prot_P-littoralis_Contig152.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig152.12.1
Unique Name	prot_P-littoralis_Contig152.12.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	185

Homology

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 8.850e-111
Identity = 167/186 (89.78%), Postives = 171/186 (91.94%), Query Frame = 0

Query:    1 MFRRASALVGRVVVRARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF--ANKKKDDDWTVLKRP 184
            M RR S+LVGR  VR R VHTEAKLKE+GIELP+PK PLGNFVMTVRTGNLLYTSGHLP SLEGE TTGKVGQE+NEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGF GQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF    KK DDDWTVLKRP
Sbjct:    1 MLRRVSSLVGRAAVRPRRVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDGGKKGDDDWTVLKRP 186

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.420e-67
Identity = 101/156 (64.74%), Postives = 129/156 (82.69%), Query Frame = 0

Query:   13 VVRARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVE 168
            +  ++ +HTEAKL EMG++LPSP  P GNF M V++G ++Y SGHLP    G++ TGKVG EV+ EEAQ AA+ +A+ L++S+KK++GDLDRV RIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE
Sbjct:   26 IAGSQKIHTEAKLTEMGLKLPSPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVE 181

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 211 bits (537), Expect = 4.220e-66
Identity = 100/156 (64.10%), Postives = 128/156 (82.05%), Query Frame = 0

Query:   13 VVRARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVE 168
            +  ++ +HTEAKL EMG++LP P  P GNF M V++G ++Y SGHLP    G++ TGKVG EV+ EEAQ AA+ +A+ L++S+KK++GDLDRV RIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE
Sbjct:   77 IAGSQKIHTEAKLTEMGLKLPPPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVE 232

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 203 bits (517), Expect = 7.620e-64
Identity = 94/154 (61.04%), Postives = 123/154 (79.87%), Query Frame = 0

Query:   16 ARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF 169
            ARGVHTEAK++EMG++LP+P  P  N++M  R GNLL+T+GHLP+  +G++  GKVG++   EEA  AAR+ A+ ++ ++K ++GDLD+V R+VKL GFVNC D F+ QPKV+NGASD   EV GERGVH RSAVGTNALPMNVPVE+EAI+E 
Sbjct:   24 ARGVHTEAKIEEMGLKLPTPPTPAANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEI 177

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.350e-63
Identity = 95/154 (61.69%), Postives = 125/154 (81.17%), Query Frame = 0

Query:   17 RGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFA 170
            RGV  EA+L + GI+L  P PP GN+V  VR+GN L+ +GH+P+  +  +  GKVG++V  E+A   AR+VAI +++++K +LGDLDRVTRIVKLVGFVNCTD FTGQP V+NGASDLF EVFG++GVH+RSAVGTNALP+ +PVEIEA++EF+
Sbjct:   19 RGVQIEARLAQRGIQLSDPVPPKGNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGKKGVHARSAVGTNALPLGIPVEIEAVIEFS 172

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A485KSR4_9STRA (Aste57867_10922 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR4_9STRA)

HSP 1 Score: 198 bits (503), Expect = 8.130e-62
Identity = 98/172 (56.98%), Postives = 125/172 (72.67%), Query Frame = 0

Query:    1 MFRRASALVGRVVVRARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFANK 172
            MFR A A         R VHTE ++KE+G  LP+   P GN+   VR+GNLL+T+GHLP    GE+  GKVG+++  E+  EAAR VA+ + A++K++LGDLDRV RIVK+VGFVNC DGFT QP V+NG SD   E+FGERGVH+RSAVGTNALP+ +PVE+E IVE  +K
Sbjct:    1 MFRSAVAAFKPAAAAVRRVHTENRIKELGYTLPAVATPKGNYRNVVRSGNLLFTAGHLPQPAGGELIKGKVGEDLTAEQGYEAARHVALAVCATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGFSDTVGEIFGERGVHARSAVGTNALPLGIPVEVECIVEVEDK 172

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 196 bits (498), Expect = 6.660e-61
Identity = 92/157 (58.60%), Postives = 126/157 (80.25%), Query Frame = 0

Query:   14 VRARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFA 170
            V  RGVHTEAKL+++G  LP    P G++ + VR+GN ++T+GHLP    G++  GKVG +++ EEA +AA+  A+ ++A++K +LGDLDRV R+VK+VGFVNC DGF  QP+V+NGASDLFAEV GERG+H+RSAVGTN+LP+N+PVE+EAIVE +
Sbjct:   26 VLMRGVHTEAKLEKLGYTLPQVASPKGSYQLCVRSGNQMFTAGHLPQPANGDLLVGKVGVDLSVEEANKAAQYCALSILATLKAELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEIS 182

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 7.450e-61
Identity = 94/150 (62.67%), Postives = 121/150 (80.67%), Query Frame = 0

Query:   19 VHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVE 168
            V  EA+L ++GI+LP    P GN+ + VRTGNLL+ +GH+P+   G + TGKVG + + EE QEAA+ +AI L+A++K +LGDLD+V RIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE
Sbjct:    2 VQIEARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVE 151

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 196 bits (497), Expect = 1.220e-60
Identity = 93/154 (60.39%), Postives = 124/154 (80.52%), Query Frame = 0

Query:   16 ARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF 169
            A GVHTEAKL+E+G+ELP P     N++++VR+G+ ++T+GHLP+  +G + +GKVG ++N EEA  AA  V + +++++K +LGDLDRV RIVKL GFVNC D F+ QPKV+NG SDLF +VFG RGVH+RSA+GTNALP+NVPVEIEAIVE 
Sbjct:   26 ACGVHTEAKLEELGLELPPPGKAQANYILSVRSGDTIFTAGHLPMMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAELGDLDRVKRIVKLNGFVNCVDSFSAQPKVINGISDLFGKVFGARGVHARSALGTNALPLNVPVEIEAIVEL 179

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BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Match: A0A6S9K1N5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K1N5_HETAK)

HSP 1 Score: 195 bits (495), Expect = 1.570e-60
Identity = 94/171 (54.97%), Postives = 131/171 (76.61%), Query Frame = 0

Query:    1 MFRRASALVGR---VVVRARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGNLLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVE 168
            + RRA+ ++ +   +V  AR +H E +++E+G +LP  KPP GNFV+  R GNLLYT+GHLP   +G++  GKVG++V+ + A +AA+ V + ++A++K ++GDLDRV  +VKL+GFVNC DGF  QP+VVNG SDL  E+FG++G HSRSAVGTNALP+NVPVEIEAI E
Sbjct:    4 LLRRANGVIPKSSVLVNAARQIHIEQRIEELGYKLPEMKPPAGNFVLVKRIGNLLYTAGHLPQPADGDLMLGKVGEDVDMDTAYKAAQCVGLNILATVKAEVGDLDRVRNVVKLMGFVNCPDGFRAQPQVVNGCSDLMVEIFGDKGRHSRSAVGTNALPLNVPVEIEAIFE 174

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig152.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXY4_9PHAE	8.850e-111	89.78	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR9_9STRA	1.420e-67	64.74	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
W7TB75_9STRA	4.220e-66	64.10	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A5A8CF06_CAFRO	7.620e-64	61.04	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A835Z1E3_9STRA	1.350e-63	61.69	Putative translation initiation inhibitor n=1 Tax=...	[more]
A0A485KSR4_9STRA	8.130e-62	56.98	Aste57867_10922 protein n=1 Tax=Aphanomyces stella...	[more]
A0A2R5GI79_9STRA	6.660e-61	58.60	Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID...	[more]
A0A4D9CNR0_9STRA	7.450e-61	62.67	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A812PJA3_9DINO	1.220e-60	60.39	TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2...	[more]
A0A6S9K1N5_HETAK	1.570e-60	54.97	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 22..164 e-value: 3.0E-29 score: 102.1
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	CDD	cd02199	YjgF_YER057c_UK114_like_1	coord: 27..168 e-value: 8.01691E-75 score: 219.254
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 11..169 e-value: 4.4E-62 score: 210.4
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 21..168
None	No IPR available	PANTHER	PTHR43760	ENDORIBONUCLEASE-RELATED	coord: 20..169

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig152	contig	P-littoralis_Contig152:46477..52655 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig152.12.1	mRNA_P-littoralis_Contig152.12.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig152 45789..52706 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig152.12.1 ID=prot_P-littoralis_Contig152.12.1|Name=mRNA_P-littoralis_Contig152.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=185bp
MFRRASALVGRVVVRARGVHTEAKLKEMGIELPSPKPPLGNFVMTVRTGN
LLYTSGHLPISLEGEMTTGKVGQEVNEEEAQEAARKVAIQLIASIKKDLG
DLDRVTRIVKLVGFVNCTDGFTGQPKVVNGASDLFAEVFGERGVHSRSAV
GTNALPMNVPVEIEAIVEFANKKKDDDWTVLKRP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf