prot_P-littoralis_Contig152.84.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig152.84.1
Unique Nameprot_P-littoralis_Contig152.84.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length296
Homology
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BLAST of mRNA_P-littoralis_Contig152.84.1 vs. uniprot
Match: A0A6H5JPM0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPM0_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.250e-6
Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = 0 
Query:    1 MRDERLRQVALLGDWTGGGARYPGGQEFDWLKRLQEDLEAFGIIIDNKKG-WEATAERVDEWDGKIDENVGRLMHEWFKRRGEFKETRRLKRERDA 95
            M D RL +  LLG   GG   Y GGQE DW+ RL +DL AF +  + + G W+ +A+  + W  K+++     M +W ++  E     +  RE +A
Sbjct: 1475 MEDNRLPKHMLLGGMAGG-VGYRGGQESDWVSRLDQDLVAFNMGEEKEGGKWKESAKDPEVWYNKVEDGAAWFMRKWHRQEAEASAKHQRAREAEA 1569
[Close]
BLAST of mRNA_P-littoralis_Contig152.84.1 vs. uniprot
Match: A0A6H5JXP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP5_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.730e-6
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 0 
Query:    1 MRDERLRQVALLGDWTGGGARYPGGQEFDWLKRLQEDLEAFGIIIDNKKG-WEATAERVDEWDGKIDENVGRLMHEWFKRRG 81
            M D RL +  LL    GG   Y GGQE DW+ RL+EDL AF +  + + G W+ +A+  + W  K+++   RLM +   + G
Sbjct:    3 MEDNRLPKRMLLRAMAGG-VGYRGGQESDWVSRLEEDLVAFNMGDEKEGGKWKESAKDPEVWYNKVEDGAVRLMRKQMAQAG 83
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig152.84.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPM0_9PHAE1.250e-634.38Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JXP5_9PHAE1.730e-637.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig152contigP-littoralis_Contig152:383132..384019 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig152.84.1mRNA_P-littoralis_Contig152.84.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig152 382969..384022 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig152.84.1 ID=prot_P-littoralis_Contig152.84.1|Name=mRNA_P-littoralis_Contig152.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=296bp
MRDERLRQVALLGDWTGGGARYPGGQEFDWLKRLQEDLEAFGIIIDNKKG
WEATAERVDEWDGKIDENVGRLMHEWFKRRGEFKETRRLKRERDAPEGQA
LAKRGRMDSGDEREEGCGRPKGQQGCSGVHVARQREQPKAKLRCGRIGKP
VGQKSRSGVAAAPQLLCTVVAVTGGMRVRMRRASVNRQTSCEASLRLMAC
FLFIFPFPISHVSLCSQCLSLILFSASALLTLPRSLSPFLPPFSYPRLSS
PLFPGLLLLTLFSFFVVLSDCNNICWAPRSGLHWFCLGYVLWLVG*
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