prot_P-littoralis_Contig1582.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1582.1.1
Unique Nameprot_P-littoralis_Contig1582.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length98
Homology
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: Q9G920_OCHDN (NADH dehydrogenase subunit 9 n=1 Tax=Ochromonas danica TaxID=2986 RepID=Q9G920_OCHDN)

HSP 1 Score: 124 bits (310), Expect = 7.230e-34
Identity = 56/95 (58.95%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    4 VFPIIRSFSPGNEDT-IIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN 97
            + P+ + F   N++   I+SH NLL +LK LKLHINYQYKLL+CISG+DF + KYRF + YD+LSL NN+R+RVK+FVNEITP++S + IY N+N
Sbjct:   12 IVPVYQCFIHNNDEVCFIISHENLLHALKILKLHINYQYKLLTCISGIDFFSLKYRFCIAYDLLSLVNNSRVRVKIFVNEITPIESCVEIYKNAN 106          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: Q9MGA7_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Synura synuroidea TaxID=47573 RepID=Q9MGA7_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.030e-27
Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    1 MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN 97
            + ++ P I      NED II+   NL FSL CLK HINYQ+ LLS I+GVD + CKYRF V+YD+LSL+ N RLR+K+F+ E+  + S  +IY+NSN
Sbjct:    5 LKKIIPFIFFQKINNEDLIILLPKNLRFSLLCLKKHINYQFSLLSYIAGVDLLGCKYRFCVVYDLLSLSFNIRLRIKLFITEVNTIPSVTDIYVNSN 101          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A2E8YWY0_9ACTN (NADH-quinone oxidoreductase subunit C n=1 Tax=Nocardioides sp. TaxID=35761 RepID=A0A2E8YWY0_9ACTN)

HSP 1 Score: 95.9 bits (237), Expect = 1.060e-22
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:    2 NEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINC----KYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN 97
            N++ P + S    NE   +V   ++L  L+CL  HI +QYK+LSCISGVDF+      K RFGV+YD+LS+    R+RVK+F+ E+  V S I+IYIN+N
Sbjct:   21 NKIIPFVWSQKINNEIIYVVHKKHILLVLQCLNQHIKFQYKVLSCISGVDFLGTSIGNKCRFGVVYDLLSIFYKKRIRVKLFLKELDTVSSTISIYINAN 120          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A519UK29_9SPHI (NADH-quinone oxidoreductase subunit C n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A519UK29_9SPHI)

HSP 1 Score: 92.0 bits (227), Expect = 1.030e-21
Identity = 39/68 (57.35%), Postives = 55/68 (80.88%), Query Frame = 0
Query:   30 LKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN 97
            LK LK HINYQ+ LL+CISGVD +   YRF V+YD+LS+ NN+R++VK+FVNE+T V S++ ++ N+N
Sbjct:    5 LKVLKKHINYQFNLLTCISGVDLLGSSYRFSVVYDLLSIVNNSRIKVKIFVNEVTYVPSSVPVFHNAN 72          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A2U9GHX5_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Eunotia naegelii TaxID=1458866 RepID=A0A2U9GHX5_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.410e-20
Identity = 41/93 (44.09%), Postives = 65/93 (69.89%), Query Frame = 0
Query:    1 MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIY 93
            +  + PI R     NE +++++   L+  L  LKLH +YQ+K+L+CISGVD+   KYRF ++Y++LS+  NNRL+VK+FVNE+ PV S + ++
Sbjct:   14 LKRLCPIFRFQINENEVSLVLNDKLLVNVLLFLKLHCSYQFKILTCISGVDYSEKKYRFKIVYELLSIRYNNRLKVKIFVNELKPVPSVMGLF 106          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A8F0WH21_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Navicula veneta TaxID=138539 RepID=A0A8F0WH21_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.030e-20
Identity = 46/96 (47.92%), Postives = 66/96 (68.75%), Query Frame = 0
Query:    3 EVFPIIRSFSPGNEDTIIVSHTNLLF-SLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN 97
            ++FP I+     N++   +  TNLL  +L  +K H  YQ+K+L+CISGVD+ N  YRF V+Y++LSL  N+R RVK FVNEI PV+S  NI++ +N
Sbjct:    5 KIFPFIK-LEIFNKEPCFIVKTNLLDKALFLMKNHFKYQFKMLTCISGVDYPNNTYRFQVVYELLSLKFNSRTRVKCFVNEIIPVNSVENIFLGAN 99          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A0G3F649_PSEMU (NADH dehydrogenase subunit 9 n=5 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A0G3F649_PSEMU)

