6_PYTIN)

HSP 1 Score: 204 bits (519), Expect = 6.650e-56
Identity = 114/275 (41.45%), Postives = 162/275 (58.91%), Query Frame = 1
Query:  271 EGLKAFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFGVGMAGI-----DPVVPKKL*LPRTTCTQYTVAD 1080
            +  +A R ++ SRTA  SF+ + +   VL D++ LTQ APS FN+QP++ V+VR+ A R++L+  ML  N +KV  APV AVF ADLEPS+R+ R+ ++    G +   +  L     LFSGEG V   +R  ++++ SP++  P      AWSFK TA A   ++ + +A+GL T PMEGFD  RV+ ALDIPDRY IP+VVC GYP     + +  SSGA SA    +P  EV FDG FG   A +     +  +  K  L R    + +V +
Sbjct:   17 DAQEALRKLIASRTACRSFASDPVPDDVLADVLRLTQRAPSGFNMQPYACVVVREQADRERLADAMLASNGRKVREAPVVAVFAADLEPSRRVPRIQKMMHDNGASAEAVNNLPHYTRLFSGEGEVAGGIRRLISTVVSPIRAVPSHVPTIAWSFKQTAFAASAFLHAASAYGLATCPMEGFDETRVKHALDIPDRYAIPVVVCCGYP-----NAATSSSGAPSASPRLHPT-EVFFDGKFGSSTASLFGDADEHTMASKTELSRIISERVSVRE 285          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: A0A8K1CTI1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTI1_PYTOL)

HSP 1 Score: 196 bits (499), Expect = 2.190e-55
Identity = 106/248 (42.74%), Postives = 152/248 (61.29%), Query Frame = 1
Query:  271 EGLKAFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFGVGMAGI 1014
            +  +  R ++ SR +A  FS E +   VL +++ +TQ APS+FN QP++ +LVRD A R +L+  ML  N +KV  APV AVF ADLEPS+R+ R+ ++    G + A++  L L + +F+GEG + + +R+ ++++ SP++  P      AWSFK T  A  T++ +  + GL T PMEG+D  RVRAALDIPDRYGIP+++  GYP   KA     S G S     R  A EV FDG FG   A I
Sbjct:   26 DAREQLRQLLLSRASARGFSPEPVPDDVLANVVKMTQRAPSAFNTQPYACILVRDQADRDRLAGAMLASNGQKVKDAPVVAVFAADLEPSRRVPRLQKMMYDNGASPAEVNNLPLYLRMFAGEGHIADGIRSVISTVISPLRAVPGAVPTIAWSFKQTTFAAATFLHAAESQGLVTRPMEGYDETRVRAALDIPDRYGIPVIIGCGYP---KADAETSSRGPSP----RLEAIEVFFDGKFGQSSANI 266          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: A0A024U8C5_9STRA (Nitroreductase domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U8C5_9STRA)

HSP 1 Score: 192 bits (488), Expect = 3.050e-54
Identity = 103/239 (43.10%), Postives = 144/239 (60.25%), Query Frame = 1
Query:  280 KAFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFG 996
            +AFR +   R + + F +++I   +L+DI+  TQ APS FN+QP++ +LV+D   R  LS  MLG N +KV  AP+ AVF ADLEPSKR+  + E+   AG + ADI +L L +  F GEG +  V+R+ +++  +P QP P      AWS+K+T LAV  YIL+  +HG+ +  MEGFD   VR ALDIPDRY +P+VV +GY A   A  S+  S        R    +V F   FG
Sbjct:    4 QAFRSLARQRRSLYKFQNKDIPKDILKDILLTTQRAPSGFNLQPYACMLVQDPTDRNALSAAMLGDNVRKVKEAPLIAVFAADLEPSKRVPAIQEMMATAGQSTADIQQLPLKLRFFGGEGHLAGVIRSGISTALTPFQPVPTYVPTIAWSYKSTMLAVSQYILAAESHGIGSCVMEGFDETWVRHALDIPDRYSVPVVVASGYAA---AENSQPPSP-------RLDPSQVFFGAKFG 232          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: A0A1V9ZJF0_9STRA (Nitroreductase family n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJF0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 8.910e-54
