mRNA_P-littoralis_Contig156.72.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: A0A6H5K976_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K976_9PHAE) HSP 1 Score: 240 bits (613), Expect = 2.670e-66 Identity = 165/444 (37.16%), Postives = 239/444 (53.83%), Query Frame = 2
Query: 272 RSPRLGLLSGAVSTMVLAISLFRVMLSPAQAAQIVEGTVV--EIITLPAVCACFTCAYGLRAFRLLIMYNPHMRKRWGTILG-ESAMVKLLLAIYIVMEVVA----------------------------------WSASLV--------FGVDRIADCAFAVSMSGALLTIGMCFTFVGSIRKIDDIFDLSLELQRVGAFALAFL--LLGYPIRYLPFRFQRYNFILCLLLRYPSAVWFTNIQPTKALLRQKPWYNRSEGIIHSLFPTVP-QKMVNKVAV-LARESTLLSPRSSKLLASLPVGTDMTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQESAGSHDGVFKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANFKETSSDTIAHILDDATKEIAKMLQDNLYHKFKATKQFQHINNMLFSAEA 1456
RSP LG +SG V A + +++ +++V + IIT+P V F AY +R RLL+MYNPHMR RWG E+ MVK+++ +++V+++V+ W +L F R+A AV LLTIG VG + + D+FD+S+E++ VG FAL L L+G I +P + IL L R+ +AVW TNIQP + +L+++ + + G I SLFP VP VA+ + ES + + SS S+ + + +L FPPLLEA EFC+KALCSESL FL F SL S +D +F F IVD YI+D ++FE+N++ +TK + L+ ++FKE D ILD A KEI KMLQ+NLY+KF++T+QF+ I +ML+SAEA
Sbjct: 51 RSPLLGTVSGLAGVSVWAFATTGAVIN----SEVVNAQLAFAPIITVPLVLVAFVGAYIIRGIRLLVMYNPHMRHRWGRYFNKETFMVKVVIVLFVVLQLVSSLAXXXXXXXXXXXTGDDNTMLGETFHEALQAMRWLTTLFTELLIRIKFAAYRVAGAMIAVIAVDMLLTIGASLMLVGKLARTKDMFDMSVEIRSVGGFALLALGELMGIVIPMVPATVLNFYLILFLTTRFGTAVWITNIQPVRKVLQRRADHPINAGGIASLFPYVPWTTRSGAVAIDVMNESKVFTKPSSSKFTSVKLDDKLEEILRFPPLLEAFGEFCRKALCSESLMFLTAGKDFHESLDASDADYDTIFARFNEIVDQYIRDGSSFEVNIESKTKAQILSRTSMSSFKELPLDDAVCILDLAVKEIGKMLQENLYNKFRSTEQFKEIKDMLYSAEA 490
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI) HSP 1 Score: 234 bits (596), Expect = 1.730e-64 Identity = 149/423 (35.22%), Postives = 231/423 (54.61%), Query Frame = 2
Query: 194 TVIFVAISISHMTVAWKLRKDLSVAVRSPRLGLLSGAVSTMVLAISLFRVMLSPAQAAQIVEGTVVEIITLPAVCACFTCAYGLRAFRLLIMYNPHMRKRWGTILG-ESAMVKLLLAIYIVMEVVAWSASLVFGVDRIADCAFAVSMSGALLTIGMCFTFVGSIRKIDDIFDLSLELQRVGAFALAFLLLGYPIRYLPFRFQRYNFILCLLLRYPSAVWFTNIQPTKALLRQKPWYNRSEGIIHSLFPTVP-QKMVNKVAVLARESTLLSPRSSKLLASLPVGTDMTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQESAGSHDGVFKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANFKETSSDTIAHILDDATKEIAKMLQDNLYHKFKATKQFQHINNMLFSAEA 1456
T ++ +++SH++ W LRKD AVRSP L SG + + ++ R ++ P + + + I ++P C AY LR R+++MY P R+RWG L E+AMVK+LL Y+++EV AW G+ R+A V ++T+ G +R+ D+F +SLE+QR GA AL ++ + +P + +L +R+ +W TNIQP + L ++ + GI+ LFP VP +K VA+ + E +L+ + +++ + M +L P LLEA +EFC+KALCSES+ FL A F S+ S + D F F I D YIKD + FEIN++ +TK + ++ FK+ D A LD A KE+ KML++NLY KF+ T QF+ I +LFS +A
