mRNA_P-littoralis_Contig156.126.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: Q8QN67_ESV1K (EsV-1-223 n=2 Tax=root TaxID=1 RepID=Q8QN67_ESV1K) HSP 1 Score: 149 bits (377), Expect = 3.000e-44 Identity = 76/128 (59.38%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 1 MSRRVAVACAIALGLKSLSASGASGAIVSFRL*VDRLLMGGILSNLIVVAVFEEIYWQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAHIMSMFFIMLPIVLKALER 384
MSRR+ C IA+ L+ L SG IVSFR +D L+GGILSNLI++ VF E+YWQ+D+ D HFGF S +DAYY+ VTSSSVGYGD+LP+T KAK+LTIAHI++MFF+MLP+V KALE+
Sbjct: 1 MSRRLFATCGIAIALRGLVVSGGVKEIVSFRPLIDTSLVGGILSNLILLVVFAELYWQLDQGD----DHTHFGFSSAIDAYYFSAVTSSSVGYGDLLPKTPKAKLLTIAHILAMFFVMLPVVAKALEK 124
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: Q7T6V0_9PHYC (Potassium channel protein n=7 Tax=Chlorovirus TaxID=181083 RepID=Q7T6V0_9PHYC) HSP 1 Score: 57.0 bits (136), Expect = 3.820e-8 Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 133 NLIVVAVFEEIY------WQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAHIMSMFFIMLPI 363
+L+V+A+F IY ++ + S A+ PD++ S +D Y+ V T S+VG+GDILP+T AK+ TIAHI+ +FFI+L +
Sbjct: 17 HLVVLAMFVTIYRFFPGGFENNFSVAN-PDKK----ASWIDCLYFGVTTHSTVGFGDILPKTTGAKLCTIAHIVMVFFIVLTL 94
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: KCV_PBCV1 (Potassium channel protein kcv n=15 Tax=Chlorovirus TaxID=181083 RepID=KCV_PBCV1) HSP 1 Score: 55.8 bits (133), Expect = 1.070e-7 Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 133 NLIVVAVFEEIY------WQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAHIMSMFFIMLPI 363
+L ++A+F IY ++ + S A+ PD++ S +D Y+ V T S+VG+GDILP+T AK+ TIAHI+++FFI+L +
Sbjct: 17 HLFILAMFVMIYKFFPGGFENNFSVAN-PDKK----ASWIDCIYFGVTTHSTVGFGDILPKTTGAKLCTIAHIVTVFFIVLTL 94
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: A0A1J0F9D0_9PHYC (Potassium ion channel protein n=1 Tax=Only Syngen Nebraska virus 5 TaxID=1917232 RepID=A0A1J0F9D0_9PHYC) HSP 1 Score: 55.1 bits (131), Expect = 2.120e-7 Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 1
Query: 133 NLIVVAVFEEIYWQV-----DRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAHIMSMFFIMLPI 363
+L+V+ +F IY + T +PD++ S +D Y+ V T S+VG+GDILP+T AK+ TIAHI+ +FFI+L +
Sbjct: 17 HLLVLMMFVMIYRFFPGGFENNFTVANPDKK----ASFVDCLYFGVTTHSTVGFGDILPKTTGAKLCTIAHIVVVFFIVLTL 94
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: A0A6C0F5P2_9ZZZZ (Ion_trans_2 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F5P2_9ZZZZ) HSP 1 Score: 54.3 bits (129), Expect = 4.620e-7 Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 124 ILSNLIVVAVFEEIYWQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAHIMSMFFIMLPIV 366
I+ N++++ +F IY Q++ E FGF +D +Y+ + T S+VGYGD +P+T +AK+ + H F I+L IV
Sbjct: 12 IIINILLIVLFGIIYGQMN---------EDFGFTQTIDPFYFSLTTLSTVGYGDFMPKTTRAKIAVMFH---QFIILLQIV 80
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: A0A7C5AGX5_9BACT (Ion_trans_2 domain-containing protein n=2 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7C5AGX5_9BACT) HSP 1 Score: 55.1 bits (131), Expect = 2.320e-6 Identity = 30/84 (35.71%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 100 VDRLLMGGILSNLIVVAVFEEIYWQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAHIMSMFFI 351
+++ L+ +++ + +AV ++W +R+ SP H G DA +++VVTSS+VGYGDI+PRT +++ +A I++ FFI
Sbjct: 1 MNKRLLIPLIAIAVSLAVNGWLFWHFERNA--SPP--HPGLTKPFDAVWWWVVTSSTVGYGDIVPRTTAGRLVGVATILAGFFI 80
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: A0A7T3FXG0_9EURY (Ion transporter n=1 Tax=Halosimplex litoreum TaxID=1198301 RepID=A0A7T3FXG0_9EURY) HSP 1 Score: 53.1 bits (126), Expect = 1.190e-5 Identity = 27/72 (37.50%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 124 ILSNLIVVAVFEEIYWQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAHIMS 339
+L+ L+V+ V +++ V+ +P+ EHFG DA+YY VVT S+VG+GDI+P TR + +T+ +++
Sbjct: 159 LLTVLVVLFVSAGLFYTVEHRA--NPNVEHFG-----DAFYYVVVTLSTVGFGDIVPVTRAGRWVTVTSVLA 223
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: M4QZP6_9PHYC (Ion_trans_2 domain-containing protein n=1 Tax=Micromonas pusilla virus 12T TaxID=755272 RepID=M4QZP6_9PHYC) HSP 1 Score: 50.1 bits (118), Expect = 1.260e-5 Identity = 27/68 (39.71%), Postives = 38/68 (55.88%), Query Frame = 1
Query: 127 LSNLIVVAVFEEIYWQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAH 330
+ NLI+++ I + S + HF F SVLD +Y+ T SSVGYGDI P+T AK+L +
Sbjct: 1 MRNLIIISTLFGIIYS-------SLEPGHFQFKSVLDPFYFSFTTMSSVGYGDITPKTNLAKVLVMCQ 61
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: UPI000A2A894F (potassium voltage-gated channel protein Shal n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A894F) HSP 1 Score: 51.6 bits (122), Expect = 5.260e-5 Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 115 MGGIL-SNLIVVAVFEEIYWQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKML 318
+GGIL S L ++ VF I + V+ AD+PD GF S+ A++Y +VT +++GYGD+ P T K++
Sbjct: 312 LGGILFSFLALMVVFSSIIYFVEDGGADNPD----GFTSIPSAFWYTLVTMTTLGYGDMYPTTTVGKLI 376
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Match: A0A7D5PC80_9EURY (Potassium channel family protein n=2 Tax=Halosimplex TaxID=171163 RepID=A0A7D5PC80_9EURY) HSP 1 Score: 50.8 bits (120), Expect = 7.860e-5 Identity = 26/72 (36.11%), Postives = 46/72 (63.89%), Query Frame = 1
Query: 124 ILSNLIVVAVFEEIYWQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSSSVGYGDILPRTRKAKMLTIAHIMS 339
+L+ L+V+ V +++ + T +P EHFG DA+YY V+T S+VG+GDI+P TR + +T+ +++
Sbjct: 159 LLTVLVVLFVSAGLFYAAE--TRANPGVEHFG-----DAFYYVVITLSTVGFGDIVPVTRPGRWVTVISVLA 223 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig156.126.1 >prot_P-littoralis_Contig156.126.1 ID=prot_P-littoralis_Contig156.126.1|Name=mRNA_P-littoralis_Contig156.126.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=91bp MGGILSNLIVVAVFEEIYWQVDRSTADSPDQEHFGFGSVLDAYYYFVVTSback to top mRNA from alignment at P-littoralis_Contig156:373502..373888- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig156.126.1 ID=mRNA_P-littoralis_Contig156.126.1|Name=mRNA_P-littoralis_Contig156.126.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=387bp|location=Sequence derived from alignment at P-littoralis_Contig156:373502..373888- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig156:373502..373888- >mRNA_P-littoralis_Contig156.126.1 ID=mRNA_P-littoralis_Contig156.126.1|Name=mRNA_P-littoralis_Contig156.126.1|organism=Pylaiella littoralis U1_48|type=CDS|length=273bp|location=Sequence derived from alignment at P-littoralis_Contig156:373502..373888- (Pylaiella littoralis U1_48)back to top |