mRNA_P-littoralis_Contig1577.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A496ZBS8_9DELT (UPF0102 protein DRH90_14980 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A496ZBS8_9DELT) HSP 1 Score: 67.0 bits (162), Expect = 6.220e-12 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 10 EKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSNKKGSHGKQLISPNEKTAAPCRSLF 225
E+ A YL++K YKV+E N + PVGEIDI+A D +T++FVEVKTRRS GS + I+P ++ +L+
Sbjct: 12 EELAVRYLKKKGYKVLEQNYTCPVGEIDIIARDKKTIIFVEVKTRRSMSYGS-ARLAITPRKQRKISMTALY 82
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A7X7ISK2_9BACT (UPF0102 protein GX621_17605 n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7ISK2_9BACT) HSP 1 Score: 67.0 bits (162), Expect = 9.580e-12 Identity = 31/62 (50.00%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 10 EKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSNKKGSHGKQLISPNE 195
E AA YLRR+RYK++ +V P GE+D+VA+D +T+VFVEVKTR+S+++G H + ++P +
Sbjct: 25 EALAARYLRRRRYKILGRHVRLPSGELDLVALDGKTIVFVEVKTRQSDRQG-HPSEAVTPEK 85
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A1F6GWG7_9BACT (UPF0102 protein A2798_02390 n=1 Tax=Candidatus Levybacteria bacterium RIFCSPHIGHO2_01_FULL_37_17 TaxID=1798588 RepID=A0A1F6GWG7_9BACT) HSP 1 Score: 64.7 bits (156), Expect = 4.600e-11 Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 1 RIREKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSNKKGSHGKQLISPNEKTAAPCRSLFETGRFE*PESSF*HRVGNLAGR 291
R+ EK AA YL ++ YK++E N GEIDI+A+DD+T+VFVEVKT+ SNK G+ + + K ++ E PE+ VG + +
Sbjct: 9 RLGEKLAAEYLEKQGYKIIERNFRKGWGEIDIIALDDKTLVFVEVKTKTSNKFGTPFEAMTPFKIKALERTAMFYKKLHPELPEALRIDAVGVVLSK 105
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A5C9CFH5_9BACT (UPF0102 protein FD138_1333 n=4 Tax=Planctomycetes TaxID=203682 RepID=A0A5C9CFH5_9BACT) HSP 1 Score: 64.7 bits (156), Expect = 6.040e-11 Identity = 30/47 (63.83%), Postives = 40/47 (85.11%), Query Frame = 1
Query: 10 EKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRS 150
E+AAA +L+R+ Y++V+ N STP+GEIDIVA+D T+VFVEVKTR S
Sbjct: 14 ERAAAKFLKRQGYRIVQRNYSTPLGEIDIVALDGTTIVFVEVKTRAS 60
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A1W9PW51_9DELT (UPF0102 protein B5M56_06055 n=1 Tax=Desulfococcus sp. 4484_241 TaxID=1968522 RepID=A0A1W9PW51_9DELT) HSP 1 Score: 63.2 bits (152), Expect = 1.910e-10 Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 10 EKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSNKKGSHGKQLISPNEKTAAPCRSLFETGRF 240
E AA +L ++ YK+V+ N TPVGEIDI+A D +T+VFVEVK RR+N+ G +P TA R + +T ++
Sbjct: 13 EDLAARFLAKRGYKIVDRNYRTPVGEIDIIAKDRKTMVFVEVKARRTNRFGG------APYSITADKKRKITKTAQW 83
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A2G6G1W7_9BACT (YraN family protein (Fragment) n=1 Tax=bacterium DOLZORAL124_64_63 TaxID=2044883 RepID=A0A2G6G1W7_9BACT) HSP 1 Score: 62.8 bits (151), Expect = 2.290e-10 Identity = 30/63 (47.62%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 1 RIREKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSNKKGSHGKQLISP 189
R EK A +YL+R+ Y+++ N TP+GE+DI+A D +T+VFVEVK RR+++ G H K ++P
Sbjct: 10 RKNEKLALDYLKRQGYRILTRNYRTPMGEVDIIAEDGQTIVFVEVKARRTDRFG-HPKVAVTP 71
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A3A0D4V3_9BACT (UPF0102 protein DCC67_18665 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0D4V3_9BACT) HSP 1 Score: 63.2 bits (152), Expect = 2.600e-10 Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 10 EKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRS 150
E+ AA +LRR+RYKVV T GEIDIVAVD RT+VFVEVKTRRS
Sbjct: 18 ERRAARHLRRQRYKVVATRRRLRYGEIDIVAVDGRTIVFVEVKTRRS 64
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A2E1KTR4_9PLAN (UPF0102 protein CMJ59_24375 n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E1KTR4_9PLAN) HSP 1 Score: 63.9 bits (154), Expect = 2.880e-10 Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 10 EKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSNKKGS 165
E AAA YL+RK ++V +V P+GEID+VA+DD TVVFVEVKTRRS + G+
Sbjct: 59 EAAAARYLKRKGLRIVGRSVRAPLGEIDLVALDDGTVVFVEVKTRRSMRTGT 110
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A2E7K7M1_9PLAN (UPF0102 protein CME32_05765 n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K7M1_9PLAN) HSP 1 Score: 62.4 bits (150), Expect = 4.850e-10 Identity = 30/72 (41.67%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 10 EKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSNKKGSHGKQLISPNEKTAAPCRSLF 225
E+AA YL++ RY+++ T +GEIDI+A+D TVVFVEVKTR+S KG + + +K +F
Sbjct: 15 ERAAVRYLKQHRYQILARQYRTELGEIDIIALDQETVVFVEVKTRKSTAKGQPFESVTGQKQKQLTRLAGVF 86
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Match: A0A7C3JRK1_9DELT (UPF0102 protein ENR91_03200 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C3JRK1_9DELT) HSP 1 Score: 62.0 bits (149), Expect = 5.610e-10 Identity = 30/72 (41.67%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 10 EKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSNKKGSHGKQLISPNEKTAAPCRSLF 225
EKAA ++L +K YK+VE N P+GEID++A+D R +VFVEVKTR G+ + ++ +K + F
Sbjct: 15 EKAAEHFLTKKGYKLVERNYRCPLGEIDLIALDGRVIVFVEVKTRSGEGFGTPSEAVVPWKQKKMIKAATFF 86 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1577.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1577.1.1 >prot_P-littoralis_Contig1577.1.1 ID=prot_P-littoralis_Contig1577.1.1|Name=mRNA_P-littoralis_Contig1577.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=82bp RIREKAAANYLRRKRYKVVETNVSTPVGEIDIVAVDDRTVVFVEVKTRRSback to top mRNA from alignment at P-littoralis_Contig1577:340..685+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1577.1.1 ID=mRNA_P-littoralis_Contig1577.1.1|Name=mRNA_P-littoralis_Contig1577.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=346bp|location=Sequence derived from alignment at P-littoralis_Contig1577:340..685+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1577:340..685+ >mRNA_P-littoralis_Contig1577.1.1 ID=mRNA_P-littoralis_Contig1577.1.1|Name=mRNA_P-littoralis_Contig1577.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=246bp|location=Sequence derived from alignment at P-littoralis_Contig1577:340..685+ (Pylaiella littoralis U1_48)back to top |