prot_P-littoralis_Contig153.15.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig153.15.6
Unique Name	prot_P-littoralis_Contig153.15.6
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	249

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig153.15.6 vs. uniprot
Match: A0A6H5KRG9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG9_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 2.330e-48
Identity = 99/190 (52.11%), Postives = 121/190 (63.68%), Query Frame = 0

Query:    5 VEDNQLEVGCLHVGLLAVRNMKQIKQGGMGGLFGLTPQHKPYCKITLGKHEFTSGVGARTTAGHAWNREQMFFPVKVPISCVVGVSEQWHETARSKSSDSRESYLNRQGGGKGTTGAPGCTSSGWRRDQATVGAKSXXXXXXXXXXXXXXXXXXXXCGSSLSRATAATNEAAAHDVWSQLTLRVQVYHRE 194
            VED  LEVG LHVGL+A R++K++KQGG+  + GL+PQ  PYC+ TLG++EFTSGVG RTT GH+WNREQ+FFPVKVPISCV+G S Q + TA S S  S     NR+ G KG   A   T  G  +     G+ S                    CGSSLSRA AA + AAAH VW+ L+LR QV+HRE
Sbjct:    6 VED-MLEVGSLHVGLIAARDVKRVKQGGVSDMLGLSPQASPYCRFTLGEYEFTSGVGVRTTGGHSWNREQIFFPVKVPISCVIGGSGQSYHTAGSGSDGSS---TNRRKGTKGPRKA--ATPGGQPKSGGKGGSGSVA------------------CGSSLSRAVAA-DAAAAHGVWNHLSLRAQVFHRE 170

[Close]

BLAST of mRNA_P-littoralis_Contig153.15.6 vs. uniprot
Match: D7G3T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T3_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.450e-44
Identity = 94/185 (50.81%), Postives = 116/185 (62.70%), Query Frame = 0

Query:   10 LEVGCLHVGLLAVRNMKQIKQGGMGGLFGLTPQHKPYCKITLGKHEFTSGVGARTTAGHAWNREQMFFPVKVPISCVVGVSEQWHETARSKSSDSRESYLNRQGGGKGTTGAPGCTSSGWRRDQATVGAKSXXXXXXXXXXXXXXXXXXXXCGSSLSRATAATNEAAAHDVWSQLTLRVQVYHRE 194
            L VG LHVGL+A R++K++KQGG+  + GL+PQ  PYC+ TLG++EFTSGVG RTT GH+WNREQ++FPVKVPISCVVG S Q + TA S S  S     N +GG KG   A   T  G  +     G+ S                    C SSLSRA A  + AAAH VW+QL+LR QV+HRE
Sbjct:    2 LGVGSLHVGLIAARDVKRVKQGGVSDMLGLSPQASPYCRFTLGEYEFTSGVGVRTTGGHSWNREQIYFPVKVPISCVVGGSGQSYHTAGSGSDGSS---TNTRGGTKGPRKA--ATPVGQPKSGGEGGSGSVA------------------CRSSLSRAVANADAAAAHCVWNQLSLRAQVFHRE 163

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig153.15.6 vs. uniprot

BLAST of mRNA_P-littoralis_Contig153.15.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KRG9_9PHAE	2.330e-48	52.11	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
D7G3T3_ECTSI	1.450e-44	50.81	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig153	contig	P-littoralis_Contig153:57149..62441 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig153.15.6	mRNA_P-littoralis_Contig153.15.6	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig153 57149..62614 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig153.15.6 ID=prot_P-littoralis_Contig153.15.6|Name=mRNA_P-littoralis_Contig153.15.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=249bp
MPTAVEDNQLEVGCLHVGLLAVRNMKQIKQGGMGGLFGLTPQHKPYCKIT
LGKHEFTSGVGARTTAGHAWNREQMFFPVKVPISCVVGVSEQWHETARSK
SSDSRESYLNRQGGGKGTTGAPGCTSSGWRRDQATVGAKSGGRSGGDDHG
GDGGGAGGVACGSSLSRATAATNEAAAHDVWSQLTLRVQVYHREDSAVAA
KTGGGGGGGGGGGGSSSSGITSAEIRTATPGEEDDDNNNNNSNSNNDND