Identity = 103/245 (42.04%), Postives = 146/245 (59.59%), Query Frame = 1
Query:  283 AFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFGVGMAGID 1017
            AFR +   R +   F  + +D AV+ DI+  T+ AP+S N+QP++ +LV+DAA R+ LS  MLGGN  KVL AP+ AVF ADLEPSKR+  +  + R AG   + +  L   +  F GEG +   +R  +++  SP++P P      AW+FK T +A  T+  +  +HGL T  MEGFD  R+R ALDIPDRY +P+VV  GYPA   A+  R+ S        R P+ E+ F G FG  + G++
Sbjct:    6 AFRALAHQRRSVGRFLPKTVDHAVVHDILQSTRRAPTSLNMQPYACILVQDAAEREALSAAMLGGNVNKVLDAPLVAVFAADLEPSKRVPAVQHMLREAGAHPSSVQSLDAKLRFFGGEGHLAGGIRALISTAVSPLRPVPTYVPVTAWAFKQTMIAATTFTYAAESHGLATQLMEGFDDTRLRHALDIPDRYSVPVVVACGYPA--DANAPRDPSP-------RLPSSELFFAGKFGQKVPGLE 241          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: A0A6G0XIZ5_9STRA (Nitroreductase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIZ5_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.700e-53
Identity = 100/239 (41.84%), Postives = 145/239 (60.67%), Query Frame = 1
Query:  280 KAFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFG 996
            +AFR +   R + + + ++ I   +L D++  TQ APS FN+QP++ V+V+D   R +LST MLG N +KV  AP+ AVF +DLEPSKR+  + +L   AG + ADI +L + +  F GEG +  ++R+ +++  +P Q  P      AWS+K+T LAV  Y+L+  +HG+ T  MEGFD  R+R ALDIPDRY +P+VV  GYP         ES+   +    R    EV FDG FG
Sbjct:    3 QAFRALARQRRSVYQYQNKPIPKEILEDVLQTTQRAPSGFNLQPYACVVVQDPDERAQLSTAMLGDNIRKVKDAPLVAVFASDLEPSKRVPAIQQLMETAGQSTADIHQLPMKLRFFGGEGHLAGLIRSGISAAFTPFQAVPTYAPTIAWSYKSTMLAVTHYVLALESHGIGTCVMEGFDETRLRHALDIPDRYSVPVVVTAGYPV--------ESTKPLTL---RLDPNEVFFDGKFG 230          
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Match: A0A485L4K4_9STRA (Aste57867_15817 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4K4_9STRA)

HSP 1 Score: 189 bits (480), Expect = 4.530e-53
Identity = 102/243 (41.98%), Postives = 142/243 (58.44%), Query Frame = 1
Query:  280 KAFRDIVTSRTAAFSFSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLGGNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVNLFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILSCAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRESSGASSAKRWRYPAQEVVFDGAFGVGMA 1008
            +AFR +   R +   +    I   +L+DI+  TQ APS FN+QP++ ++V+D A R+ LS TMLG N +KV  AP+ AVF ADLEPSKR+  + E+   AG + ADI +L L +  F GEG +   +R+ +++  +P Q  P      AWS+K+T +AV  Y+L+  +HGL +  MEGFD  RVR ALDIPDRY +P+VV +GYP P                  R    +V FDG FG   A
