mRNA_P-littoralis_Contig1.78.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1.78.1
Unique NamemRNA_P-littoralis_Contig1.78.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: D7G2E5_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E5_ECTSI)

HSP 1 Score: 509 bits (1311), Expect = 1.660e-177
Identity = 226/291 (77.66%), Postives = 263/291 (90.38%), Query Frame = 3
Query:    3 LALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQ 875
            L +DDT T LP RDIF FLSAQDC+NFLRF+R QII+ ++ LCVPD IRT+CGYV++GRTALC+LLYR+AFPCRYKDMR+IFH  DS LCE FNYMLHFM+ETWG +LTLD+GRLVP+L+ F E LQ WGCPLPNCWAFIDGTVRAICR  R QRA+FNGHKR+HAIK Q++VTPDG++VDLFGPELGTRHDVHLL++SGVL+   EH+NS+SGDPY++YGDPAYGMSTHLNCPYSAE YGPL+AGM+EFNK MSACRV VEWVFKEMTSKWAFV++KNQQK+LLSP+GV+
Sbjct:   16 LPIDDTATPLPARDIFTFLSAQDCINFLRFSREQIIITVQHLCVPDMIRTDCGYVIAGRTALCVLLYRLAFPCRYKDMRLIFHRSDSCLCETFNYMLHFMNETWGSMLTLDLGRLVPRLDFFAERLQTWGCPLPNCWAFIDGTVRAICRTIREQRAFFNGHKRYHAIKLQSVVTPDGIMVDLFGPELGTRHDVHLLHESGVLVMCQEHMNSASGDPYVVYGDPAYGMSTHLNCPYSAEAYGPLSAGMIEFNKQMSACRVAVEWVFKEMTSKWAFVALKNQQKHLLSPIGVR 306          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 1.540e-156
Identity = 215/328 (65.55%), Postives = 254/328 (77.44%), Query Frame = 3
Query:    3 LALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 986
            LA+DD PT    R +  F S QDCV F+RFTR QI+LM+ELL VP  IRTECG+V+ GR ALC+LLYR+AFPC  KDMR+ F L +S +CE FN+MLHFMD  WG LL+LD+ RLVP+L  F EA+   GCPL +CWAFIDGTVR I RP RN+R ++NG+KR HAIKFQ +VTPDG+ VDL+  E+GT HD +LL +S +L  L  H+NS SG PY +YGDPAYG + H+ CP+SA   GPLT  M +FNK+MS CRVTVEW FKEMTSKWAFV MK QQK+LLSPV  QYKVATLLSN HSCLNGGN+ISQYFG  PP+LEEYL V
Sbjct:   93 LAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVEWGFKEMTSKWAFVDMKCQQKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 420          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE)

HSP 1 Score: 452 bits (1162), Expect = 1.760e-155
Identity = 211/328 (64.33%), Postives = 256/328 (78.05%), Query Frame = 3
Query:    3 LALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 986
            L LDDTPT +   D   F S QDCVNFLRFT+SQ++LM++LL +P  IRT+C +V+SGR ALC+LLYR+AFPCR KDMR++F L +S +CEAFN+MLHF+D  WG LL+LD+ RL P L  F EA+   GCPL +CW FIDGTVR I RPK  QR ++NGHKR HA+KFQ ++TPDG+ VDL+GP  GTRHD  +L QSG++  L+  +NS +G PY +YGDPAYG+S HL CP+SA + GPLT  M +FNK MS CRVTVEW FKEMT KWAFVSMK QQK+LLSPV  QY+VATLLSN HSC+NGGNEISQYFG  PP+ EEY+ V
Sbjct:    4 LELDDTPTSIARSDATAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 330          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI)

HSP 1 Score: 452 bits (1164), Expect = 1.780e-155
Identity = 209/328 (63.72%), Postives = 254/328 (77.44%), Query Frame = 3
Query:    3 LALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 986
            L  DD  T +  RD+  F S QDC+NFLRFT+ QI+LM++LL +P  IRT+CG+ +SGR ALC+LLYR+AFPCR KDMR++F L +S + E FN+MLHF++  WG LL+LD+ RL P+L  F EA+    CPL +CW FIDGTVR I RP R QR Y+NGHKR HAIKFQ ++TPDG+ VD++GP LGTRHD +LL QSG++  LA H NS SG PY +YGDPAYG+S HL CP+SA ++GPLT  M +FN+ MS CRV VEW FKEMTSKW FV MK QQKYLLSPVG QY VATLLSNIHSCLNGGN+ISQ+F   PP+L+EYL V
