prot_P-littoralis_Contig153.103.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig153.103.5
Unique Nameprot_P-littoralis_Contig153.103.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length344
Homology
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: D7G8Q3_ECTSI (Mitochondrial ribosomal protein L46 isoform 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q3_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 6.880e-138
Identity = 203/263 (77.19%), Postives = 226/263 (85.93%), Query Frame = 0
Query:    1 MMLGRCSMLASSAARRARLYPTTMFGGLCYREMSAPSNLSTKQQMKGFTIKDHRPPRPRVAKEKRKQYLEQRKASFEVEQEKATRLGLDWDIKSALILERLPVIVEEYPDWQRDFWNLQAQQAHYGPKFPAEMGFKYDDEKPLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAGWRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAGWFWRTAKEEER-PNSTYGDKV 262
            M   RC+ML+SSA RR +L P  +      RE+S+ SNL+ KQQ++GFTIKD RPPRPRVAK+KRKQYL +RK +FE EQEKAT LGLDW I+SALILERLPVIVEEY DWQRDFW+LQ +QAHYG KFPAEMGFKYDDEK LTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERL+LI+KP+ G  WRLPESAWE GETIRQTAERTAQQ+LLK+AT KGQRDDVAQLHFVGNCPAGWFWRTA EE+   +  +GDKV
Sbjct:    1 MFARRCTMLSSSAVRRVKLRPLAVLLAPNCRELSS-SNLTKKQQIEGFTIKDRRPPRPRVAKQKRKQYLAERKDAFEAEQEKATSLGLDWGIRSALILERLPVIVEEYTDWQRDFWDLQTKQAHYGAKFPAEMGFKYDDEKSLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLVLIVKPRSGDEWRLPESAWEPGETIRQTAERTAQQLLLKSATRKGQRDDVAQLHFVGNCPAGWFWRTADEEQGGQHEKFGDKV 262          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: W7TRZ1_9STRA (Mitochondrial ribosomal protein l46 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRZ1_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.050e-21
Identity = 72/209 (34.45%), Postives = 102/209 (48.80%), Query Frame = 0
Query:   68 YLEQRKASFEVEQEKATRLGLDWDIKSALILERLPVIVEEYPDWQRDFWNLQAQQAHYGPKFPAEMGFKYDD-EKPLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAG-WRLPESAWEAGE--------TIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAGWFWRTAKEEERPNS----TYGDKV 262
            YL+ R A     +  A    L W I +A I+ER P+I++E  DW+  +  +Q + A +G  FP E+       E   + ++VL + P  LAPR T AD  NDRTTL+RAL ERL L+I+  +  G W LP +  E G         ++R+T E T ++ L           D  + +   N P G  WR   E     +    TYGDKV
Sbjct:  102 YLQSRAAQLSRHEAAAKEANLPWRIVAASIVERHPIIMKEPEDWEAAYMEMQEEIAKHGKVFPPELNLMGQAAELDRSDDEVLPELPFKLAPRVTKADRLNDRTTLNRALAERLFLLIRGPVTRGRWDLPMAVLEGGGKGGDMKGLSMRKTHEATVRRFL----------GDKFEAYVPSNAPVGMHWRVPSEPSTGKTGGEQTYGDKV 300          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: A0A2P6VD62_9CHLO (Serine threonine-kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VD62_9CHLO)

HSP 1 Score: 92.4 bits (228), Expect = 9.350e-17
Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 0
Query:   95 ALILERLPVIVEEYPDWQRDFWNLQAQQAHYGPKFPAEMGFKYDDEKPLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAGWRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAG 242
            A++ ERLPV+V E P+W+R+++  Q   A    K+  E+  ++ D K   M++    S  P APR T AD +NDR +L R LD+RL ++++ K   GW LP+     GET+RQTAER         A +     +  + +FVGN PAG
Sbjct:   52 AVVFERLPVVVPEDPEWEREYFEWQDGLAG---KYRKELPREFTDLKDSEMKEDAGASYEP-APRVTAADHANDRRSLKRRLDQRLFMLVRQK--GGWTLPQQENAEGETMRQTAER---------ALADAVELEAVRPYFVGNAPAG 184          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: A0A5J4Y1U0_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y1U0_9CHLO)

HSP 1 Score: 88.2 bits (217), Expect = 1.170e-16
Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = 0
Query:   95 ALILERLPVIVEEYPDWQRDFWNLQAQQAHYGPKFPAEMGFK----YDDEKPLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAGWRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAGWFWR 246
            A +LERLPVI+ E P+W+ DF   +A+  + G K   E   K    Y+ E      Q  +      APR T AD + D  +L R LD+RL L++K K  + W+ P++   AGET+RQTAER      LK    +G +      +FVGN P G  ++
Sbjct:   45 ACVLERLPVIMPEVPEWETDFLEWKAELQNRGNKELPEEFTKGKTTYESEDGEGATQQWQP-----APRETEADVAMDTKSLRRRLDQRLFLLVKTKGDSSWQFPQAESSAGETMRQTAERA-----LKETIQQGPK-----TYFVGNAPMGHVYQ 185          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: A0A2P6TJ63_CHLSO (Glycosyl group 1 family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJ63_CHLSO)

HSP 1 Score: 90.5 bits (223), Expect = 3.350e-16
Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 0
Query:   95 ALILERLPVIVEEYPDWQRDFWNLQAQ-QAHYGPKFPAEMGFKYDDEKPLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAGWRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAG 242
            A +LERLPV+V E P W+++F+  QA  +A Y  + P E    + D K   ++   + S    A R T AD +NDR +L R LD+RL +++KPK G  W L +     GET+RQTAER         A +        Q +FVGN PAG
Sbjct:   56 ACVLERLPVVVPESPAWEQEFFEWQASVRAKYMKQLPPE----FTDVKESEVQG--DASSYEPASRETEADRTNDRRSLQRRLDQRLFMLVKPK-GGSWALMQRENVEGETMRQTAER---------ALADAVDTSAVQPYFVGNAPAG 188          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: E1ZJP2_CHLVA (MRP-L46 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJP2_CHLVA)

HSP 1 Score: 85.1 bits (209), Expect = 1.960e-15
Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 0
Query:   97 ILERLPVIVEEYPDWQRDF--WNLQAQQAHYGPKFPAEMGFKYDDEKPLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAG---WRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAG 242
            +LERLPVI+ + P+W+++   W  QA    Y    P +     D E+    +      P   APR T AD++NDR +L R LD+RL ++++PK G+G   W L +   + GET+RQTAER         A ++   + V Q +FVGN PAG
Sbjct:   61 VLERLPVIIPDPPEWEQEHREWQ-QAITEKYFKVLPKDFVELKDSERQAD-DAGARYEP---APRITAADKANDRRSLQRRLDQRLFMLVRPKGGSGGGAWSLMQRENQEGETMRQTAER---------ALAECVDESVVQPYFVGNAPAG 197          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: V4A4N9_LOTGI (MRP-L46 domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A4N9_LOTGI)

HSP 1 Score: 82.4 bits (202), Expect = 1.300e-14
Identity = 63/204 (30.88%), Postives = 95/204 (46.57%), Query Frame = 0
Query:   90 WDIKSALILERLPVIVEEYPDWQR---DFWN--------------------LQAQQAHYGP------KFPAEMGFKYDDEKPLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAG--WRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAGWFWRTAKEEERPNSTYGDKV 262
            WD+  A+ LER P+I +E  D+++   DF +                    L A++           + P EM  + +D+    +E+         APRRT ADE +DR + +R LDE+L+LI+K +LG    W LP S W  GE++RQTA R              Q  D  +  F+GN P G+F +    ++  N + G KV
Sbjct:    1 WDLFGAVCLERRPIITKEMTDYEKKMSDFLSKLELENSLLSDHELRFRDDKLHAKRIKLEELTVEELENPREMAVEAEDKWKTELEEFT------FAPRRTVADEKDDRKSTERKLDEKLILIVKQRLGKTDVWALPHSQWLDGESMRQTANRALD----------SQCGDQIKSCFIGNAPCGFF-KYKYPKKVVNESIGRKV 187          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: UPI001B7E6674 (39S ribosomal protein L46, mitochondrial isoform X1 n=2 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E6674)

HSP 1 Score: 82.8 bits (203), Expect = 2.280e-14
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = 0
Query:  163 ADESNDRTTLDRALDERLLLIIKPKLGAG--WRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAGWFWRTAKEEERPNSTYGDKV 262
            AD+ ND++TL+R LDE+L+L++K K+G    W LP+S W+ GET+RQTAERT     L T + + +     Q  F+GN PAG++     +  R +ST G KV
Sbjct:  149 ADKKNDKSTLNRRLDEKLILLVKEKVGDEGIWLLPQSEWKPGETMRQTAERT-----LSTLSGRNE----LQAIFLGNAPAGFYKYKYPKTVRTSSTVGAKV 241          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: UPI001ABDC5A1 (39S ribosomal protein L46, mitochondrial isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001ABDC5A1)