Sbjct:    3 QAFRTLARQRRSIRGYEKTAIPKDILQDILLTTQRAPSGFNLQPYACIVVQDTAQRELLSATMLGDNIRKVKEAPLVAVFAADLEPSKRVPAIQEMMTAAGESVADIHQLPLKLRFFGGEGHLAGAIRSGISAAFTPFQAVPTYVPTIAWSYKSTMMAVSQYLLAAESHGLGSCVMEGFDEVRVRHALDIPDRYSVPVVVTSGYPKPVTDVPPPSP---------RLDPTQVFFDGKFGASAA 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig159.31.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMQ3_ECTSI3.690e-15272.54Nitroreductase domain-containing protein n=2 Tax=E... [more]
A0A835Z3C4_9STRA3.160e-6446.31Putative nitroreductase family n=1 Tax=Tribonema m... [more]
A0A484DVA5_BRELC5.180e-5842.57Nitroreductase domain-containing protein n=1 Tax=B... [more]
W4GD81_9STRA1.320e-5643.39Nitroreductase domain-containing protein n=3 Tax=A... [more]
A0A2D4CFG6_PYTIN6.650e-5641.45Nitroreductase family, putative n=2 Tax=Pythium in... [more]
A0A8K1CTI1_PYTOL2.190e-5542.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024U8C5_9STRA3.050e-5443.10Nitroreductase domain-containing protein n=2 Tax=A... [more]
A0A1V9ZJF0_9STRA8.910e-5442.04Nitroreductase family n=1 Tax=Achlya hypogyna TaxI... [more]
A0A6G0XIZ5_9STRA1.700e-5341.84Nitroreductase domain-containing protein n=1 Tax=A... [more]
A0A485L4K4_9STRA4.530e-5341.98Aste57867_15817 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig159contigP-littoralis_Contig159:140085..144458 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMQ3
PFAMsNitroreductase
Model size1590
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons7
Evalue1.17e-155
EggNOG OGsCOG0778@1|root,2RZ0D@2759|Eukaryota
DescriptionNitroreductase family
Cds size1017
COG categoryC
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig159.31.3prot_P-littoralis_Contig159.31.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig159 140634..144434 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789759.6796782-UTR-P-littoralis_Contig159:140084..1406331680789759.6796782-UTR-P-littoralis_Contig159:140084..140633Pylaiella littoralis U1_48UTRP-littoralis_Contig159 140085..140633 -
1680789759.7740502-UTR-P-littoralis_Contig159:144434..1444581680789759.7740502-UTR-P-littoralis_Contig159:144434..144458Pylaiella littoralis U1_48UTRP-littoralis_Contig159 144435..144458 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789759.6916475-CDS-P-littoralis_Contig159:140633..1408471680789759.6916475-CDS-P-littoralis_Contig159:140633..140847Pylaiella littoralis U1_48CDSP-littoralis_Contig159 140634..140847 -
1680789759.709515-CDS-P-littoralis_Contig159:141269..1413881680789759.709515-CDS-P-littoralis_Contig159:141269..141388Pylaiella littoralis U1_48CDSP-littoralis_Contig159 141270..141388 -