Sbjct: 17 TNVYCLVTLSHISATWVLRKDFYFAVRSPVLMTASGLAGVLAGSTAVSRTVMFPGLRSLFI----LRIFSIPLTALCLVVAYILRGLRVIVMYTPSRRQRWGRYLKKEAAMVKVLLTAYVIVEVAAWIVVRHVGLARVASFMVTVVKIDTVVTLSASLALFGQLRRTQDVFKVSLEIQRAGACALLTSVMIMFLGSIPAGVLEFYLVLFYTVRFHVILWLTNIQPARERLGRRDATPNTRGIMAKLFPYVPWRKHGGTVAIDSAECMVLAASTHCSKSTVKLDDAMEEILRCPVLLEAFEEFCRKALCSESILFLKAAWAFNDSVYASTANEDTNFALFMDIFDKYIKDGSPFEINIESKTKSFIMKRTDKEAFKQLRLDDAARGLDAAAKEVGKMLKENLYDKFRQTDQFKQITGVLFSTKA 435
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI) HSP 1 Score: 173 bits (439), Expect = 4.480e-42 Identity = 147/485 (30.31%), Postives = 244/485 (50.31%), Query Frame = 2
Query: 131 STALEEWVWYEVVLSAVMLTATVIFVAISISHMTVAWKLRKDLSVAVRSPRLGLLSGAVSTMVLAISLFRVMLSPAQAAQIVEGTVVEIITLPAVCACFTCAYGLRAFRLLIMYNPHMRKRWGTILGESAMVKLLLAIYIVMEVVAWSASLVFGVDRIA----DCAFAVSMSGALLTIGMCFTFVGSIRKIDD-IFDL---SLELQRVGAFALAFLLLGYPIRYLPFR--------------------------FQRYNFILCLLLRYPSAVWFTNIQPTKALLRQK--------PWYNRSEGIIHSLFPTVP--QKMVNKVAVLARESTLLSPRSSKLLASLPVGTDMTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQESAGSHDGVFKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANFKETSSDTIAHILDDATKEIAKMLQDNLYHKFKATKQFQHINNMLFSAE 1453
+TA W ++ + V+L+ TV+F +S+S+ +LRK+ +A+RSP L ++SGA+ ++ + + L+ +A G +I+ +P + + FT Y LR RLLIM+ P R+RWG+ L E + ++LAI++V++VV WS +GV +C + +S + + +C G+ R F+ S+ + GA A L + L FR R + ++ +++R+ +A+W TNI+P + +LRQ PW FP VP + KVAV E T+ +S+ L+++ +G T+ ++ PPLLEA FCQKALC ES+ L E FR S+ D +FK+F IV+ +IK +++E+N+D R + + +EA FKE +D A I A + ++ML DNL KF+AT+++Q I L + +
Sbjct: 60 ATAFAPRSWLQLFIDVVILSYTVVFSLVSLSYCAAMGQLRKEFFIALRSPMLAVMSGAIGILISGPEIIGMTLTYDMSA----GPE-KILCVPLMLS-FTATYILRGVRLLIMFTPRSRQRWGSFLRERNFIPIVLAIFLVLQVVVWSFVPTYGVPIKCWIQHNCVKSQGIS-FVWNMLVCVPRAGTTRTNGHPSFNCRWCSVLREAPGALPRATLFTCLHLSILNFRSVWCCECLDAAMVMGMKAAGEFYTPTLMRMHMVVFMVVRFHTALWITNIKPVREVLRQSSDRKDYHVPW-----------FPYVPWRRSASGKVAVGMNE-TMHVTCTSRPLSTIQLGRLETI-INTPPLLEAFDSFCQKALCGESILLLREVAAFRDSIYAVEADDDALFKEFVAIVNKFIKSGSSYEVNIDCRARTGVMRDVDEARFKELDTDGRADIFTLAETQTSQMLADNLLAKFQATERYQRIAEGLLAID 524
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: A0A6H5JLE7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE7_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.860e-34 Identity = 105/303 (34.65%), Postives = 154/303 (50.83%), Query Frame = 2
Query: 599 RIADCAFAVSMSGALLTIGMCFTFVGSIRKIDDIFDLSLELQRVGAFALAFLLLGYPIRYLPFRFQRYNFILCLLLRYPSAVWFTNIQPTKALLRQKPWYNRSEGIIHSLFPTVPQKMVNKVAVLARESTLLSPRSSKLLASLPVGTDMTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQE-----SAGSHD-----GV--------FKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANFKETSSDTIAHILDDATKEIAKMLQDNLYHKFKATKQFQHINNMLFSAE 1453
RIA V ++ LLT+G G +RK D+FD+SLE+Q+VG FA+A L + Y+ + L PS +NIQP +A L + P + G I LFP +P V S L ++ AS GT + L++ FPPL +A ESL FLV+A++F SL SAG+ GV F+ FA IVD YI++ + FE+N++ + + L + A+F+ + D H+LD ATK+++ ML++NLY KF+ T+QF+ I LFS E