Sbjct:   23 LVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVEWGFKEMTSKWTFVDMKPQQKYLLSPVGKQYLVATLLSNIHSCLNGGNQISQFFDVQPPTLQEYLKV 350          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: A0A6H5L370_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L370_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 8.970e-147
Identity = 202/311 (64.95%), Postives = 241/311 (77.49%), Query Frame = 3
Query:   54 FLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 986
            F S QDCV F+RFTR QI+LM+ELL VP  IRTECG V+ GR ALC+LLYR+AFPCR KDMR++F L +S +CE FN+MLH MD     LL+LD+ RLVP+L  F EA+   GCPL +CWAFIDGTVR I RP RNQR +++G+KR HAIKFQ +VTPDG++ DL+  E+GTRHD +LL QS +L  L  H+NS SG PY ++GDPAYG + H+ CP+SA   G L++ M  FNK+MS  RVTVEW FKEMTSKWAFV MK QQK+LLSPV  QY VATLLSN HSCLNGGN+ISQYFG  PP+LEEYL V
Sbjct:    4 FFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGVVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHIMDVKLRFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYSGYKRKHAIKFQGVVTPDGLIDDLYAAEVGTRHDGYLLAQSALLEKLQTHMNSPSGHPYCLHGDPAYGQTDHVQCPFSASVNGLLSSAMRNFNKSMSQRRVTVEWGFKEMTSKWAFVGMKCQQKFLLSPVATQYNVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 314          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE)

HSP 1 Score: 422 bits (1085), Expect = 1.140e-138
Identity = 200/311 (64.31%), Postives = 240/311 (77.17%), Query Frame = 3
Query:   54 FLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 986
            F S QDCVNFLRFT  QI +M+ELL +P  IRT CG+V+SGR ALC+LLYRMAFPCR KDM ++F + +S +CEAF +MLHF+D  WG LL+L +  +  +L  F EA+   GCPLP CW FIDGTVR I RPKR QR ++N HK  HA KFQ +VTPDG+  DL+GP +GTRHD ++L QSG++  LA  +NS SG PY +YGDPAYG+S HL CP+SA + GPLT  + +FNK +SACRVTVEW FKE+ + WAFV+MK QQK LLSPV VQY+VATLLSN HSCLNGGNEISQYFG  PPS EEYLGV
Sbjct:  388 FFSPQDCVNFLRFTILQITVMLELLLIPAFIRTTCGFVVSGREALCVLLYRMAFPCRLKDMPLVFGMSESRICEAFKWMLHFLDFKWGFLLSLSVESVQLRLLEFAEAVYNAGCPLPRCWGFIDGTVRGIARPKRWQRLFYNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAM-LNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVEWGFKEICNYWAFVNMKQQQKSLLSPVAVQYRVATLLSNWHSCLNGGNEISQYFGVGPPSFEEYLGV 697          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: A0A6H5KH29_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH29_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 2.890e-136
Identity = 204/371 (54.99%), Postives = 247/371 (66.58%), Query Frame = 3
Query:    3 LALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILM------------------------------------------MELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEV-FVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 986
            L  DD  T L  RD   F S QDC+NFLRFT+ Q  L+                                          ++LL +P  IRT+CG+++SGR ALC+LLYR+AFPCR KDMR++F L +S +CE FN MLHF+D  WG LL++D+ RL P+L V F EA+   GCPL +CW FID T+R I R +       +     HAIKFQ +VTPDG+ VDL+G  LGTRHD +LL QSG++  LA H NS SG PY +YGDPAYG+S HL CP+SA +YGPLT  M +FN+ MS CRVTVEW FKEMTSKWAFV MK+QQKYLLSPVG QY+VATLLSN+HSCLNGGN+ISQYF   PP+LEEYL V
Sbjct:   42 LITDDVATSLARRDAANFFSPQDCINFLRFTQPQTTLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNRMLHFLDFKWGWLLSVDVERLKPRLLVEFAEAIYNAGCPLTHCWGFIDETIRGIARVRLADTHQLS----IHAIKFQGVVTPDGLFVDLWGLVLGTRHDSYLLAQSGLMQKLAAHFNSPSGRPYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMADFNQRMSHCRVTVEWGFKEMTSKWAFVDMKSQQKYLLSPVGKQYRVATLLSNMHSCLNGGNQISQYFNLQPPTLEEYLKV 408          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: A0A6H5JM46_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM46_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 6.920e-118
Identity = 183/329 (55.62%), Postives = 224/329 (68.09%), Query Frame = 3
Query:    3 LALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWA--FIDGTVRAIC-RPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYL 980
            LA+DD PT    RD+  F S QDCV F+RFTR QI+LM+ELL VP  IRTECG+V+ GR ALC+LLYR+AFP R KDMR++F  P+ +L     Y+  F  +       + +  L  +     +A    G  L    +   + G  R  C RP RNQR ++NG+KR HAIKFQ +VTPDG+ V+L+G  +GTRHD HLL QS +L  L  H+NS SG  Y +YG+PAYG + H+ CP+S    GPLT  M  FNK+MS CRVTVEW FKEMTSKWAF+ MK Q K+LLSPV  QYKVATLLSN HSCLNGGN+ISQYFG  PP+LEEYL
Sbjct:   17 LAIDDIPTGAARRDVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPYRLKDMRLVFR-PERIL-----YLRDFQLDATLHGFQVGVPPLAGRSTAGTKASYFCGGSLQQRLSPDTLLGLHRRNCARPIRNQRFFYNGYKRKHAIKFQGVVTPDGLFVELYGAVVGTRHDGHLLAQSALLEKLQTHMNSPSGHRYCLYGNPAYGQTDHIQCPFSVSVNGPLTPAMRNFNKSMSRCRVTVEWGFKEMTSKWAFIDMKCQHKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYL 339          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 1.450e-113
Identity = 179/346 (51.73%), Postives = 224/346 (64.74%), Query Frame = 3
Query:    3 LALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILM-----------------MELLCVPDRI-RTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSPVGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGV 986
            L LDDTPT +  RD+  F S QDCV+FLRF +SQ+I                   +EL   P  I R +     S +  +  L +  +          +F L +S +CEAFN+MLHF+D  WG LL+LD+ RL   L  F EA+    C L +CW FIDGTVR I RPK  QR ++NGHKR HA+KFQ ++TPDG+ VDL+GP  GTRHD  +L QSG++  L+  +NS +G PY +YGDPAYG+S +L CP+SA + GP T  M +FNK MS CRVTVEW FKEMT KW  V+MK QQK+ LSP+  QY+VATLLSN HSC+NGGNEISQYFG  P + EEYL V
Sbjct:   30 LELDDTPTSIARRDVTAFFSPQDCVSFLRFKQSQVIYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFTQS------QHPXVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQLHLIEFAEAIFNSCCRLTHCWGFIDGTVRGIARPKYWQRMFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNYLVCPFSASSVGPRTPEMADFNKRMSHCRVTVEWGFKEMTGKWVLVNMKPQQKFSLSPIAKQYRVATLLSNWHSCMNGGNEISQYFGVVPLTFEEYLAV 368          
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 3.380e-113
Identity = 157/263 (59.70%), Postives = 199/263 (75.67%), Query Frame = 3
Query:    3 LALDDTPTHLPTRDIFEFLSAQDCVNFLRFTRSQIILMMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDSLLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCWAFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPELGTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSAETYGPLTAGMMEFNKNMSACRVTVEW 791
            L LDDTPT +  RD+  F S QDCVNFLRFT+SQ++LM++LL +P  IRT+CG+V+SGR ALC+LLYR+AFPCR KDMR++F + +S +CE FN+MLHF+D  WG LL+LD+ RL P L  F EA+   GCPL +CW FIDGTVR I RPK  QR  +NGHKR HA+KFQ ++TPDG+ VDL+GP  GTRH   +L QSG++  ++  +NS +  PY + GDPAYG+S HL CP+SA + GPLT  M +FNK MS CRVTVEW