1680789759.7222326-CDS-P-littoralis_Contig159:141562..1416641680789759.7222326-CDS-P-littoralis_Contig159:141562..141664Pylaiella littoralis U1_48CDSP-littoralis_Contig159 141563..141664 -
1680789759.7308972-CDS-P-littoralis_Contig159:142127..1422011680789759.7308972-CDS-P-littoralis_Contig159:142127..142201Pylaiella littoralis U1_48CDSP-littoralis_Contig159 142128..142201 -
1680789759.743018-CDS-P-littoralis_Contig159:142691..1428401680789759.743018-CDS-P-littoralis_Contig159:142691..142840Pylaiella littoralis U1_48CDSP-littoralis_Contig159 142692..142840 -
1680789759.7532535-CDS-P-littoralis_Contig159:143198..1433671680789759.7532535-CDS-P-littoralis_Contig159:143198..143367Pylaiella littoralis U1_48CDSP-littoralis_Contig159 143199..143367 -
1680789759.762847-CDS-P-littoralis_Contig159:144244..1444341680789759.762847-CDS-P-littoralis_Contig159:144244..144434Pylaiella littoralis U1_48CDSP-littoralis_Contig159 144245..144434 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig159.31.3

>prot_P-littoralis_Contig159.31.3 ID=prot_P-littoralis_Contig159.31.3|Name=mRNA_P-littoralis_Contig159.31.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=339bp
MVSRVLRLRPEILGLCGRSRGASYTAAVASTLLLSLRNQGKGSAAMFSVC
SSVRRLHQDSNIQAEDDAGLSRFSSSSSSSPPEGLKAFRDIVTSRTAAFS
FSDEEIDPAVLRDIMALTQSAPSSFNIQPWSVVLVRDAATRKKLSTTMLG
GNTKKVLAAPVTAVFCADLEPSKRINRMVELSRRAGMAEADITKLSLAVN
LFSGEGLVGNVVRNAVTSIASPMQPAPEVGSAEAWSFKNTALAVQTYILS
CAAHGLDTAPMEGFDARRVRAALDIPDRYGIPMVVCTGYPAPQKASKSRE
SSGASSAKRWRYPAQEVVFDGAFGVGMAGIDPVVPKKL*
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mRNA from alignment at P-littoralis_Contig159:140085..144458-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig159.31.3 ID=mRNA_P-littoralis_Contig159.31.3|Name=mRNA_P-littoralis_Contig159.31.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4374bp|location=Sequence derived from alignment at P-littoralis_Contig159:140085..144458- (Pylaiella littoralis U1_48)
CACCCCACACCCCACACCCACGCCATGGTTTCGCGGGTGCTGCGGCTTCG GCCCGAAATTCTTGGTTTATGTGGTCGGAGCCGTGGTGCTAGTTATACAG CAGCGGTAGCATCCACATTGTTACTGTCCCTGCGAAACCAAGGTAAAGGT TCCGCAGCAATGTTCTCTGTCTGCTCGTCTGTTCGTCGTCTCCACCAAGA TTCCAACATCCAAGGTCAGCGGGCATTGATTGATGCACTGCTGTCGTACA CAGACAGACATCAGTTGTGTCAGGGTGTGTGCACAGCAGTGCACGATCGT GGGTTTGGCTTGATTCAGTAGGCGAAGGAGTTTGTGGCGTCGCCATCTCA CCGACGTGTACCGGTAGCACTGTACCTAAGCATGTGCGGCGGTTACCGGC ACTCCCTCCGGCATACAATGTACTGGATTACAGGCAGCTTACAGCAGCAC ACGCAGCAGTTTTGGTACACTTGTGTGGAATACACGTGGGATTGCTGTCC GTCGACAGCATGTGTAGAGGTAAAGGGCGACTGTTCCGTACACCTCTCTA GACCAGAGGCAAGATAGTTTGAAGTGGCGCTCTATATCCGGAAAAGGGAT GGAGGTGGACAGGGTCGATACCCGACGGAGTCACGAAGGTTCTTGAGAGA GAGGCCAAGGGCTGTGAGCTGTGAGACATTCTTAGAACTGCTGTACAAAT ACTTTCAAGTACAGGACACCAAGTTCGGTGCACTGACACCAAGTCCGGTG CACTGCTGTTTACACGTGATCCTGTCGATAGTCCGTGGATACATGTGTAC AGTGATCCGCTGACTTGTACGATACACCGAAGACTTTTGCTGTAATACCT GGTGCTCCATACGGTAGGTACCTCCGTACCTCCTTTTGTTCCATGTTTTC CCTGGATCTGTTGAGTGAGGACATAAACAGCCAGACCTATACTGCGTGTG GCTGTCCACACCGATCCATGCTCTCTACTACGGTATTTTATGCTTGCTTA TTTGATCACCATGCCGTGTTACCTCACCATCTGATGTGGAGGCTACAACA TTTCACCTGTGCGCGCTCCGTTTCGCACTTATTTACCGCAGCAGAAGATG ATGCCGGTCTCTCTCGCTTCTCCTCGTCGTCGTCGTCATCGCCGCCGGAA GGGCTCAAGGCTTTTCGAGACATCGTCACCTCGCGCACTGCGGCCTTTAG CTTCAGCGACGAGGAAATTGATCCCGCTGTCCTGCGTGACATCATGGCGC TGACGCAAAGGTGAGCGCAGGCGTCAGGATGACGATAATTTTCTACAGTA CTTTCGAGAGAGGTATGTTGAAGCTTATCGTTCGCCCTTGACACTCATCC ACTTCCGTACGAACTCCCGTGGTTCGCGTGTGCGTGCGACCAACCGCGAT TCAGGTCTATTTCAAATAAATTCGCGCCTACCTTGCTGCCGGATTGGGAA CTTGACGGATTATTGTATCGGACAAATTGTGCATGTATGTGTGGATATGA GTGGAAATACTCATCATGCCCATTCGACGCTCTGTTCTGGATTGTTTACG CAACACCTTGCTTGTCCTGGACGTGGCTTCGATCGGGACATCCCGTCTAT ACTGTATACCGCTACCAGCGCCCCCTCGTCCTTCAACATCCAACCCTGGA GCGTTGTTTTGGTTCGAGACGCTGCCACAAGAAAAAAATTGTCGACCACG ATGCTGGGCGGCAACACCAAGAAAGTTTTGGCGGCTCCTGTTACGGCCGT GTTTTGCGCCGATCTGGGTGAGGGTTTTAGTTCTTCTTTCAGATCGTCGG CACTCCATTTTTCGTCCACCACTTTGATGTTCGATATTTTACCTTCTCCT TCGCTAGAGTTTCTGCTCTTTATTCTGCTCTGCGATCATCACGAGAAACT GAACGAAAGAGACACTGATACATGCTGTTAGATTCAACTACCGCAGTGCT CTCTACTTTCTTCTCGTCGTTTGTGTGCGCTGACTTCTATGTAGCAGGAG ACTGATAACTTACACTTGAACGTACTGAAGCACGCCGCGTATGACAAAAT CCGTTTCATGTGCAAACAACCGTCGATCTGCAAAGATTGCACATTGAGAT TCAAACCGGCGCGATTGGGTGTGCAAGCCTAGAGTTTCGTTCAACGGAGC AGTGACCGCAAGTGCCCAGCGGAAGCGTTTGCTATGGGTATCAACAGCTG GCGTCCGATGACCCCATACACCCCCCGTTCCAACCCTTCCACCCGTGACC GTCCCAGAGCCATCGAAGCGCATCAACCGAATGGTGGAGTTGAGCCGACG GGCAGGCATGGCCGAGGCGGACATCACCAAGGTACGGCAATAATATGCAA ATCTCATGCCTCGTGTCGACAGAGAAGCCGTTGAATCGCTCCTCTTGACC AGGCAATTACGGTTCGCGGTTGTGTTCCGACTGCTTCTTGAACAGTCGAT GTATTTGGTAATGAACGCTTGCGCAGAGAGTGACGCGTGGTGCGCACAGT CAGCTGGCTGAGATATACACATCAAGTGTCAACAATGGTCCATGGAACTT CACTTTGTGACAACGGCATGCTGTCTTAGCTCAAAGCAGAGTGGCTCGTC AGGTTGCTTTGTGGAACATTCGCGTGCCAGTGTCACGCAAACGCCGGAAT CGAACGACCATAAAACAAAAACAAAATGTTTGGCGGGCAATTCGAATGAC GAGACCACAACTCGCCACAAGGATGTTTCGTTGCGTGATTTCGCGAGGTT GATGTGATGACTCGCACATTGTTTATTGTTGCTCGCCCCCTCAGCTTTCG CTGGCGGTGAATCTCTTCAGTGGGGAAGGCTTGGTCGGCAACGTCGTCAG GAATGCCGTCACTAGTATCGCCTCTCCCATGCAGCCTGCGCCTGAGGTGA GAGGACGGTAGCGTACCGGTCAAATAGGCGCGCCCGCCACTCGAATCAGT CGCTGCCACCAACGACAGCAAACGTTATCTAGCTAGCGTGGTGTTGGCGA CGTCCAATTATTATTTTCTGCACGTGTTTACGAGGTGTCCATCGCTTGCC GCGCTTATCCTTGACTAAAGGTTGGTTCCGCCGAGGCATGGTCCTTCAAG AACACCGCTCTGGCCGTCCAGACGTACATCCTTTCTTGCGCGGCGCACGG GCTCGACACAGCACCGATGGAAGGCTTCGATGCTAGAAGGTACCCACGAC ACGCGTGGCAAATGAACAGTATTTTACCAGGTTTCATGATTTTTTTTACT GTGCACGCCAGTGCTGCAATACTACAATTAGTCACGGATGTGACGGCAAC GCACCACACAGAGCACGGGCTAAACTAGAATGCATGCAAGCGGGTCTACA ATCGCGTCCGGTCAAGATGAAAAACTCGGGTGCTAATTAGAAGCCGAGCT TGCAGGAATGAAAGCAGATCCTACTCTGCGCGATGTTGCGCGGGAGCACG GGGGGTGAGACAAATGGCGCCTCCACGGGGCTTTGTGAACGGAAACGCGA CGAACCGCCGACATGAAAACACGAACAGTTATGACGTGATAGCTCGATGG ACATGGTAATGATGGGCATGTCTCGCCCTTCCCTCTGTTTCCCCTGCTCT CGTTTTTGCAGGGTCAGGGCTGCGCTTGATATTCCCGATCGATACGGCAT TCCCATGGTGGTCTGTACGGGCTACCCCGCACCGCAGAAGGCTTCAAAGA GCCGTGAAAGCAGCGGTGCGAGCTCGGCGAAGCGGTGGCGGTATCCGGCG CAGGAGGTCGTGTTTGACGGGGCTTTCGGGGTCGGCATGGCAGGGATAGA TCCGGTCGTACCAAAGAAGCTCTAGTTACCGCGGACAACATGCACTCAAT ATACTGTAGCCGACGGATAAAAATGAATCAACGAGGGTGTGGAATTTTGC GCTGTCGCCACCACTGAGCTTGTGAATGGCTTCTGTAGGATACCCGGCTT ACCGAAAAGCACTCTCGAAGCCAGTAAGCACGATTTTCGTTTTGAATAAG TACTCGTATCTGGTTCATGTTTTTACAGCTGTTAGGCCCCCTATTATGGC TCGAGTGTTGCCTTGGCTCCGACTTTATGAGAGGAGGAGGAGGAGGAGAG AAAGCATTTCCAATAGAATGCACGACATCTCCCTTGCTTTTCTCGACTCG AAGCCTTGTTAGGGCCTGTTTTAACGGAAAATGCGACACCCGGATTGGTC AATCAACTTCTGCATTCTGCGGGGCTAGCTTTCGCATCCCACGGGGCTAG GTTTTTCCTAAAAATAAATCAGCCTCTCGAGAGGTTGATTTTTGGAATCC GACGAATAGGAATTGGAATGGCCACGGGAGTTGGTGCGAGAAACGAAAGG CCTGTGAGGCGCACTCACACAAAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig159:140085..144458-

>mRNA_P-littoralis_Contig159.31.3 ID=mRNA_P-littoralis_Contig159.31.3|Name=mRNA_P-littoralis_Contig159.31.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1017bp|location=Sequence derived from alignment at P-littoralis_Contig159:140085..144458- (Pylaiella littoralis U1_48)
ATGGTTTCGCGGGTGCTGCGGCTTCGGCCCGAAATTCTTGGTTTATGTGG
TCGGAGCCGTGGTGCTAGTTATACAGCAGCGGTAGCATCCACATTGTTAC
TGTCCCTGCGAAACCAAGGTAAAGGTTCCGCAGCAATGTTCTCTGTCTGC
TCGTCTGTTCGTCGTCTCCACCAAGATTCCAACATCCAAGCAGAAGATGA
TGCCGGTCTCTCTCGCTTCTCCTCGTCGTCGTCGTCATCGCCGCCGGAAG
GGCTCAAGGCTTTTCGAGACATCGTCACCTCGCGCACTGCGGCCTTTAGC
TTCAGCGACGAGGAAATTGATCCCGCTGTCCTGCGTGACATCATGGCGCT
GACGCAAAGCGCCCCCTCGTCCTTCAACATCCAACCCTGGAGCGTTGTTT
TGGTTCGAGACGCTGCCACAAGAAAAAAATTGTCGACCACGATGCTGGGC
GGCAACACCAAGAAAGTTTTGGCGGCTCCTGTTACGGCCGTGTTTTGCGC
CGATCTGGAGCCATCGAAGCGCATCAACCGAATGGTGGAGTTGAGCCGAC
GGGCAGGCATGGCCGAGGCGGACATCACCAAGCTTTCGCTGGCGGTGAAT
CTCTTCAGTGGGGAAGGCTTGGTCGGCAACGTCGTCAGGAATGCCGTCAC
TAGTATCGCCTCTCCCATGCAGCCTGCGCCTGAGGTTGGTTCCGCCGAGG
CATGGTCCTTCAAGAACACCGCTCTGGCCGTCCAGACGTACATCCTTTCT
TGCGCGGCGCACGGGCTCGACACAGCACCGATGGAAGGCTTCGATGCTAG
AAGGGTCAGGGCTGCGCTTGATATTCCCGATCGATACGGCATTCCCATGG
TGGTCTGTACGGGCTACCCCGCACCGCAGAAGGCTTCAAAGAGCCGTGAA
AGCAGCGGTGCGAGCTCGGCGAAGCGGTGGCGGTATCCGGCGCAGGAGGT
CGTGTTTGACGGGGCTTTCGGGGTCGGCATGGCAGGGATAGATCCGGTCG
TACCAAAGAAGCTCTAG
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