prot_P-littoralis_Contig1537.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1537.6.1
Unique Nameprot_P-littoralis_Contig1537.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length53
Homology
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BLAST of mRNA_P-littoralis_Contig1537.6.1 vs. uniprot
Match: D7FR12_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR12_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 5.020e-10
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0 
Query:    1 TERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCR 46
            TE  HF + D+R RT+E D+ CVK D V PG + RRLTP ++ MCR
Sbjct:  204 TEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 249
[Close]
BLAST of mRNA_P-littoralis_Contig1537.6.1 vs. uniprot
Match: D8LSV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV9_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 5.260e-10
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0 
Query:    1 TERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCR 46
            TE  HF + D+R RT+E D+ CVK D V PG + RRLTP ++ MCR
Sbjct:  240 TEPNHFVVRDDRTRTSEHDYACVKYDTVEPGKSSRRLTPPKNFMCR 285
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1537.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR12_ECTSI5.020e-1054.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSV9_ECTSI5.260e-1054.35Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1537contigP-littoralis_Contig1537:8790..9367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1537.6.1mRNA_P-littoralis_Contig1537.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1537 8788..9367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1537.6.1 ID=prot_P-littoralis_Contig1537.6.1|Name=mRNA_P-littoralis_Contig1537.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=53bp
TERRHFAIYDNRKRTTEQDWGCVKNDEVSPGSAPRRLTPERHLMCRSAKG
EGC
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