Sbjct:   29 LELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRLLYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFILAQSGLMEKMSV-LNSPTSHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEW 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2E5_ECTSI1.660e-17777.66DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JS57_9PHAE1.540e-15665.55DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KB08_9PHAE1.760e-15564.33DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D8LL85_ECTSI1.780e-15563.72DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5L370_9PHAE8.970e-14764.95DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KLS3_9PHAE1.140e-13864.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH29_9PHAE2.890e-13654.99DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JM46_9PHAE6.920e-11855.62DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJ08_9PHAE1.450e-11351.73DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KRJ1_9PHAE3.380e-11359.70DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:493943..495777 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2E5
PFAMsDDE_Tnp_4
Model size1318
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.21e-159
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota
DescriptionDDE superfamily endonuclease
Cds size882
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789312.3057504-UTR-P-littoralis_Contig1:493942..4940461680789312.3057504-UTR-P-littoralis_Contig1:493942..494046Pylaiella littoralis U1_48UTRP-littoralis_Contig1 493943..494046 +
1680789312.3153334-UTR-P-littoralis_Contig1:494291..4943001680789312.3153334-UTR-P-littoralis_Contig1:494291..494300Pylaiella littoralis U1_48UTRP-littoralis_Contig1 494292..494300 +
1680789312.3440878-UTR-P-littoralis_Contig1:495454..4957771680789312.3440878-UTR-P-littoralis_Contig1:495454..495777Pylaiella littoralis U1_48UTRP-littoralis_Contig1 495455..495777 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789312.3268983-CDS-P-littoralis_Contig1:494300..4946351680789312.3268983-CDS-P-littoralis_Contig1:494300..494635Pylaiella littoralis U1_48CDSP-littoralis_Contig1 494301..494635 +
1680789312.3356392-CDS-P-littoralis_Contig1:494907..4954541680789312.3356392-CDS-P-littoralis_Contig1:494907..495454Pylaiella littoralis U1_48CDSP-littoralis_Contig1 494908..495454 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.78.1prot_P-littoralis_Contig1.78.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1 494301..495454 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1.78.1

>prot_P-littoralis_Contig1.78.1 ID=prot_P-littoralis_Contig1.78.1|Name=mRNA_P-littoralis_Contig1.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=294bp
MMELLCVPDRIRTECGYVLSGRTALCILLYRMAFPCRYKDMRVIFHLPDS
LLCEAFNYMLHFMDETWGPLLTLDIGRLVPQLEVFVEALQAWGCPLPNCW
AFIDGTVRAICRPKRNQRAYFNGHKRFHAIKFQAIVTPDGMVVDLFGPEL
GTRHDVHLLNQSGVLLTLAEHINSSSGDPYIMYGDPAYGMSTHLNCPYSA
ETYGPLTAGMMEFNKNMSACRVTVEWVFKEMTSKWAFVSMKNQQKYLLSP
VGVQYKVATLLSNIHSCLNGGNEISQYFGCPPPSLEEYLGVAV*
back to top

mRNA from alignment at P-littoralis_Contig1:493943..495777+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1.78.1 ID=mRNA_P-littoralis_Contig1.78.1|Name=mRNA_P-littoralis_Contig1.78.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1835bp|location=Sequence derived from alignment at P-littoralis_Contig1:493943..495777+ (Pylaiella littoralis U1_48)
GGCTCGCGCTTGACGACACCCCGACCCATTTGCCAACGAGAGACATCTTC GAGTTCTTGAGCGCCCAGGACTGCGTCAACTTCCTGCGCTTCACCCGATC CCAGGTAGGTGCGCTGCCGAGATATGTGTGGTCTAGGTGAAGGTTGCACC ACAGCAGCAGCAAAACGTGTGCTCTCCCGCCGGGGCCATATGTACATACA ATACATTCAGCAGACACACACACTACCCTGTGGGGCCGCCGACGTTGTGC GGATGCAAGTCATCCATGTTGGGAACGCGCAGAATAGGCGCTGCCGGGTT GCTGAACTTATCCCGTGTGGCTGCGTTGTTCGCTGTGTTGTTTTCGCAGA TCATCCTCATGATGGAGCTGCTGTGCGTGCCGGACAGGATTCGAACGGAG TGTGGCTACGTTTTGTCGGGGCGTACCGCACTCTGTATCCTCCTGTATCG GATGGCGTTCCCGTGTCGATACAAGGACATGCGGGTGATATTTCATCTTC CGGATTCATTGCTATGCGAAGCCTTTAACTACATGTTGCATTTCATGGAC GAGACGTGGGGCCCGCTGCTTACACTCGATATCGGGAGGTTGGTGCCCCA GCTGGAGGTGTTCGTGGAAGCTCTCCAAGCCTGGGGTTGTCCCCTGCCCA ACTGCTGGGCTTTCATCGACGGCACCGTTCGCGCTATTTGTAGGTACGTT TTTAGGCATCTACTGGTGTCCACCGAGGGTCGGAGGTTTATTAGGAGAGT CTGCCGCTGTTCCTATGGCCTCATGTTACTCCTCGCGGTGCAAGTACACG GGGCCTCAGGGCTGTTCCTATGCCGGACGCGAGCTTCTCGTGTCGGTTTA GCTACGGGTGAAAGTAGCAGAGTGTACGCCAGAACTCTGTAAGACAGCTA AAGACAGAGTCGTGTTCACAGCACCGCTCCCTTTCCGTCCGTGTGCTGTT TTCGGTGCACGACAGGCCAAAACGCAACCAGCGAGCCTATTTCAACGGCC ACAAGCGTTTTCACGCCATCAAGTTCCAAGCCATCGTCACTCCAGACGGT ATGGTGGTGGATCTCTTTGGGCCAGAACTAGGGACGAGGCATGATGTTCA CTTGCTGAACCAGTCCGGTGTGCTGTTGACGTTGGCGGAGCATATCAACA GCTCGTCGGGCGATCCGTATATCATGTACGGGGATCCGGCGTACGGGATG AGTACACACCTGAACTGCCCGTATTCCGCGGAAACGTACGGGCCGCTTAC TGCAGGAATGATGGAATTTAACAAGAACATGAGTGCTTGTCGAGTAACGG TCGAGTGGGTGTTCAAGGAAATGACTTCCAAGTGGGCTTTTGTAAGCATG AAGAACCAGCAGAAGTACCTCCTCAGCCCGGTTGGTGTGCAGTACAAGGT GGCCACACTGTTGTCCAACATCCACTCGTGTTTGAACGGGGGCAACGAGA TCTCCCAGTACTTCGGATGCCCTCCTCCCTCGTTGGAGGAGTACCTAGGT GTGGCCGTGTGAGGCAACGCGATCCGCACTCTTTACGTACTCTTGTGGGT TGTGATAGGGTGTTGGACCAAGTTGGACGCAATGGTGTTCGTGTCGGCTT TGAGTAATTTCCCCATTTGCGTGCTGGCTAGGTTTTTGCCCGGTGAAGGC CGAAACGTTTTGCAGGTGGGGCATGCACCCACTTGCGCGGTTGTAAGGTT AGCGATCTTTTTGGACCTTTAGAGTTGATGCCGCGTGCGCACGGACGCGA GGGGTAGGTTCTTGCTTGGGTGGAGTGCCAGAGGTGTTGTAGTGCCGACG TCGGTCGTTCGGGTTTAAAACTACGAGAAGCGTTG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1:493943..495777+

>mRNA_P-littoralis_Contig1.78.1 ID=mRNA_P-littoralis_Contig1.78.1|Name=mRNA_P-littoralis_Contig1.78.1|organism=Pylaiella littoralis U1_48|type=CDS|length=882bp|location=Sequence derived from alignment at P-littoralis_Contig1:493943..495777+ (Pylaiella littoralis U1_48)
ATGATGGAGCTGCTGTGCGTGCCGGACAGGATTCGAACGGAGTGTGGCTA
CGTTTTGTCGGGGCGTACCGCACTCTGTATCCTCCTGTATCGGATGGCGT
TCCCGTGTCGATACAAGGACATGCGGGTGATATTTCATCTTCCGGATTCA
TTGCTATGCGAAGCCTTTAACTACATGTTGCATTTCATGGACGAGACGTG
GGGCCCGCTGCTTACACTCGATATCGGGAGGTTGGTGCCCCAGCTGGAGG
TGTTCGTGGAAGCTCTCCAAGCCTGGGGTTGTCCCCTGCCCAACTGCTGG
GCTTTCATCGACGGCACCGTTCGCGCTATTTGTAGGCCAAAACGCAACCA
GCGAGCCTATTTCAACGGCCACAAGCGTTTTCACGCCATCAAGTTCCAAG
CCATCGTCACTCCAGACGGTATGGTGGTGGATCTCTTTGGGCCAGAACTA
GGGACGAGGCATGATGTTCACTTGCTGAACCAGTCCGGTGTGCTGTTGAC
GTTGGCGGAGCATATCAACAGCTCGTCGGGCGATCCGTATATCATGTACG
GGGATCCGGCGTACGGGATGAGTACACACCTGAACTGCCCGTATTCCGCG
GAAACGTACGGGCCGCTTACTGCAGGAATGATGGAATTTAACAAGAACAT
GAGTGCTTGTCGAGTAACGGTCGAGTGGGTGTTCAAGGAAATGACTTCCA
AGTGGGCTTTTGTAAGCATGAAGAACCAGCAGAAGTACCTCCTCAGCCCG
GTTGGTGTGCAGTACAAGGTGGCCACACTGTTGTCCAACATCCACTCGTG
TTTGAACGGGGGCAACGAGATCTCCCAGTACTTCGGATGCCCTCCTCCCT
CGTTGGAGGAGTACCTAGGTGTGGCCGTGTGA
back to top