prot_P-littoralis_Contig154.92.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig154.92.1
Unique Nameprot_P-littoralis_Contig154.92.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length576
Homology
BLAST of mRNA_P-littoralis_Contig154.92.1 vs. uniprot
Match: D8LPM1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM1_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 5.700e-104
Identity = 263/504 (52.18%), Postives = 313/504 (62.10%), Query Frame = 0
Query:    1 MPRVRVTTPRSWRRTGPRQIKHRNRRLCEKQRXXXXXXRG---TGGLRRRAPIRGGANLGEGQVYERPKRNKKPPRASDETEDMSAKTRYDDAWFNEK---WPLLDGSELTEQQKKEKEKVRLWKEEQKQREIDDARCRKCKKKTTQLGEPIVFCDDCGGKGARHFMCMNPQPDTIPDEEDEWFCGECTKKRGGAQPVQPVNVDGPTGSTQPQPXXXXXXXXXXXXXQQQTLPQPHQQPTEQAXXXXXXXXXXX--------NTSTATKRKGRTTSKPACKAGKAKAGSTPRGVTAPQVRTAGKREQTRTRLQKSVDMTEYARVLEQAWN-DIAAEFMENSREKADQKAEEFEGTCHRAKNEPPYSIASIPLIAKLLAEGLCDECSGSIEFLNGVFFKGSALAMLEPYYNWEYMFDPLSIGVDLGETVVEIKNKVHVLQSFDHGKYTLTDGTEISQWGLLKHRKDGGVTLEDDLRRFIIHLVTTDVNMMAHVVPLLKQKKRKSV 489
            +PRVRVT PRSWRRTG RQ+KH+NR       XXXXXX      GGLRRRAPIRGGA+ G+GQV     R+++ PR  DE ED+S+K RYDDAWF ++   W  L   E T Q    K +V  WK  ++++    A C +C K T     PI+ CD C  +GA H  C     + IP EEDEWFC  C +KRG   PVQP   DGP GSTQPQPXXXXXXXXXXXXX                XXXXXXXXX          N  TATKRK R  SK     GKAKA        A  VR      + R R    V   EYAR+LE   N D    F+E SR KA +KA+ FE TC R  NEPP SI SIPLIAKLL  GLCD+    IE L+GVFFK +AL  LE Y+NWEY+FDP SIGV LG T V I ++  V++SFD G+Y+L+DG+ + QWG+L++R DGGVTLED+ RRFIIHLVTT VNMMAHVVP++ ++   S+
Sbjct:  384 VPRVRVTKPRSWRRTGRRQLKHQNRXXXXXXXXXXXXXXXXXXAGGLRRRAPIRGGADPGDGQVRRTSARDRRAPRKPDEPEDLSSKARYDDAWFEKREKEWLDLPEPERTTQLDWGKGQVEAWKAGKEKK----AACMECSKGTWYSDNPILLCDGCV-RGALHLRCTKFPLEAIPGEEDEWFCDACREKRGETPPVQPTVADGP-GSTQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMERAPVSTVANPITATKRKPRAASK-----GKAKAXXXXXXXXAGNVR------KRRVRKPARVVAKEYARILEDVLNSDEMGTFVEASRAKAAEKAKHFENTCPRTPNEPPSSITSIPLIAKLLTRGLCDDPLDGIEILDGVFFKRAALDALERYFNWEYVFDPESIGVFLGTTKVGIDDEEFVVESFDCGEYSLSDGSVMQQWGVLENRTDGGVTLEDEQRRFIIHLVTTYVNMMAHVVPVVIEESTPSM 870          
BLAST of mRNA_P-littoralis_Contig154.92.1 vs. uniprot
Match: D8LJ27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ27_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.580e-23
Identity = 73/171 (42.69%), Postives = 101/171 (59.06%), Query Frame = 0
Query:  315 WNDIAA--EFMENSREKADQKAEEFEGTCHRAKNEPPYSIASIPLIAKLLAEGLCDECSGSIEFLNGVFFKGSALAMLEPYYNWEYMFDPLSIGVDLGETVVEIKNKVHVLQSFDHGKYTLTDGTE--ISQWGLLKHRKDGGVTLEDDLRRFIIHLVTTDVNMMAHVVPLL 481
            W D  A  + M  ++EK D   E  E    + + E   + +S P + +   EG      G IE  +GV++K + L  L+ YY+  Y FDP +IGV L ET V+I +++H ++S DHGKYTL +G E  I+QW LL++R D  VTL+ DLRRFI+HLVT    MM  VVP L
Sbjct:   46 WGDQEAYDKKMAETKEKRDAAREVHEANQKKRQAELE-AASSTPHVTERQEEGSDGNGEGDIEISDGVYYKRAELRTLQYYYDKSYAFDPKNIGVVLSETGVKIDSRIHAVKSVDHGKYTL-EGRESRITQWELLENRCDERVTLDTDLRRFILHLVTKYTVMMGSVVPAL 214          
BLAST of mRNA_P-littoralis_Contig154.92.1 vs. uniprot
Match: UPI0000161E59 (hypothetical protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E59)

HSP 1 Score: 109 bits (273), Expect = 1.780e-22
Identity = 71/182 (39.01%), Postives = 104/182 (57.14%), Query Frame = 0
Query:  299 QKSVDMTEYARVLEQAWNDIAAEFMENSREKADQKAEEFEGTCHRAKNEPPYSIASIPLIAKLLAEGLCDECSGSIEFLNGVFFKGSALAMLEPYYNWEYMFDPLSIGVDLGETVVEIKNKVHVLQSFDHGKYTLTDG-TEISQWGLLKHRKDGGVTLEDDLRRFIIHLVTTDVNMMAHVVP 479
            Q+ +  T  A+ LE+        F+EN+R  +D+  EE   T  RA N+P     +I   A+ LA  L  +   SIE   GV+F  S+ + ++  Y  +Y FDP  IGV++G T V   NKV  +++FD+G YTL D  ++++QW +L++R   GVTLE DLRR+I  LV T V M +  VP
Sbjct:   94 QRGLRSTTLAQELEEPILACMEPFLENNRRASDELVEERRDTAPRAPNKPA-GTGTIADAARFLAM-LSHDKKDSIEIKEGVYFPRSSKSEIKSQYELDYAFDPSDIGVEVGRTTVTWGNKVQTVEAFDYGIYTLGDKKSKLTQWDVLENRHGRGVTLEQDLRRYIGQLVLTYVVMQSTGVP 273          
BLAST of mRNA_P-littoralis_Contig154.92.1 vs. uniprot
Match: A0A6H5L073_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L073_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 8.590e-21
Identity = 70/182 (38.46%), Postives = 105/182 (57.69%), Query Frame = 0
Query:  299 QKSVDMTEYARVLEQAWNDIAAEFMENSREKADQKAEEFEGTCHRAKNEPPYSIASIPLIAKLLAEGLCDECSGSIEFLNGVFFKGSALAMLEPYYNWEYMFDPLSIGVDLGETVVEIKNKVHVLQSFDHGKYTLTDGT-EISQWGLLKHRKDGGVTLEDDLRRFIIHLVTTDVNMMAHVVP 479
            Q+ +  T  A+ LE+        F+EN+R  +D+  EE   T  R K++P     +I   A+ LA    D+  G IE   GV+F  S+L  ++  Y  +Y F+P  IGV++G+T V  K KV  +++FD+G YTL D   +++QW +L++R+  GVTLE DLRR+I  LV T V M +  VP
Sbjct:  644 QRGLRSTTLAQELEEPILPCMEPFLENNRRASDELVEERRDTAPRTKSKPA-GAGTIADAARFLAMLSHDKKDG-IEIKEGVYFPRSSLGAIKSQYELDYAFNPSHIGVEVGKTTVMWKGKVQKVEAFDYGFYTLGDKEFKLTQWDVLENRRGSGVTLEQDLRRYIGQLVLTYVVMQSTGVP 823          
BLAST of mRNA_P-littoralis_Contig154.92.1 vs. uniprot
Match: D7FZ65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ65_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 4.010e-19
Identity = 59/136 (43.38%), Postives = 81/136 (59.56%), Query Frame = 0
Query:  350 YSIASIPLIAKLLAEGLCDECSGSIEFLNGVFFKGSALAMLEPYYNWEYMFDPLSIGVDLG------ETVVEIKNKVHVLQSFDHGKYTLTDGTEISQWGLLKHRKDGGVTLEDDLRRFIIHLVTTDVNMMAHVVP 479
            Y + ++P +AK+L     D  + ++   +GV+ +   L  LE  ++  YMF+P  IGV L       ET VEI  +  V++SF+ GKYTL DGTEI QW LL+ R  GGVTL+D+ RRF+  LV T   MMA  VP
Sbjct:  258 YGVETVPGLAKMLTGLTEDPNNDNLLVEDGVYCRRDKLDELESAFSAAYMFNPSHIGVSLNPLDPLNETKVEIGGRELVVKSFNTGKYTLEDGTEIGQWELLETRCGGGVTLDDECRRFVRFLVATYTAMMARGVP 393          
BLAST of mRNA_P-littoralis_Contig154.92.1 vs. uniprot
Match: A0A6H5J7T3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7T3_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 5.190e-19
Identity = 71/175 (40.57%), Postives = 84/175 (48.00%), Query Frame = 0