Sbjct: 10 RIAYFTLGVVVADTLLTLGASLVLFGKLRKTKDVFDMSLEIQKVGIFAMAAL-------------ECYHAVKDLSTVGPSQA-RSNIQPVRAALLRGP-AKETVGFISLLFPYIPWTKHGSRKVAVEASYTLRSQA----ASSAGGTVLDLIIQFPPLFQACLSPVSDCAFVESLMFLVDADEFNCSLHAVSKFTSAGADPSPAAMGVVECEENLNFEQFAAIVDKYIREGSPFEVNIESKIRDEILREVDRASFRRLTLDEKVHLLDKATKQVSNMLRENLYLKFRETEQFKQIQEQLFSVE 293
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: A0A6H5KX00_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX00_9PHAE) HSP 1 Score: 141 bits (355), Expect = 3.770e-32 Identity = 116/423 (27.42%), Postives = 190/423 (44.92%), Query Frame = 2
Query: 158 YEVVLSAVMLTATVIFVAISISHMTVAWKLRKDLSVAVRSPRLGLLSGAVSTMVLAISLFRVMLSPAQAAQIVEGTVVEIITLPAVCACFTCAYGLRAFRLLIMYNPHMRKRWGTILGESAMVKLLLAIYIVMEVVAWSASLVFGVDRIADCAFAVSMSGALLTIGMCFTFVGSIRKIDDIFDLSLELQRVGAFALAFLLLGYPIRYL---PFRFQRYNFILCLLLRYPSAVWFTNIQPTKALLRQKPWYNRSEGIIHSLFPTVPQKMVN-KVAVLARESTLLSPRSSKLLASLPVGTDMTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQESAGSHD----GVFKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANFKETSSDTIAHILDDATKEIAKMLQDNLYHKF 1402
Y V + +L A ++ + + + W LR++ + +RSP L G T+ + +F L + + V +I PA+ A + A RLL+M+ P +R +WG E +V L+ YI+ME WS G+ R + + T+ G + K+DD+ +S +++ VG L + + YL P +Q L LL +P VW NI+P + R P RS H P + N +V V A E P + + + +T +++F PL EA EFC+++LC ES QFLV+ +F+ + +SA G F + IV+ YIKD + E+N+ TK+ + + A + + + A +EI +L DNL +KF
Sbjct: 6 YVVAIDIFILAAATVYSFVCLGFVAAMWSLRRNFFIVLRSPLLACTLGLCITLRFEVLIFAHTLHWGHSGLVASDGVTSLIEFPALLIS-EFALVMSAVRLLVMFFPKLRAKWGRFTRERDLVYGLVCAYILMEGALWSGVAAVGLSRTVGVLVTLELFTGSTTVVAGVLLGGRLNKVDDLLHMSTDIRVVGTILLLMTCVHKGLPYLSMSPTEYQYCKITLTALL-HPPIVWLINIRPVLEVGRNIPARRRSRKSFHLPSPFRRRSTKNIRVGVAADEDINTLPWNGEAYLN---DNRLTSIMNFQPLREAFGEFCRRSLCGESFQFLVDVEEFKDLIADSAAETSEKSFGGFGGYLAIVNDYIKDGSHSEVNIASTTKRSIMQYMKFAAYAALQLEERKDLFGPAEREIKIVLADNLLNKF 423
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: D8LTR6_ECTSI (Developmental regulator FlbA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR6_ECTSI) HSP 1 Score: 140 bits (354), Expect = 5.080e-32 Identity = 114/423 (26.95%), Postives = 190/423 (44.92%), Query Frame = 2
Query: 158 YEVVLSAVMLTATVIFVAISISHMTVAWKLRKDLSVAVRSPRLGLLSGAVSTMVLAISLFRVMLSPAQAAQIVEGTVVEIITLPAVCACFTCAYGLRAFRLLIMYNPHMRKRWGTILGESAMVKLLLAIYIVMEVVAWSASLVFGVDRIADCAFAVSMSGALLTIGMCFTFVGSIRKIDDIFDLSLELQRVGAFALAFLLLGYPIRYL---PFRFQRYNFILCLLLRYPSAVWFTNIQPTKALLRQKPWYNRSEGIIHSLFPTVPQKMVN-KVAVLARESTLLSPRSSKLLASLPVGTDMTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQESAGSHD----GVFKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANFKETSSDTIAHILDDATKEIAKMLQDNLYHKF 1402
Y + + +L A ++ + + + W LR++ + +RSP L G T+ LF L + + V +I P V A + A RLL+M+ P +R +WG E +V L+ YI+ME WS GV R + + T+ G + K+DD+ +S +++ VG L + + Y+ P ++ Y +L + L +P VW TNI+P + + R P RS P N +V V A E+ P + ++ +T +++F PL EA EFC+++LC ES QFLV+ +F+ + +SA G F + +V+ YIKD + E+N+ TK+ + + + + I A +EI +L DNL +KF
