prot_P-littoralis_Contig156.103.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig156.103.1
Unique Nameprot_P-littoralis_Contig156.103.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length282
Homology
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BLAST of mRNA_P-littoralis_Contig156.103.1 vs. uniprot
Match: A0A6H5JNX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX1_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 2.530e-44
Identity = 78/173 (45.09%), Postives = 107/173 (61.85%), Query Frame = 0 
Query:    1 MASKNIFAATTTPSKRSASDIKREVVGNCIVPACNGADVTRHSPTFGGCSNFEKSGCKFKISILTAPSVCITCHGSINPGVKCLGVPHPTAERGPTGRVVYINNHLEWDQCLGARIAV--RGKDVCKFVEPTEEGDERVEKPCERCSEFIAVGDFIISAWRSVTTPLLPRATP 171
            MAS+NIFAAT   SKR  +    EV+G C    C+ A+VTR S TFGGC N+  SGC++KISIL+A + C+TC   +NPGV CLGVP+    +   G+  Y+N HL W+ CLG ++ +   GK   KF+E  ++ D R+  PC RC++ I  GDF+IS ++      LP   P
Sbjct:    1 MASRNIFAATPPSSKRKTA----EVLGKCA--RCDNAEVTRCSATFGGCENYNSSGCRYKISILSAAARCVTCLADVNPGVLCLGVPNLKGTKNTRGKTAYVNTHLRWEDCLGQKVKLGKEGKSAFKFIERVDQEDSRIGVPCARCTDEIVEGDFVISTYQPDAENPLPANNP 167
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNX1_9PHAE2.530e-4445.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig156contigP-littoralis_Contig156:321206..324491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig156.103.1mRNA_P-littoralis_Contig156.103.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig156 320399..324922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig156.103.1 ID=prot_P-littoralis_Contig156.103.1|Name=mRNA_P-littoralis_Contig156.103.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=282bp
MASKNIFAATTTPSKRSASDIKREVVGNCIVPACNGADVTRHSPTFGGCS
NFEKSGCKFKISILTAPSVCITCHGSINPGVKCLGVPHPTAERGPTGRVV
YINNHLEWDQCLGARIAVRGKDVCKFVEPTEEGDERVEKPCERCSEFIAV
GDFIISAWRSVTTPLLPRATPFTPSSAPGRCLTTTSTNLLTPCSSRGSRT
KQSTPPPSTSTFEIHPSHRNPFYPRPRSRVIPTRTRTVAGSRPRGLHSRF
IVVSRRVRRVPTLSASILFGGRVFLARRFPC*
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