HSP 1 Score: 82.0 bits (201), Expect = 3.430e-14
Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = 0
Query:  138 DDEKPLTMEQVLEQS------PVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAG--WRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAGWFWRTAKEEERPNSTYGDKV 262
            ++E+ + M Q LE +       + LAPR T ADE NDRT+L+R L+  L+L++K K+G    W  P+  W AGET+RQTAER    +           D+  + HF+GN P G++     +  R     G KV
Sbjct:  107 EEEQDIVMAQDLEDTWEQKWKQMKLAPRVTEADEKNDRTSLNRKLENNLVLLVKEKIGNEDIWMFPQIEWVAGETMRQTAERALSDL----------SDNRVEAHFLGNAPCGFYKYKFPKTMRNEDIVGAKV 229          
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Match: A0A8C4QFN1_EPTBU (Mitochondrial ribosomal protein L46 n=3 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QFN1_EPTBU)

HSP 1 Score: 81.3 bits (199), Expect = 6.950e-14
Identity = 64/201 (31.84%), Postives = 95/201 (47.26%), Query Frame = 0
Query:   85 RLGLDWDIKSALILERLPVIVEEYPDWQRDFWN----LQAQQ----------AHYGPKFPAEMGFKYDDEKPLTMEQVLEQ-----SPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAG----WRLPESAWEAGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAGWFWRTAKEEERPNSTYGDKV 262
            R    W + +A  +ERLPV+ +E  D +  +W     L+ QQ          A    K  + +    DD + L+   V EQ     +    APRRT ADE  DR+T  R L ++L+L+ + +L A     W LP++ W  GE++RQTAER      L TA       D  +  F+GN PAG++        R  ++ G K+
Sbjct:   46 RPAAPWRLFAAACVERLPVVSQERSDIEDRYWRFVQQLELQQSVLSDHEVRLAMEAQKLRSGILEDDDDLETLSGLDVEEQYEKKFNSFVTAPRRTEADELGDRSTHQRCLPDKLVLLFREQLAADAPLTWCLPQAEWMPGESLRQTAERA-----LITAAG-----DNLEAKFLGNAPAGFYKYKFPSNVRTENSIGGKI 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.103.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q3_ECTSI6.880e-13877.19Mitochondrial ribosomal protein L46 isoform 2 n=2 ... [more]
W7TRZ1_9STRA1.050e-2134.45Mitochondrial ribosomal protein l46 n=2 Tax=Nannoc... [more]
A0A2P6VD62_9CHLO9.350e-1738.51Serine threonine-kinase n=1 Tax=Micractinium condu... [more]
A0A5J4Y1U0_9CHLO1.170e-1637.18Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
A0A2P6TJ63_CHLSO3.350e-1639.60Glycosyl group 1 family n=1 Tax=Chlorella sorokini... [more]
E1ZJP2_CHLVA1.960e-1537.75MRP-L46 domain-containing protein n=1 Tax=Chlorell... [more]
V4A4N9_LOTGI1.300e-1430.88MRP-L46 domain-containing protein (Fragment) n=1 T... [more]
UPI001B7E66742.280e-1444.1239S ribosomal protein L46, mitochondrial isoform X... [more]
UPI001ABDC5A13.430e-1436.8439S ribosomal protein L46, mitochondrial isoform X... [more]
A0A8C4QFN1_EPTBU6.950e-1431.84Mitochondrial ribosomal protein L46 n=3 Tax=Eptatr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 168..268
e-value: 3.6E-16
score: 61.1
IPR04000839S ribosomal protein L46, mitochondrialPANTHERPTHR1312439S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDcoord: 47..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig153contigP-littoralis_Contig153:367957..383953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig153.103.5mRNA_P-littoralis_Contig153.103.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig153 367379..384255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig153.103.5 ID=prot_P-littoralis_Contig153.103.5|Name=mRNA_P-littoralis_Contig153.103.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=344bp
MMLGRCSMLASSAARRARLYPTTMFGGLCYREMSAPSNLSTKQQMKGFTI
KDHRPPRPRVAKEKRKQYLEQRKASFEVEQEKATRLGLDWDIKSALILER
LPVIVEEYPDWQRDFWNLQAQQAHYGPKFPAEMGFKYDDEKPLTMEQVLE
QSPVPLAPRRTPADESNDRTTLDRALDERLLLIIKPKLGAGWRLPESAWE
AGETIRQTAERTAQQVLLKTATSKGQRDDVAQLHFVGNCPAGWFWRTAKE
EERPNSTYGDKVNRAFELSSCKRTDDPETLLSLRYGEASATGSGSCSMFF
GRDLTHRMLVATAVRCCPCCTRFHEKSTRKPEIALGLPMQKCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040008MRPL46