Sbjct: 6 YVLAIDIFILAAATVYSFVCLGFIAAMWSLRRNFFIVLRSPLLACTLGLCITLRFEFLLFAHTLHWGHSGLVASHGVTNMIEFP-VLLISEFALVMSAVRLLVMFFPKLRAKWGRFTREKDLVYGLVCAYILMEGALWSGVAAVGVSRTGGVLATLELFSGSTTVVAGVLVGGRLNKVDDLLHMSTDIRVVGMLLLLMSCVHAGLHYVSMSPMEYKYYTIVL-MALSHPPIVWLTNIRPVREVERNIPARRRSRKDFQLPSPYRRWSTKNIRVGVAADENNNSLPWNGEVYLD---DNRLTSIMNFQPLREAFGEFCRRSLCGESFQFLVDVEEFKDLIADSAAEETEKSFGGFGGYLAVVNDYIKDGSHSEVNIASTTKRSIMQHMKFTAYAALKLEDRKDIFGPAEREIKIVLADNLLNKF 423
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: D7FN97_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN97_ECTSI) HSP 1 Score: 131 bits (330), Expect = 3.600e-31 Identity = 75/199 (37.69%), Postives = 114/199 (57.29%), Query Frame = 2
Query: 911 GIIHSLFPTVPQKMVNKVAVLARESTLLSPRSSKLLASLPVGTDMTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQ------------ESAG------SHDGVFKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANFKETSSDTIAHILDDATKEIAKMLQDNLYHKFKATKQFQHINNMLFSAE 1453
I SLFP +P + V S L +S AS GT + L++ FPPL +A +E+C+ ALCSESL FLV+A++F ++L ESA H+ F+ FA IVD YI++ + FE+N++ + + L + A+F+ + D H+L+ ATK+++ ML++NLYHKF+ T+QF+ I LFS E
Sbjct: 2 SFISSLFPYIPWTKHERSKVAVEASYTLRSQS----ASSAGGTVLDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFSTAGKDPESAAVAVNECEHNPNFEQFAAIVDKYIREGSPFEVNIESKIRNEILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFSVE 196
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: A0A6H5JIZ3_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ3_9PHAE) HSP 1 Score: 137 bits (344), Expect = 1.150e-30 Identity = 118/439 (26.88%), Postives = 213/439 (48.52%), Query Frame = 2
Query: 167 VLSAVMLTATVIFVAISISHMTVAWKLRKDLSVAVRSPRLGLLSGAVSTMVLAISLFRVMLSPAQAAQIVEGTVVEIITLPAVCACFTCAYGLRAFRLLIMYNPHMRKRWGTILGESAMVKLLLAIYIVMEVVAWSASLVFGVDRIADCAFAVSMSGALLTIGMCFTFVGSIRKIDDIFDLSLELQRVGAFALAFLLLGYPIRYL--PFRFQRYNFILCLLLRYPSAVWFTNIQPTKALLRQKPWYNRSEGIIHSLFPTVPQKMVNKVAVLARESTL--LSPRSSKLLASLPVGTD-MTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQES---------------AGSHDGVFKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANFKETSSDTIAHILDDATKEIAKMLQDNLYHKFKATKQFQ 1423
V+ A++L + + IS+ ++ W LRK+ + +RSP L SG T+ ++++ ++L ++ +I PA+ A L A RL +MY P R ++G + E L A Y+++E+V W A+ + G R+A ++ A +T+ +++I D+ ++ +++ VG L L + IR L +Y F++ + + +P VW NI+P + +L P + +G+ L ++ + + E+ +S S+ V ++ + ++++ PL EA EFCQK+LCSES QFL++A++FR + E A +H D A +V+ YIKD A EIN+ TK+ + +A+ F D I A +EI ++L+DNL +F A+ Q++
Sbjct: 7 VIDALILVFSSAYALISLGYVATMWHLRKNFFIVLRSPILACTSGLGITVRYIVTIYGLVLGR-------NLEILNLIGFPALLIA-EIAVILTALRLFVMYYPSTRAKYGRVTREKPWACGLAATYLLVEMVVWLAAAMQGTKRVAVVMTNLAPLSAFVTLMAVVCLGRQLKRIHDLSNMGRDIRLVGIILLICLPVFTAIRVLWGSILAFKYFFVIFITISHPPIVWILNIRPIQEVLHHAPRNSIPKGV-QVLLALSSRRRGGITSTIVGEAVTPDVSQNPSRHSRESYVESNRLAGIMNYLPLREAFGEFCQKSLCSESFQFLLDASEFRGVIVEGPVDGDANGSAEEENEAPTHTSGLGDVATMVNEYIKDGAPSEINIGSDTKRDIMELAKVEAFASLDQDARLLIFVQAEREIRRILEDNLMARFLASAQYK 436