Query:  306 EYARVLEQAW-NDIAAEFMENSREKADQKAEEFEGTCHRAKNEPPYSIASIPLIAKLLAEGLCDECSGSIEFLNGVFFKGSALAMLEPYYNWEYMFDPLSIGVDLGETVVEIKNKVHVLQSFDHGKYTLTDGTEISQWGLLKHRKDGGVTLEDDLRRFIIHLVTTDVNMMAHVVP 479
            E AR+LE    +D   +FME S+ KAD+KAEE EGTC RA  EPP++I SIPLIAKLL  GLCD                                DP   G+                               + QWGLL+ R DG VTLE + RRF+IHLVTT VNM+ HVVP
Sbjct:  129 ENARILEACLGDDELTDFMERSKAKADEKAEEIEGTCSRAGKEPPHAITSIPLIAKLLTPGLCD--------------------------------DP---GI-------------------------------MHQWGLLEKRTDGVVTLEAEQRRFVIHLVTTYVNMITHVVP 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig154.92.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LPM1_ECTSI5.700e-10452.18PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
D8LJ27_ECTSI1.580e-2342.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0000161E591.780e-2239.01hypothetical protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L073_9PHAE8.590e-2138.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ65_ECTSI4.010e-1943.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7T3_9PHAE5.190e-1940.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 320..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..530
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..278
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 131..183
e-value: 2.7E-5
score: 33.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 116..198
e-value: 4.8E-11
score: 44.1
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 131..184
e-value: 8.9E-8
score: 31.9
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 129..185
score: 9.0005
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 122..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig154contigP-littoralis_Contig154:335657..337726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig154.92.1mRNA_P-littoralis_Contig154.92.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig154 333056..339211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig154.92.1 ID=prot_P-littoralis_Contig154.92.1|Name=mRNA_P-littoralis_Contig154.92.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=576bp
MPRVRVTTPRSWRRTGPRQIKHRNRRLCEKQRRRRRQRRGTGGLRRRAPI
RGGANLGEGQVYERPKRNKKPPRASDETEDMSAKTRYDDAWFNEKWPLLD
GSELTEQQKKEKEKVRLWKEEQKQREIDDARCRKCKKKTTQLGEPIVFCD
DCGGKGARHFMCMNPQPDTIPDEEDEWFCGECTKKRGGAQPVQPVNVDGP
TGSTQPQPQPMNVDGPTESTQQQQTLPQPHQQPTEQAPVSTVPVSTVANT
STATKRKGRTTSKPACKAGKAKAGSTPRGVTAPQVRTAGKREQTRTRLQK
SVDMTEYARVLEQAWNDIAAEFMENSREKADQKAEEFEGTCHRAKNEPPY
SIASIPLIAKLLAEGLCDECSGSIEFLNGVFFKGSALAMLEPYYNWEYMF
DPLSIGVDLGETVVEIKNKVHVLQSFDHGKYTLTDGTEISQWGLLKHRKD
GGVTLEDDLRRFIIHLVTTDVNMMAHVVPLLKQKKRKSVTTYEVYALEPN
RSSQGRDKQRTEGGAGGNNQAGGHSAGPDTENLHQSRREGHSACEFLGHR
KEQGRLARVRGKGWIAATDKFSGWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD