mRNA_P-littoralis_Contig156.12.8 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig156.12.8 vs. uniprot
Match: A0A6H5KRJ0_9PHAE (MRG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ0_9PHAE) HSP 1 Score: 403 bits (1035), Expect = 2.060e-111 Identity = 904/1899 (47.60%), Postives = 1002/1899 (52.76%), Query Frame = 2
Query: 542 MPAKKLEKEPGKSATTAPPKRLGLSDKTAQAVFVDTEVLLEPEMVGRSGSDAYGWAAGKYYAVAPYAADGVVSRCGKDGKEMAVRFEIRDMTAGGEGMQLSVTECKKVQKSQYYFFQAVEFLLPGKFLFVFSAKSTKYPDIEPVQYSITVKAPASLKTSSSWTSG----------------VMNGGSGTKSKGSSRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQKKLEXXXXXXXXXXXXXXXXXXXXXXXXXMTKKSASMSGEASGASRAGSAGVGDTQQGIGIRKRVGGGGGARAEGMHGGLSSPLSSAQDKTKKKMRLPAPTPVATPKGRGPPTPALLPTGISADRGGSAAISGQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGDATEQGGKGKGPRWKGAAAKGRAPPAVPXXXXXXXXTKGXXXXXXXXXXXXXXXXXXXXXXXXXXQSGSPAPFSGRAASSTTAQTKKRPRPDEGGESNAPAVTGVGGGVGGVGPSAGRDSSTNGVQKKRQKRTPTVKKAPPAKSKVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAGAAGATGASNTPR--------------------------ACAVGANXXXXXXXXXXXXXXXXXXXXXGGAGRGVKSG-VSYPWPP-GLGTSPAEEEKGHAGVHPKLPGGRLFPVFYKAQTS---------------------------GGAGSAEAGGATSKSIAKKTGKAXXXXXXXDKASPAKTAQATPRKTPATGAVGKGASNSKPASKAANRKAANSKVTLATKRAAATLSSIGGGKAXXXXXXXXXXXXXXXXXXXXGRGXXXXXXXXXXXXXXXKAVSTPTTTEAGSAGGTHAIAATXXXXXVTXXXXXXXXXXXXXXXXXXPKXXNLQXXXXXXXXXXXXXLSIATGXXSGDGGGVDSGPLGLPKAG-KGKNKS-TVPGSPKASKSKIGSPSPRPGSGDISGGSESFSAKPG-GGVAPGIVRELV-KVAEAAKTAVAAGGEAPTNLVIPKARGRPPTPGGKNALKRESLLKKLMEDQVGKLDQVEKAG--GAADTAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----GKAKNKIKDKDTKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNEDGGGGRGGDAN-TAGPSKKTTGDDKPETPAPKGKGQGKPKNLATPAAGRHPTAPGSXXXXXXXXXXXXXVDGGTKTPASKLPSGASSSVKAKANKKGKKAAEIGTVGERKEEVRSDGVTEKLLEAKRREKLEKQEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKKWAWMGGAWGKDKDHLMELDGSVMEEGTLPQTFSSYDGEFEVDIPAGLFGIILDDTRAILEEGNLIRLPRTPCVREGLEDFISAKRRGEDIPGREFVKFIGTCFDGLVDTPILFPAEQAQLVQVLTDAENQLRVDKEREQKMREKEAGEADGEGHEGDFAPATLSGXXXXXXXXXXXXXXXXV-------KKGKAAKAG-GGDLFEEGDGISASEIYGLEHLVRMLAALPSMMGPAIDATVTSPRIVPGSRKYPAKCNKILAALVEFLEMQRQEGAFDREYISVKNNEST 5968
M +K +KEPGKSA+ APPKRL LSDKTAQAVFVDTEVLLEPE++GRSGSDAYGWA GKYYAVAPYA DGVVSRCGKDGKE+AVRFEIRDMTAGGEG+ LS TECKKVQKSQYYFFQAVEFLLPGKFLF+FSAKSTKYPDIEPVQ+S+TVKAPASLK SSSWTSG + GGS S GSS S XXXXXXXXXXXXXXXXXXXXXXXXXX ++KL+ GS V QG G RKR G GG GG+ SP S AQ K+KKK ++ A P S+A+ Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXX G G G G+A XXXXXXXX XXXXXX X XXXXXXXXXXXXXXX + + G +P G G +D + +R AP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P+AG G +G + A + XXXXXXXXXXXXXXXXX GG + + G V PW GL P E+ KG +H PG P ++Q G G A SK+ XXXXXXX P TGA A+ K S A A S + RA T SS P TT+ + A A XXXXX XXXXXXXXXXXXX L+ +++ S D +GP GLPKA K K+KS PGSPKAS A+P GGVAPG+V ELV AEA KTA AAGG AP LV+PK RGRPPTPGGKNA KRESLL+KL+E+++ K V KAG G A+ +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G K K KD K + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX G GG A+ TAG KK TG++ K LATP A + XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX + +W W+GGAWGKD++H++ELD ++M+EGTLPQTFSSYDGEFEVDIPAGLFG+ILDDTRAILEEGNLIRLPRTPCVREGLEDFISA R G+D+PGREF+KFIG CFDGL+DTP+LFPAEQ QLVQ LT AE+QLR+DKEREQ++R++EA + G+ TL G X XXXXXXX KK K ++A GDLF + DGISAS+IYGLEHLVRMLAALPSMMGPAIDA++TSPRI PGSRKYPAK NK+LAALVEFLE+QR+EGAFDREY+S +N ST
Sbjct: 1 MAGRKHDKEPGKSASIAPPKRLALSDKTAQAVFVDTEVLLEPEVIGRSGSDAYGWARGKYYAVAPYAEDGVVSRCGKDGKEVAVRFEIRDMTAGGEGVHLSATECKKVQKSQYYFFQAVEFLLPGKFLFIFSAKSTKYPDIEPVQFSVTVKAPASLKKSSSWTSGGAXXXXXXXXXXXXXXKVKGGS-RPSHGSSTSEDRNGAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXKLEQKLK-------------------------------------------GSTPV----QGTGDRKRGGPAGG------DGGIFSPRSGAQGKSKKKAKVGASEP-------------------------SSAVRVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRPGGXXXXXXX-----XGSDGTG---VGSAMNSGXXXXXXXXXXXXXXXXXXXXXXXGXAKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSK----GRQKSPVAVGAG--------QQRQDGGKEALSGGGVRRQDGASLAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGPIAG--GESGGAPKXXXXXXXXXXXXXXXXXXXXXXXXXXVGAASHAGAPLGXXXXXXXXXXXXXXXXXGGGVFQDLGGGRVPSPWASSGLVIGPPEQRKG-PNLHFGGPGSTSSPALSRSQAGAAXXXXXXXXXXXXXXXXXXXXXXXXKGTLGKTPASAVASKAXXXXXXXXXXXXXXXXXXXXXXXXXXX-XPHPKTGAESSAATGGKEVSAVA----AGSPLLPKVARAFKTSSS------------------------------------------------GPGTTDKTEVCKSSAAAXXXXXXXXXXXXXXXXXXXXXXASCHKSPKCVLKSPK-----------KVSSSSVSIDSSSSAAGPPGLPKAAAKSKSKSKATPGSPKASXXXXXXXXXX----XXXXXXXXXCAQPAAGGVAPGVVGELVLAAAEAVKTAAAAGGNAPA-LVVPKGRGRPPTPGGKNAKKRESLLQKLLEEEMAK---VNKAGTPGPAERSGPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSRDQEAPGSPAGKPKKKDKKXEGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-----------------------------------------------------------------------------------------------------------------------------------------------GAGGHADGTAGSDKKATGEE---------------KLLATPPAPKGXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEIDLRGDPMKVDXXXXXXXXXXXXXXXXVEDDRW-WVGGAWGKDENHVIELDENLMQEGTLPQTFSSYDGEFEVDIPAGLFGVILDDTRAILEEGNLIRLPRTPCVREGLEDFISASR-GDDVPGREFIKFIGNCFDGLLDTPLLFPAEQEQLVQALTHAESQLRLDKEREQELRDEEAIDVRGDXX---XXXQTLQGYAAAAGVXTXXXXXXXXXXXXXXXKKAKPSRADRAGDLFSDADGISASDIYGLEHLVRMLAALPSMMGPAIDASITSPRIAPGSRKYPAKYNKMLAALVEFLELQRREGAFDREYVSAENLAST 1497
BLAST of mRNA_P-littoralis_Contig156.12.8 vs. uniprot
Match: D7FZ16_ECTSI (MRG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ16_ECTSI) HSP 1 Score: 348 bits (893), Expect = 9.180e-94 Identity = 796/1819 (43.76%), Postives = 894/1819 (49.15%), Query Frame = 2
Query: 542 MPAKKLEKEPGKSATTAPPKRLGLSDKTAQAVFVDTEVLLEPEMVGRSGSDAYGWAAGKYYAVAPYAADGVVSRCGKDGKEMAVRFEIRDMTAGGEGMQLSVTECKKVQKSQYYFFQAVEFLLPGKFLFVFSAKSTKYPDIEPVQYSITVKAPASLKTSSSWTSGVMNGGSGTKSKGSSRS-----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQKKLEXXXXXXXXXXXXXXXXXXXXXXXXXMTKKSASMSGEASGASRAGSAGVGDTQ-QGIGIRKRVGGGGGARAEGMHGGLSSPLSSAQDKTKKKMRLPAPTPV-ATPKGRGPPTPALLPTGISADRGGSAAISGQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGDATEQGG---KGKGPRWKGAAA-----------------------------------KGRAPPAVPXXXXXXXXTKGXXXXXXXXXXXXXXXXXXXXXXXXXXQSGS---PAPFSGRAASSTTAQTKKRPRPDEGGESNAPAVTGVGGGVGGVGPSAGRDSSTNGVQKKRQKRTPTVKKAPPAKSKVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVAGAAGATGASNTPRACAVGANXXXXXXXXXXXXXXXXXXXXXGGAGRGVKSGVSYPWPPGLGTSPAEEEKGHAGVHPKLPGGRLFPVFYKAQTSGGAGSAEAGGATSKSIAKKTGKAXXXXXXXDKASPAKTAQATPRKTPATGAVGKGASNSKPASKAANRKAANSKVTLATKRAAATLSSIGGGKAXXXXXXXXXXXXXXXXXXXX------GRGXXXXXXXXXXXXXXXKAVSTPTTTEAGSAGGTHAIAATXXXXXVTXXXXXXXXXXXXXXXXXXPKXXNLQXXXXXXXXXXXXXLSIATGXXSGDGGGVDSGPLGLPKAG-KGKNKS-TVPGSPKASKSKIGSPSPRPGSGDISGGSESFSAKPGGGVAPGIVRELV-KVAEAAKTAVAAGGEAPTNLVIPKARGRPPTPGGKNALKRESLLKKLMEDQVGKLDQVEKAGGAADTAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GKAKNKIKDKDTKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDTNENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNEDGGGGRGGDAN-TAGPSKKTTGDDKPETPAPKGKGQGKPKNLATPAAGRHPTAPGSXXXXXXXXXXXXXVDGGTKTPASKLPSGASSSVKAKANKKGKKAAEIGTVGERKEEVRSDGVTEKLLEAKRREKLEKQEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKKWAWMGGAWGKDKDHLMELDGSVMEEGTLPQTFSSYDGEFEVDIPAGLFGIILDDTRAILEEGNLIRLPRTPCVREGLEDFISAKRRGEDIPGREFVKFIGTCFDGLVDTPILFPAEQAQLVQVLTDAENQLRVDKEREQKMREKEAGEADGEGHEG-----DFAPATLSGXXXXXXXXXXXXXXXXVKKGKAAKAGGGDLFEEGDGISASEIYGLEHLVRMLAALPSMMGP 5803
M +K +KEPGKSA+ APP+RL LSDKTAQAVFVDTEVLLEPE++GRSGSDAYGWA GKYYAVAPYA DGVVSRCGKDGKE+AVRFEIRDMTAGGEG+ LS TECKKVQKSQYYFFQAVEFLLPGKFLF+FSAKSTKYPDIEPVQ+S+TVKAPASLK SSSWTSG KG +RS + XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX K + S + ASR G+AG+G T QG G RKR G GG GG+ SP S AQ K+KKK ++ P A RGG A++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G K KG AAA KGR V G Q G+ PAP SG + S ++ + R GP AG +S G KK+QK+T +K P AKS+ A GA GA++ XXXXXXXXXXXX G GR V PW +G+ LP R P + GG S + XXXXXXX +KTA A KG KPAS A++ XXXXXXXX XXXXXXXXX G T T+ ++ AA+ XXXXXXXXXX PK S A G P G PKA K K+KS PGSPKASK VAPG+V ELV AEA KTA AAGG+AP LV+PK RGRPPTPGGKNA KRE LL+KL+E+++ K+++ + G A +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G K + KD K+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D E XXXXXXXXXXXXXXXXXXXXXX GG A+ TAG KK TG++KP P XXXXXXXXXXXXX K K + AAE+G G + ++R D +E E KXXXXXXXXXXXXX + +W W+GGAWGKD++HL+ELD ++M+EGTLPQTFSSYDGEFEVDIPAGLFG+ILDDTRAILEEGNLIRLPRTPCVREGLEDFISA R G+D+PGREF+KFIG CFDGL+DTP+LFPAEQ QLVQ LT AE+QLR+DKEREQ++R++EA + G+ +A A +G XXXXXXXXXXXXXXX GDLF + DGISAS+IYGLEHLVRMLAALPSMMGP
Sbjct: 1 MAGRKHDKEPGKSASIAPPQRLALSDKTAQAVFVDTEVLLEPEVIGRSGSDAYGWARGKYYAVAPYAEDGVVSRCGKDGKEVAVRFEIRDMTAGGEGVHLSATECKKVQKSQYYFFQAVEFLLPGKFLFIFSAKSTKYPDIEPVQFSVTVKAPASLKKSSSWTSGGAXXXXXXXXKGGNRSPHGSTTSEDRNGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDTNKSADGGAASRVGAAGLGSTPVQGTGDRKRGGPAGG------DGGVFSPRSGAQGKSKKKAKVGVSEPSSAVXXXXXXXXXXXXXXXXXXARGGVPAVTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGALKDKEKGGAKVKAAAVRKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGRQKSPVALGAGQQRQDGGKEALSGGGVRR---------------QDGASLVPAPVSGGSGYSGSSAATIKKRXXXXXXXXXXXXXXXXXXXXXXGPIAGGESG--GAPKKKQKKTLAPRKTP-AKSRATG-------------------------------------AKGGGAVGAASPASVRLXXXXXXXXXXXXXXXXGQGGGVFQDLGGGR-----VPSPW-------------ASSGLAIVLPEQREGPNLHF------------GGPGPTSSPAPSXXXXXXXXXXXXXXXSKTAXXXXXXXXXXXA--KGTPGKKPASAVASKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTGXXXXXXXXXXXXXAVAAGSPLPPKVVRAFKTSSSGPGTADKTKVCNSSAAAVGAASRPGAGENAXXXXXXXXXXASSCHKSPKCLLKSSKKVSPSPVSIGPSSSAAG------------PPGSPKAAAKSKSKSKATPGSPKASKXXXXXXXXXX---XXXXXXXXXXXXXXXXVAPGVVGELVLAAAEAVKTAAAAGGDAPA-LVVPKGRGRPPTPGGKNAKKREYLLQKLLEEEMAKVNK-DGTPGPAGCSGPFPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQEAPGSPAGKPRKKDNKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKVKDKDDGKEKGKGKAVXXXXXXXXXXXXXXXXXXXXXXKDCA------------------------------------------------------------------------------------------------------------------------------GGHADGTAGSDKKATGEEKP-LPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKVKKGKQAAAEVGDSGREEIDLRDDP-------------MEVDEDKXXXXXXXXXXXXXVE---------------------------------------------------------------------------DDRW-WVGGAWGKDENHLIELDENLMQEGTLPQTFSSYDGEFEVDIPAGLFGVILDDTRAILEEGNLIRLPRTPCVREGLEDFISASR-GDDVPGREFIKFIGNCFDGLLDTPLLFPAEQEQLVQALTHAESQLRLDKEREQELRDEEAIDVGGDXXXXGQTLQSYAAAADAGTXXXXXXXXXXXXXXXXXXXXXXXDRAGDLFSDADGISASDIYGLEHLVRMLAALPSMMGP 1492 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig156.12.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig156.12.8 >prot_P-littoralis_Contig156.12.8 ID=prot_P-littoralis_Contig156.12.8|Name=mRNA_P-littoralis_Contig156.12.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1814bp MPAKKLEKEPGKSATTAPPKRLGLSDKTAQAVFVDTEVLLEPEMVGRSGSback to top mRNA from alignment at P-littoralis_Contig156:48751..69982- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig156.12.8 ID=mRNA_P-littoralis_Contig156.12.8|Name=mRNA_P-littoralis_Contig156.12.8|organism=Pylaiella littoralis U1_48|type=mRNA|length=21232bp|location=Sequence derived from alignment at P-littoralis_Contig156:48751..69982- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig156:48751..69982- >mRNA_P-littoralis_Contig156.12.8 ID=mRNA_P-littoralis_Contig156.12.8|Name=mRNA_P-littoralis_Contig156.12.8|organism=Pylaiella littoralis U1_48|type=CDS|length=5442bp|location=Sequence derived from alignment at P-littoralis_Contig156:48751..69982- (Pylaiella littoralis U1_48)back to top |