HSP 1 Score: 87.0 bits (214), Expect = 2.630e-19
Identity = 42/93 (45.16%), Postives = 64/93 (68.82%), Query Frame = 0
Query:    1 MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIY 93
            + +V PI++      E ++IV   +L+  L  LK HI YQ+K+L+CISGVD+ + KYRF V+Y++LS+  N RLRVKV  +E+TPV+S   ++
Sbjct:   13 ITKVLPILKIQIHQKEISLIVKREHLIPILMFLKNHIKYQFKILTCISGVDYPSQKYRFKVVYELLSVKYNARLRVKVLTDELTPVESCCKVF 105          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A8H2SII1_9STRA (NADH dehydrogenase subunit 9 n=2 Tax=Nitzschia TaxID=2857 RepID=A0A8H2SII1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.040e-18
Identity = 39/93 (41.94%), Postives = 62/93 (66.67%), Query Frame = 0
Query:    1 MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIY 93
            + ++ PI++     NE + I+   +L+  L   K HI YQ+K+L+CISGVD+ + KYRF ++Y++LS   N R+RVKV  NE+ P++S  NI+
Sbjct:   13 ITKILPILKIQIHQNEISFIIKRNHLIPVLLFFKNHIKYQFKILTCISGVDYPSHKYRFKIVYELLSARFNIRIRVKVMTNELIPIESCCNIF 105          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A8F0WGI4_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Tryblionella apiculata TaxID=1003145 RepID=A0A8F0WGI4_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.040e-18
Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = 0
Query:    1 MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIY 93
            + +V PI++      E ++IV   +L+  L  LK HI YQ+K+LSCISGVD+   KYRF V YD+LS+  N RLRVKV  NE+ P++S   +Y
Sbjct:   13 ITKVLPILKIQIHQKEVSLIVRRNHLIPVLLFLKNHIKYQFKILSCISGVDYPANKYRFKVAYDLLSVRYNIRLRVKVLTNELAPIESCECVY 105          
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Match: A0A5B8HVI3_9STRA (NADH dehydrogenase subunit 9 n=1 Tax=Haslea nusantara TaxID=2600302 RepID=A0A5B8HVI3_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.100e-18
Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    3 EVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGVDFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN 97
            ++FP I+     NE   +V    L  +L   K H  YQ+K+L+CISGVD+ N +YRF ++Y++LS+  N+R+RVK FVNE+ PV+S  +I++ ++
Sbjct:    5 KIFPFIKLEVFNNEYCFVVKTNLLSKALFLFKNHFKYQFKVLTCISGVDYPNNQYRFVIVYELLSIRFNSRIRVKCFVNELIPVESVQSIFLGAS 99          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1582.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q9G920_OCHDN7.230e-3458.95NADH dehydrogenase subunit 9 n=1 Tax=Ochromonas da... [more]
Q9MGA7_9STRA1.030e-2752.58NADH dehydrogenase subunit 9 n=1 Tax=Synura synuro... [more]
A0A2E8YWY0_9ACTN1.060e-2247.00NADH-quinone oxidoreductase subunit C n=1 Tax=Noca... [more]
A0A519UK29_9SPHI1.030e-2157.35NADH-quinone oxidoreductase subunit C n=1 Tax=Pedo... [more]
A0A2U9GHX5_9STRA2.410e-2044.09NADH dehydrogenase subunit 9 n=1 Tax=Eunotia naege... [more]
A0A8F0WH21_9STRA5.030e-2047.92NADH dehydrogenase subunit 9 n=1 Tax=Navicula vene... [more]
A0A0G3F649_PSEMU2.630e-1945.16NADH dehydrogenase subunit 9 n=5 Tax=Pseudo-nitzsc... [more]
A0A8H2SII1_9STRA1.040e-1841.94NADH dehydrogenase subunit 9 n=2 Tax=Nitzschia Tax... [more]
A0A8F0WGI4_9STRA1.040e-1847.31NADH dehydrogenase subunit 9 n=1 Tax=Tryblionella ... [more]
A0A5B8HVI3_9STRA1.100e-1842.11NADH dehydrogenase subunit 9 n=1 Tax=Haslea nusant... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitPFAMPF00329Complex1_30kDacoord: 21..94
e-value: 3.1E-8
score: 34.3
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyGENE3D3.30.460.80NADH:ubiquinone oxidoreductase, 30kDa subunitcoord: 6..97
e-value: 2.2E-12
score: 49.4
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilySUPERFAMILY143243Nqo5-likecoord: 11..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1582contigP-littoralis_Contig1582:893..1186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1582.1.1mRNA_P-littoralis_Contig1582.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1582 851..1404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1582.1.1 ID=prot_P-littoralis_Contig1582.1.1|Name=mRNA_P-littoralis_Contig1582.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=98bp
MNEVFPIIRSFSPGNEDTIIVSHTNLLFSLKCLKLHINYQYKLLSCISGV
DFINCKYRFGVIYDILSLTNNNRLRVKVFVNEITPVDSAINIYINSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001268NADH_UbQ_OxRdtase_30kDa_su
IPR037232NADH_quin_OxRdtase_su_C/D-like