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: A0A6H5KBN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBN3_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 3.110e-15 Identity = 57/158 (36.08%), Postives = 95/158 (60.13%), Query Frame = 2
Query: 128 TSTALEEWVWYEVVLSAVMLTATVIFVAISISHMTVAWKLRKDLSVAVRSPRLGLLSGAVSTMVLAISLFRVMLSPAQAAQIVEGTVVEIITLPAVCACFTCAYGLRAFRLLIMYNPHMRKRWGTIL-GESAMVKLLLAIYIVMEVVAWSASLVFGVD 598
+ST+ + + + L V+++ V F ++SH++ AW+LRKD +VRSP L SG V ++ A ++ R+++ P + +V ++ II +P + F Y +R RLL+MYNP R WG E A+VK+LL + ++EV+AWSA L+FG++
Sbjct: 14 SSTSRNHKMGHIIALDVVLMSMLVGFTLTALSHISAAWRLRKDFFFSVRSPLLATTSGLVGVVLGAFAVARLIVIPDK---LVVHSISLIIFVPLMELGFLGPYVMRGIRLLVMYNPATRTHWGRFFTSELAVVKILLVAFGIVEVIAWSAVLLFGLE 168
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Match: A0A6H5K6R2_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R2_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 6.860e-15 Identity = 57/159 (35.85%), Postives = 79/159 (49.69%), Query Frame = 2
Query: 851 TNIQPTKALL---RQKPWYNRSEGIIHSLFPTVPQK---MVNKVAVLARESTLLSPRSSKLLASLPVGTDMTLMLSFPPLLEALQEFCQKALCSESLQFLVEANKFRTSLQESAGSHDGVFKDFAGIVDTYIKDNAAFEINVDYRTKKRFLAVAEEANF 1309
+NIQ +A + R++ YN GII SL P +P + + V + R T + S+ + + +L F PLLEA +EFCQKALC ESL FL FR S+ S S DG F IV Y++ + FE+N+D +TK L F
Sbjct: 7 SNIQSIRASVLPRRRRNNYNNG-GIIASLLPYIPWREDASIVAVDAVGRRFTSRGVSLGNINRSVKLDDALEQILCFTPLLEAFEEFCQKALCIESLMFLKAVMGFRGSVHASTASDDGNFTLLTDIVQKYVQSGSPFEVNIDSKTKSNILVKITRETF 164 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.72.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig156.72.2 >prot_P-littoralis_Contig156.72.2 ID=prot_P-littoralis_Contig156.72.2|Name=mRNA_P-littoralis_Contig156.72.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=459bp MNTSVVASNTSTALEEWVWYEVVLSAVMLTATVIFVAISISHMTVAWKLRback to top mRNA from alignment at P-littoralis_Contig156:242770..249951+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig156.72.2 ID=mRNA_P-littoralis_Contig156.72.2|Name=mRNA_P-littoralis_Contig156.72.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7182bp|location=Sequence derived from alignment at P-littoralis_Contig156:242770..249951+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig156:242770..249951+ >mRNA_P-littoralis_Contig156.72.2 ID=mRNA_P-littoralis_Contig156.72.2|Name=mRNA_P-littoralis_Contig156.72.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1377bp|location=Sequence derived from alignment at P-littoralis_Contig156:242770..249951+ (Pylaiella littoralis U1_48)back to top |