prot_P-littoralis_Contig153.50.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig153.50.5
Unique Nameprot_P-littoralis_Contig153.50.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length385
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig153.50.5 vs. uniprot
Match: D7G8S2_ECTSI (Molecular chaperone, heat shock protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8S2_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 3.530e-43
Identity = 174/263 (66.16%), Postives = 189/263 (71.86%), Query Frame = 0 
Query:    9 MTRCPVCDATGKTGTTLGFGGTICALCHGTCYLRTEPNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKPHGRXIXXNFSSFLANYFIKCINCNGIRRVLISVPQPQHLCPRCNSTGRFRGQSCTLCGGNGVIHHEVASXXXXXXXGEIKRTLSLLRGNQSCPTCLGQGYFTVFGGSISPAPPQKRKKGKRGRGSDDEGDDE---SSDGRA-GHKVLGGSDPRPR 267
            MTRCPVC+ +GKTGTTLGFGGT CALCHG C+LRTEPNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      X XX  SS L  Y  KCIN                       TGR RG  CTLC G+GVIHH+VA+       GE+KRTLSLL GNQ+CPTC GQGYF ++G        Q   KGKRGR  +DE DD+   S DGRA G +V+GGS+PRPR
Sbjct:    1 MTRCPVCEGSGKTGTTLGFGGTTCALCHGKCFLRTEPNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSSSLYKYLFKCINXXXXXXXXXXXXXXXXX----XXTGRLRGYGCTLCSGHGVIHHDVAACANCNGAGEVKRTLSLLLGNQTCPTCQGQGYFAIYGAPARAM--QLPNKGKRGR--EDEDDDQGGGSEDGRAEGGRVVGGSEPRPR 255
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig153.50.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8S2_ECTSI3.530e-4366.16Molecular chaperone, heat shock protein n=2 Tax=Ec... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.20.20.10coord: 145..184
e-value: 2.0E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..270
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 168..218
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 65..124
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 118..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig153contigP-littoralis_Contig153:143200..156579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig153.50.5mRNA_P-littoralis_Contig153.50.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig153 142755..157788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig153.50.5 ID=prot_P-littoralis_Contig153.50.5|Name=mRNA_P-littoralis_Contig153.50.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=385bp
MLSPPTVQMTRCPVCDATGKTGTTLGFGGTICALCHGTCYLRTEPNPCPC
CDANGGFPSLFGLRWDTCRLCHGVKYLMDKPLPCPKCRATGQIRGMGGLF
STPCDLCDRQCYIRKPHGRCIKCNFSSFLANYFIKCINCNGIRRVLISVP
QPQHLCPRCNSTGRFRGQSCTLCGGNGVIHHEVASCAKCGGAGEIKRTLS
LLRGNQSCPTCLGQGYFTVFGGSISPAPPQKRKKGKRGRGSDDEGDDESS
DGRAGHKVLGGSDPRPRGRRSNRRAGNHRPSVSRADQATRRRERLKPKAT
EVREFSVRGWRGRPEPRKGSAGGWVSDLRLRFGLGGGLISSTAMLASSAL
SIFERAPPRACGRRSRVMATIFQADGHRLVLVYL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf