mRNA_P-littoralis_Contig1018.7.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1018.7.2
Unique NamemRNA_P-littoralis_Contig1018.7.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: A0A6H5JGV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV1_9PHAE)

HSP 1 Score: 478 bits (1230), Expect = 4.310e-167
Identity = 242/325 (74.46%), Postives = 271/325 (83.38%), Query Frame = 2
Query:  140 MSRRPNAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLTQDCVGGARTGGM-----KTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAISYCERNSGRK 1099
            M+RRP AYQSN+ E  M+ALS KLSADLRG+IRALGAFP+LSDEWCKMATALGRIA+ISEAEA+LTQDC+ G R  G      KTLWEGE    EMALRY+LEDGKLNVCLRNL EWRK HR R + G    ++ P V+ESLD+FEKGMGT+LRNAWTH+EALQTTDIPLLVEYVTGV +DAA+NPG V+DMS RGDLAGRQE+VCLSYLRGL+SCL+++EEGRVMPHLR A T SCLA ML  NHRHLG+EA+ VGAEALA +CGTEDFITYRE YI N+ A  AFASLKED V  LCED +ERK LRPLLDAISYC R S RK
Sbjct:    3 MARRPQAYQSNNGEDSMEALSTKLSADLRGNIRALGAFPLLSDEWCKMATALGRIAEISEAEARLTQDCIEGERKEGERKDCPKTLWEGE----EMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMSLRGDLAGRQEIVCLSYLRGLVSCLSDYEEGRVMPHLRGAETVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYREEYI-NDAARVAFASLKEDFVEKLCEDSQERKILRPLLDAISYCRRKSSRK 322          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: D7G0I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I2_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 3.260e-137
Identity = 208/304 (68.42%), Postives = 235/304 (77.30%), Query Frame = 2
Query:  140 MSRRPNAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLR 1051
            M+RR +AY S + E  M+ALS KLSADLRG+IRALGAFP+LSDEWCKMATALGRIA+ISEAE                           EMALRY+LEDGKLNVCLRNL EWRK HR R + G    ++ P V+ESL++FEKGMGT+LRNAWTH+EALQTTDIPLLVEYVTGV +DAA+NP  V+DMS RGDLAGRQE+VCLSYLRGL+S L++HEEGRVMPHLR AGT SCLA ML  NHRHLG+EA+ VGAEALA +CGTEDFITYRE YID E     FASLKED V  LCED +ERK LR
Sbjct:    2 MARRLHAYHSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIAEISEAE---------------------------EMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLNSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPDAVEDMSLRGDLAGRQEIVCLSYLRGLVSRLSDHEEGRVMPHLRGAGTVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYREEYID-EATRVTFASLKEDFVEKLCEDSQERKILR 277          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: A0A7S2V4C5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C5_9STRA)

HSP 1 Score: 244 bits (622), Expect = 3.040e-75
Identity = 141/315 (44.76%), Postives = 192/315 (60.95%), Query Frame = 2
Query:  155 NAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGA----DHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREA-YIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAISYCER 1084
            N Y S   +  + ALS  LS DLR +IRALG+FPVLSD W  MA   GRIA+IS+ E+KL +D           TLWE E    E+ALRY+LEDGKLN+CLRNL E++   R+  N  A    DH D+       LDAFEKG+G +LRNAW H+EA+QTTD+PLL+ Y+  V++DA  NP  ++   + G+L  RQEVV + YL  L++ + E  E RVMP ++     S L +++  +H  L         +AL+ IC TEDF TY++  Y++  E     +SL  D++ DL ED + R+K+RPLLD I   +R
Sbjct:    5 NRYMSKCDDDDIFALSKTLSNDLRTAIRALGSFPVLSDSWNGMADTFGRIANISDMESKLPKDSENA-------TLWECE----ELALRYLLEDGKLNLCLRNLVEFKNFERELRNAPATLPTDHRDK-------LDAFEKGLGCVLRNAWRHVEAIQTTDLPLLINYIGDVMEDAVRNPTRLESFQKAGELEKRQEVVVIYYLASLMTQVDEVSEDRVMPLIKERRLFSLLVSVMHAHHAKLNEGDLLAALKALSLICDTEDFSTYKDTEYLEETEEKEMLSSLHTDVIEDLTEDWDTRRKIRPLLDYIREVQR 301          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: A0A835YQR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR7_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.340e-66
Identity = 121/270 (44.81%), Postives = 171/270 (63.33%), Query Frame = 2
Query:  281 MATALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAISYCERNS 1090
            MA  LGR+A I+E E+KL        R    +TLWEGE    E ALRY++EDGKLN+CLRNL ++ K +  +    +D  + E    + +D FEKGMG +LRNAW H+EALQTTD+P LV ++T V  DAA++P   + ++Q  D+  RQEV+C+ YL G++  + E  E RVMP LR+AGT   LA ML + H  LG +A  +G   L   CGTEDF TYR+ ++   +    F +L++  + DLC+DP+ +++ RPLLD  S+C R +
Sbjct:    1 MAQTLGRVASITEMESKLP-------RASSRQTLWEGE----EQALRYVIEDGKLNICLRNLVDF-KAYEMKLR--SDDVEPEQRQKDLMDKFEKGMGCMLRNAWNHVEALQTTDMPALVNHITTVFSDAADSP---ERVAQLTDITDRQEVLCMYYLHGMVGQMEEMSEERVMPMLRAAGTLVALARMLSSCHAALGRDARELGTVCLGLACGTEDFATYRDKHVPPADR-GVFVALRDAYLLDLCQDPDAKRRARPLLDFTSFCVRTA 252          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: A0A485L431_9STRA (Aste57867_15868 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L431_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.490e-66
Identity = 129/303 (42.57%), Postives = 172/303 (56.77%), Query Frame = 2
Query:  161 YQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAI 1069
            Y+       ++ LS KL+ADLR  IR LG +PVLS+EW +MA  + R  +ISE E  L +            TLWE E    E+ALRYILEDGKLN+CLR L E++         G  H + +    E +  FE+G+G +L+NAW H+EALQTTD+PLL+EYV  VL    E P  V+      DL   QEV+ + YL GL   L    E RVMP ++     + LA  LQ N +        VGAE LA IC TEDF T+ E+Y  +++      +++ED++ DL  D + RKKLRPLLD +
Sbjct:    7 YEKTCDVDSLEKLSQKLTADLRNHIRFLGDYPVLSNEWKEMAHNMRRFGEISEMERNLPKQ--------ENATLWECE----ELALRYILEDGKLNLCLRILVEYKSYEH-----GTAHREMDAETKEIVAMFERGLGVMLKNAWLHVEALQTTDLPLLIEYVASVLTFCEEEPAYVETK----DLEDSQEVIVMYYLHGLFKQLEHISESRVMPLVQEKNIFALLAAHLQRNWKSFSPSDVRVGAEVLALICDTEDFQTHSESYFPSDQTRRDLGAIQEDILEDLVADLDTRKKLRPLLDTV 288          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: A0A1V9ZS11_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS11_9STRA)

HSP 1 Score: 220 bits (561), Expect = 3.410e-66
Identity = 132/307 (43.00%), Postives = 178/307 (57.98%), Query Frame = 2
Query:  149 RPNAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAI 1069
            R   Y+ +S   G++ LS KL+ADLR  IR LG +P+LS+EW +MA  + R  +ISE E KL +            TLWE E    E+ALRYILEDGKLN+CLR L ++++  R          D +    E L  FE+G+G +L+NAW H+EALQTTD+PLLVEY+  VL    E P   K      DL   QEV+ L YL+GL   L +  E R+MP ++       +   LQ NHR L  E + V A+ LA IC TEDF T+ EAYI   EA      ++++++ +L  D + RK+LRPLLD +
Sbjct:    3 RLGRYEKSSDADGIEKLSAKLTADLRSHIRFLGDYPILSEEWKEMANNMTRFGEISEMERKLPKQ--------ENATLWECE----ELALRYILEDGKLNLCLRLLVDYKEYERNTIG-----RDFDAEAKELLLKFERGLGVMLKNAWLHVEALQTTDLPLLVEYIATVLTFCHEEPEFFKSK----DLEDSQEVIVLYYLQGLFKRLEDIGESRIMPLVQERQIFELVLWHLQHNHRSLSPEDTLVAADVLAQICDTEDFQTHPEAYITTAEARQDLLVVQDEVLDELVGDLDIRKRLRPLLDVV 288          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: A0A067CKH1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKH1_SAPPC)

HSP 1 Score: 212 bits (540), Expect = 4.750e-63
Identity = 131/317 (41.32%), Postives = 178/317 (56.15%), Query Frame = 2
Query:  149 RPNAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAISYCERNSGRK 1099
            R   Y+ +S   G++ L+ KL+ADLR  IR LG +P+LS EW +MA  + R  +ISE E +L +            TLWE E    E+ALRYILEDGKLN+CLR L E+++  R          D +    + L  FE+G+G +L+NAW H+EALQTTD+PLLVEY+  VL    E P   K      DL   QEV+ L YL GL+  L +  E R+MP L+       +   LQ NH     +   V AE LA IC +EDF T+  AY+   EA      ++E+++ DL  D + RK+LRPLLD +   +  +GRK
Sbjct:    3 RLGRYEKSSDADGIEKLTAKLTADLRNHIRFLGDYPILSTEWKEMARNMTRFGEISEMERQLPKQ--------ENATLWECE----ELALRYILEDGKLNLCLRLLVEYKEYERNTLG-----RDFDAEAKDLLLKFERGLGVMLKNAWLHVEALQTTDLPLLVEYIASVLTFCHEEPEFYKTK----DLEDCQEVIVLYYLHGLMKRLDDIGESRIMPLLQERQVFELVLWHLQHNHTSFSPDDVLVTAEVLAQICDSEDFQTHPTAYVATAEARQDLRVIQEEVLDDLATDLDIRKRLRPLLDVVK--DHGAGRK 296          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: W4FWN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN5_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.330e-62
Identity = 130/317 (41.01%), Postives = 178/317 (56.15%), Query Frame = 2
Query:  149 RPNAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAISYCERNSGRK 1099
            R   Y   +    ++ LS KL+ADLR  IR LG +PVLS EW +MA  + R  +ISE E  + +            TLWE E    E+ALRYILEDGKLN+CLR L E++         G    D +P   E +  FE+G+G +L+NAW H+EALQTTD+PLL+EYV GVL    E P  V    ++ DL   QE++ + YL GLL  L    E RVMP +      + LA+ +Q + +        V  E LA +C TEDF T+  +Y+ + +      +++ED++  L ED + RKKLRPLLD ++  E  SGRK
Sbjct:    3 RVTRYAKTADVDSLEKLSLKLTADLRNHIRFLGDYPVLSAEWREMARNMMRFGEISEMERHMPKQ--------DNATLWECE----ELALRYILEDGKLNLCLRLLVEYKDYEH-----GISQRDLDPEAKELISQFERGLGVMLKNAWLHVEALQTTDLPLLLEYVAGVLTFCEEEPAYV----EKKDLVDSQEILVVYYLHGLLKQLEHISEDRVMPLVLEKQLFALLASHIQRHWKSFSDTDVIVACEVLALLCDTEDFQTHGPSYVSSAQTCRDLRAIQEDILDGLMEDLDMRKKLRPLLDVVN--EFASGRK 296          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: A0A5D6XRR2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRR2_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.090e-60
Identity = 128/319 (40.13%), Postives = 177/319 (55.49%), Query Frame = 2
Query:  137 SMSRRPNAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLT--QDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEAST------VGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAI 1069
            S SR+ + Y     +   + LS KL+ADLR  +R +  +PVLSD+W KMA  +GRI DI+E E  L   QD           TLWE E    E+ALRY+LEDGKLN+CLRNL ++    ++    G      + S +E +  FE+GMG  L+NAW H EA+QTTDIPLL+EY+  +     ENP  + D      +   QE+  + +L GL   L   +E RVMP +      S LA  L  N   L V   +      VG EALA +C TEDF ++ + Y+D+ E  +A  +L+++ + D   D + RK+LRPLLD I
Sbjct:    2 STSRKAH-YAPKREQDTFEELSSKLTADLRAHVRFMADYPVLSDDWNKMAEQIGRIGDITEMERSLPKQQDA----------TLWECE----EIALRYLLEDGKLNLCLRNLVDYNDYLKRMIERGPI----KDSTMELMQKFERGMGLTLKNAWLHAEAVQTTDIPLLIEYIHSIFSYCLENPNYLADKK----MDNCQEITIVHFLLGLCKQLDAIDESRVMPLIIEKRIFSLLAMHLSMNIHLLTVSPDSQSADIAVGVEALALLCATEDFQSHSDRYVDSRETESALLTLRDEYLEDATADEDVRKRLRPLLDVI 297          
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Match: A0A024TTX0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TTX0_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.330e-60
Identity = 128/317 (40.38%), Postives = 177/317 (55.84%), Query Frame = 2
Query:  149 RPNAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMATALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDGKLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRNAWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVVCLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEASTVGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEERKKLRPLLDAISYCERNSGRK 1099
            R + Y+  +    ++ LS KL+ADLR  IR LG +PVLS EW +MA  + R  +ISE E +L +            TLWE E    E+ALRYILEDGKLN+CLR L E++         G    + +P     +  FE+G+G +L+NAW H+EALQTTD+PLL+EY+ GVL    E P  V    ++ DL   QE + + YL GLL  L    E RVMP +      + L + +Q + +        V  E LA IC TEDF ++ ++Y+ + +       ++ED++  L ED + RKKLRPLLD I   E  SGRK
Sbjct:    3 RVSRYERTAGVDSLEKLSQKLTADLRNHIRFLGDYPVLSTEWKEMAHNMKRFGEISEMERQLPKH--------ENATLWECE----ELALRYILEDGKLNLCLRLLVEYKDYEH-----GISQRELDPDTKALVSQFERGLGVMLKNAWLHVEALQTTDLPLLLEYIAGVLTFCEEEPVFV----EKKDLVDSQETIVVYYLHGLLKQLEHISEDRVMPLVLEKQLFALLTSHIQRHWKLFSDVDVLVACEVLALICDTEDFQSHAQSYVASAQVVRDLRIIQEDILDSLVEDLDVRKKLRPLLDVIK--EFASGRK 296          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1018.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGV1_9PHAE4.310e-16774.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0I2_ECTSI3.260e-13768.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V4C5_9STRA3.040e-7544.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835YQR7_9STRA1.340e-6644.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A485L431_9STRA2.490e-6642.57Aste57867_15868 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZS11_9STRA3.410e-6643.00Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067CKH1_SAPPC4.750e-6341.32Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
W4FWN5_9STRA1.330e-6241.01Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A5D6XRR2_9STRA2.090e-6040.13Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024TTX0_9STRA2.330e-6040.38Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1018contigP-littoralis_Contig1018:36362..46405 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G0I2
Model size1102
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons10
Evalue1.92e-138
EggNOG OGs2BYFE@1|root,2S2HC@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_002420.1
Cds size963
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1018.7.2prot_P-littoralis_Contig1018.7.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1018 36874..46405 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789356.6023612-UTR-P-littoralis_Contig1018:36361..364281680789356.6023612-UTR-P-littoralis_Contig1018:36361..36428Pylaiella littoralis U1_48UTRP-littoralis_Contig1018 36362..36428 +
1680789356.6116319-UTR-P-littoralis_Contig1018:36801..368731680789356.6116319-UTR-P-littoralis_Contig1018:36801..36873Pylaiella littoralis U1_48UTRP-littoralis_Contig1018 36802..36873 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789356.6196256-CDS-P-littoralis_Contig1018:36873..369781680789356.6196256-CDS-P-littoralis_Contig1018:36873..36978Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 36874..36978 +
1680789356.629762-CDS-P-littoralis_Contig1018:41247..413281680789356.629762-CDS-P-littoralis_Contig1018:41247..41328Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 41248..41328 +
1680789356.637638-CDS-P-littoralis_Contig1018:41775..418561680789356.637638-CDS-P-littoralis_Contig1018:41775..41856Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 41776..41856 +
1680789356.6455898-CDS-P-littoralis_Contig1018:42220..423491680789356.6455898-CDS-P-littoralis_Contig1018:42220..42349Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 42221..42349 +
1680789356.653587-CDS-P-littoralis_Contig1018:43090..432101680789356.653587-CDS-P-littoralis_Contig1018:43090..43210Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 43091..43210 +
1680789356.6616025-CDS-P-littoralis_Contig1018:43557..436351680789356.6616025-CDS-P-littoralis_Contig1018:43557..43635Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 43558..43635 +
1680789356.6746914-CDS-P-littoralis_Contig1018:44120..443331680789356.6746914-CDS-P-littoralis_Contig1018:44120..44333Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 44121..44333 +
1680789356.686987-CDS-P-littoralis_Contig1018:45462..455661680789356.686987-CDS-P-littoralis_Contig1018:45462..45566Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 45463..45566 +
1680789356.709457-CDS-P-littoralis_Contig1018:46353..464051680789356.709457-CDS-P-littoralis_Contig1018:46353..46405Pylaiella littoralis U1_48CDSP-littoralis_Contig1018 46354..46405 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1018.7.2

>prot_P-littoralis_Contig1018.7.2 ID=prot_P-littoralis_Contig1018.7.2|Name=mRNA_P-littoralis_Contig1018.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=321bp
MSRRPNAYQSNSPEGGMDALSDKLSADLRGSIRALGAFPVLSDEWCKMAT
ALGRIADISEAEAKLTQDCVGGARTGGMKTLWEGEASFSEMALRYILEDG
KLNVCLRNLEEWRKLHRQRCNDGADHADEEPSVVESLDAFEKGMGTILRN
AWTHIEALQTTDIPLLVEYVTGVLKDAAENPGVVKDMSQRGDLAGRQEVV
CLSYLRGLLSCLTEHEEGRVMPHLRSAGTASCLATMLQTNHRHLGVEAST
VGAEALAHICGTEDFITYREAYIDNEEATAAFASLKEDLVADLCEDPEER
KKLRPLLDAISYCERNSGRK*
back to top

mRNA from alignment at P-littoralis_Contig1018:36362..46405+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1018.7.2 ID=mRNA_P-littoralis_Contig1018.7.2|Name=mRNA_P-littoralis_Contig1018.7.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10044bp|location=Sequence derived from alignment at P-littoralis_Contig1018:36362..46405+ (Pylaiella littoralis U1_48)
CTTTGAATCAAACAACAACGGCCGCATCATCTACATATATACTCGGATAC TTCGTATATACATATAGGTGAGATGATATATTCATCGGCAGATTGTACTC GTATGTACTTGCAACCGGTTTCGTATCTACCATGTATCATGACATCGTCG CGAGTTCCTTGAAGTCACGAAATAGCCAAGCGCCAGGGGTCATTTTACTG TAGCTCTGAACCATCATCTATCCTCGCCTGTTATCTCTTCGGTGTATGAC AGTTGTACGTAAAGCTATCGTGAGTACTGCTGTATCTTGGAGTTCTAGAA CCGCCGGCTCTACATACAGGCAGTATTCGTTCTTGGAGTTCTACCACACG CCGCGCTGATGTACGTATATTTGAAGTATACCGAGTATAATATAACTGAG AGTAATCGAACTCGCTCAACGGCCCCCCGGTCCAACGCAGTCCTACGCAC TGTCGAAGAGCTGGAAATTTGGTGGTGCACTCTGGACAGCAGTACAGCTG AGCGCATAGAGCATGTCGAGGCGTCCTAATGCGTATCAATCGAATAGCCC GGAGGGTGGCATGGATGCCCTGTCAGACAAGCTTAGCGCCGATCTTCGCG GGAGCATTCGAGCACTGGTAAGTCTGTGTAAGTCATCAATACTCTACAGG GGTACTACTGTGCCATGAATGTTAATCCTCCTGAGCCTTAGCGAGGGTAG GATTGTGCATCAGAATTGAGCATTTTATTTTATTTTTATTATTCGGCCCG GACTACTGGATGCGGGGATCTTCTCCATCTGGCAAGGCTGTGATGAACGA AACAAGTTGGCCGCAACATCAACCGCGGGCAGGATAGACATGGTGTGCGT GCTTCGCAGAGGAAGCCGTTGGCATAGTGCCTCACAGCAAGCGGACAGCG GCTGCAGCAGCAGCAGCAGCCTAGGTGCGCTAGAGAGGCCGAAGGCCTGC GCCTCGAGGGGCTTAGAGATATGCATATGCAGAAAAAACAACTACTGCGG TAATTATCGTGGGAATGGGATTTTGGCGTTACCGCGCTTTTTCCATTATC CTAATCCTATACAATCAGTTACCGCAACAAAACAACAATCCCATTCTCAT TACCGCGAAAAATAATTATCCCGTTCCCGCGGGAAAAATTACCGTGAAAA TATCGCAAATACCGCGATTTCTGGTTACCGCCGTACTAATTACCGCAACA TTTACAAAGTCCCATTTACCGTGCGGTATAAGTCTATGAATTACCGCAAT CTCCGTCGATAGGTTTGAACGATAAGATAAGGCACCGCATCGAGCATTCT TCCCAACGCCGAGCAGGTTGAGGGTTCGAACCTGCAGACATGTACTTCGA AGTATAATTTATGACGTAGTTACTTGTTGTTCTTACTAGAGTCACCAACG AGGCCTGCAGCCTACTTGACGTCGTCGCCGAGGTAACCATTAAGGGAGCG CTGACACCCACCTCAGCCAGACCATGTTCGACATGAGGGAGATTCACGAG ATTTTCAGTGAGGACAGCCACGCCATCCGCAAACTAGACCAAGCCTACAA CAATGGTGTCGACGTGGAGACGGAAGAGATGGTCGAGGAAGACCTCACCG CGGAGGCTCAAAAGGTGCGGAGAGTTCTGCGCTCGAGGTTGGCCAAGAAA GAGCTTGGAACAGCCAGGATGCCCGTTGAGCGCATTTGCAAAGATTGTTC TGACGACCACTTCATCAACGGCGGCGAACCTCTCAAGTCCTCATCCATCG CTGACGTGAAGAACGTAGCCAAGACCTTCGTGGACCCGTCGAATGGGCCG GCTCCTTCATCAGCGACCGGGGGTAGCAGTGGGGCTGGCGGCAGCGGCAG CAACGACGACGGATCGAACCCGCCTGCGCCCAAGAAGCCGAAGCAGTCGC GCCTAATGGAGAGGCAACTCGAACGCCTCGCTAAGCGCAAGGAAGATGCC GCCAGCAGCAGCTCTGCATCGCCGGCGGCTGCCGTGCAGCGGGCGGCGCT CATTGAAAAGGAGCTGCAGCTGTACATGGCGAAAGACGTGCAACCCGAGG AGACCACGTTTTCCCTTCTACAGTTTTGGAAGCTTAGGAGGACAGGAATG CCGTTCTTGGCGCTCATCGCTCGGCTTTACAACGGGGTTGAGTCTACCAG TTGCCAGGCGGAGAATAACTTCTCAGCTCTTGCCTTCCTTATCGGCCACC TGCGCAGCTCAACCGCACCCGGCAAGGTCGAGCGACTGATGTTCCTGCGC CTCAACAGGCTATTCACCCCGGAAATCAAGGCTCTCCACGACGCCGTCGA AGCGAAGGAAGCAGCGGCAGACCGGTGCAAGGAAAGAGTTGGGCAAGTAG AGGCAGCAGCAGCGGGCTCCACTATTGACTTGAAGCTGTGATTCTGCTGT GTGCTGTTTACGATCATACGAAGTATAATATGGGTGTGTTGAAACTGCCG TTTTGCAGACGTTACTACTGTGTGGACATGCACTGTGTGGAGATGTGTCC ATGTGAAAACAGTAGTTTCTGGGACGGGGGTGGGCTCTTTCACGGCTTTT GTCTGGTAAGTTTTGGTTTATTTGGTTGAGAATAGTAGTCAACTCGTGGT GATGAAGTACTTCGTAAGTATGAAGTAGTTGACATGTTTCGGCCGTCTTC TGGTTATCGTCTTCTTGCTGTGAACGTACTCCCTTCGCCGCATCATACGC TGGTGGTACTGCTATATGTACATAACCCCGGCGGCTGATTACCGCCGTAA CAATTACCGTGGTGGTCAATTACCGTAGAAAAACACCGCAAAATTACCGC GGTGGTTGAGTGCCGCGGTAATGATTACCGCGTTGGCCAATTACCGTGGA AAAATTACGCGCGCATTTACCGCGGTCGTTGAGTACCGCGGTAGCAGTTA CCGAGGGACTCGATTACCGAACAAAAAATCCATGGATTACCGCGTTCCGC GGTAAAAGTTAACTACATAAAAAGTCGTTACCGAGAGGACCCCTGAGAAA AATCTTCAAGAGGGGAAAAATGTGCATCTGAGATGGACAATATGGTATAT ACTGAAAAAAGACAACAGCTGGGACACAGCAACACCACCTGGATGCACGT TCCCAGCTCTGTCGGCTACTGGAAAACGGCCGAGCGACCCTTCTACTTTC CAGACCAATCGATCCAGCCCATCGCGGACCTTTGTCGCGGCCTCTGCGTG TATTTAGTTCGTGCTGTGGGGATGTGCTGCTGCACTTCGCAACCGGACAT GCACTGTAGAAAGCGGCGAGATTGACTTGTGTTCTGCTCAGGACTGTCTA CTCTGTGCGAAAGGAACCTTTCTGCTCGATGAAAAAAAAAAGGCAGGCTA CTCGGCCAGCCTCCTGTGAAGAGCCCAGTACCGCAAGGGTTAATATTTTG ACTGCTGTTCCTTCGATTATCTACATACAGCAGTACCAGACCTGCACTGG TGGGAGTGACCGCGAGTAAAATATCATATGAATATTGTACTATGTGTAAA TGCCACATTGAATGACCGTAGATTGTGAAGGCATCAAAGGCTCGCCGGAG ATCCCGACGGGGTGTTCCTCCAGGTCGGAGCCAACCCCGTTCCTTGGGCT CTCGAGACGTTCACGGAACGTTCCTCCTCCACAGGACAGCTGTCTTCCAA AGGACAACTGCGTTGATGACTCTCACTCTCTCGTTTCCCCTCCCTCTCGT CGTCGAGAGAGAGTAACTCGGTGCGACTCCGCACCACACATTACGTTAAC CTACCTGACAGAACCTGAGAGCTGAAGGCTCTTATATATTTTATCATACA TATGATACTGGTATCATACAATATCATACACCGTACATATGTATCATATC ATACCATGACTCCAACCGAGCCGGCAGGGCGAAATATCCTCACCACAGAA CCACTTTTTCAACTCCGGAATTACGGTAGTACACACAGTAGCGCTATAGT TCGTGAGTATGATGAACGAATACCGTGGACGGCATATCACATAATACCAG GTATGTGCAACGCATAAGTCCGTCTATAATATGATGCCATACGGCGGCAG TGTATACGACCACCACAAACCGGAGCCCTCTTCCGTGTGTTCGTGTGTAA ATCTTTGATGATTTCCTTTATCATTTGACATAGCGACAGGCGGGATCCCC CCCCCCCCATCCCCCCCCCGCCCCATCACTCTCGAAGCACTGCTGAATGT AGGGGGCCCGGCCACACTGCGACCCTGCTGCGGTTCCTTCTCTTGCAGCG GTCGCGATAATATCCAAACAAATAAACGCAGCCAATGCCTACTGCTGTCA ATCAGCCCAGACGCAAAAAGTTCTTCCAAGTACGAAGTATTTTTTTAACC TCCGGCAAGCTCCCTTGCACTTCGCATTTTCTGTATGGTATCGCTCACCA CTGCTGTCTTCGCCGGCTCGCTGCGCTCGCTTTTCGAACTTGCCTACTGT AAAGTAAAGCTATTGTTGGATGAACCTGGTACCTATCATCGCCAGAAATC GAGGCCGACATCGATCCTCAAGTATCGGTATCAGGATCGATCCGCGAATC GGTGTCAGTATCGGACGTTTTCTCGAGTATCGAAAAATGATCGAGTATCG CGTTTTTTTCCTCGATCCAAAAAGATCGTCTCACATGATATGAGACTGTT TTCGGGCTCGATCTCCAACACTGACCCAAACCCAAAAAACAAATGTTGAA CGAGTGTCCGTAAACTTGAAACACAGTTACTTTGATACCTTTGTATCATA CCACTTCGACTTCGGTGTTTGTATGAAATGGGATGCAAATACAGACTCTA TGCTAGCGTTAAAAATAGCCAATCAAGGTCCTCTGGAAACCGACCCTACC TGTAAAACCGAACCTGTTTTGTGTCGCACGGGACAGGGCGCGTTTCCCGT TCTCTCTGACGAATGGTGCAAGATGGCGACTGCTCTCGGCAGGATAGCTG ACATATCGGAGGCGGAGGTGGGCGGAACTACACAACTGTAACGAATCAAG CATGACGCGCAACCCCTGCAGAACAAGGGTTTACGCTCGCCCCTCCCTGC TGCTTCTTTGGTTAACTCTTTCGGAAGTTGTTTCATTTCCCACATATCCT ATTCAAATGTGCCACTCAAACATTTGTGGACGAATTCCCCCTCTCCACCA AGTTCCTAGTCTTGCTGCGCTGCTGTCTGTAAACTGCGGCGACTCAAAAT ACTTGGAACTCGATCGAATGCAACCAGAGGGGGAGTACCGCGATCCGGGG ATGGTGCTGGCACTGAAAAACCCCATTTGCGTCATACTTCGAAGTACATG GTGTATCATATCCCAACCATATTTTTTCCCTGGGGTATACTGCATATATA TAACCAGCAGTGATTCCCATGTTCCTTTTGCCATACTCTCCACGGGTTCA TGAATTCACGACAGGCGAAACTAACTCAAGACTGCGTTGGGGGGGCCCGG ACGGGGGGCATGAAGACGCTGTGGGAGGGCGAGGCGAGTTTTTCTGTCCT TTTGCAGGTCGTAAAAAATTTGTGCGCGTAAAAAGAGTGTGCCCTTGACC GCCGTGTTCCCAGTACATTTCACCAAGAAGCAGCAACAAAGTTTAGCCTT CGGCTGTGTGCGTGCGAGATGGAGAATGCACTGGCCAGCAAATGACGATG AAGGTACGGTGAGCCGGCCACCGGCAACTCTCTTGCGGACACCGTCGTCG CCCTGCTCGGCGTACATTCACAAAATAGGATATCCTCTTCGCCAGTACTG TAGAAGTACAGAGAACGGTAGTGTACATGCTTTCGTCCCGGGACTTTTGA CAGCACACACATACAACAAGAATACGCCGATCTGTTGCATCTCCTCCCTT CTCACGCAGGAGATGGCCTTGCGCTACATCCTGGAGGACGGCAAGCTCAA CGTTTGTTTGCGAAACCTGGAAGAATGGCGGAAGCTCCATCGGCAGCGGT GCAATGACGGTGCCGACCACGCGGATGAGGAGCCGTCGGTGAGTGAGCGC GTGCGTGAGGGAGTGAGTCAATGAAGAGGTGAGCGGGTGCGTGAGCGAGT GAGAGAGTGAGTGAGTGCGCAAAGCCTCCTTTTTTTGTGCAAACTTTCGT TGACTTTTCTCTTGCGGGACGACCATCCCGGAGGTAACGAGCGGTGTTCC TGCCACCCAAGTCGGGGGAGGAAAGCGCTGCTGGTTTGTTGCGAGTTCGT CTGTAGATACAAGCTTGAGAGGGATTGAATTTGCATGCTAGTTCCCGGTC CGAAAATTCGAAACTTCCGAATTCGAGGCACGCACACCGAACACGGCGGG AGGGTTGGGTGGGGGGCTCCCGGAAGCGGGTATTTTCGCCGTGACCTCGG ATACGACTTGCGTTCATTCAAGAAGGCGAGACCGTAGAGCAAGGTAGATA TTATGTTCGAGAACAAGGGTGGAAGAGCATGACGTTAGTGTCATGGGTAC GTGTTGAATTCGGTTCGGGAAAGTTTTATTCGCCGTTGTTGCCGCTCCTT CAAACACGCCGTATATAGTGAGCCGTCCACGGTCGATGTGTTGACGTCTC CTTGTCCATCGTTCTCTCTTTGTATGTTTTCCCACCAGCGAACAATCATC GGCGCAGTCGTCGCAAGTGCTGGAGACGATAGATTCGATGATACCATAGT TTTGTTGTTGTTGTTGTTGTTGTTGTTGAGGATCGAACGGTACTCGCGGT CGCTCAATCCCCCCCTCGGATGTAAGAAGGTTGTCGAAAGCTTGGACGCT TTCGAGAAGGGAATGGGCACCATCCTCCGGAACGCGTGGACTCACATCGA GGCTCTCCAGACCACTGACATCCCCTTGCTCGTGGAGTACGTGACAGGGG TGAGGGCGAGAGTACTGACAAGGGAGGGTGACAGAGGGAGGGAGAGCCGG AGAGAAGAACAAAAAGAAAGAGAGATGGAGAGAGAGATAGAGAGGTTGGA AGTACCGGTAGTCGCACTATGACTGGAAGCGAAAATGAAGCAAAGCAGAC AAGAAGCAGTGGGGGGGGACTTGTGATGGGGAACATGGGATGTTGAAAGG TAGCAGAAACATTGGGGCACATCCCACAACATAAGCGAGGTCAACAAATC GGCGCTGGCGTAGTCGTATTATTGCGGCGGAATATTTGTGATTTCAACAC CACCCTTTGTGCCTCGAACCAAGAAACATTCCGTGGCTGCCCGCAGGTGT TGAAAGACGCAGCTGAAAATCCTGGGGTCGTGAAGGACATGAGTCAGAGA GGAGACTTGGCTGGACGTCAGGAGGTGGGTGTGTGTGCCCCACGGGGATG TAACCGCGGTCTGCAAGCGACGGCCAGTCGGCATCGTGTTGCCCTTGCAC CCAACGGATGGAAAGATTGCTGTACCGAGCCCCCCTCCTGCGGCCTCTAT GATCCGTACCCCGTGTCGTACATGTGTGTCTGCCTCCCCAACCACTCACT CGCAGCGTGCCCACTTGTAACTAGTCGATGTAGATAGGGACGTCTGCCTT CAAGTTTTTCGCGTTTCGCCTGCCCTCTTTATTGCATGCCTTCTTCGCGA AAAAACACGTACTTTGAAGTACCAGTGAGGAGTCTTTATGTTTGCTTCAG CGACGTGAGAAAGGTTTTACCAGTAACTTATCTTTAGGTTTGCTTTTGCC ACCGCTTCCCAAAAGGTGAAGTTCCTTTTGCCTTGGAGCACTTGCCGTGT CTATGATAACTCCGTTGTTTTTGGCGCTTTCCAAACATTTTCAAACCGTG TTGCAAAAGGTCGTGTGCCTCAGCTACTTGAGAGGGCTACTGTCGTGCCT GACCGAGCACGAGGAGGGGCGAGTTATGCCGCACCTGAGGTCGGCCGGCA CCGCCTCGTGCCTCGCGACGATGCTACAAACCAACCACCGGCACCTAGGG GTGGAGGCATCAACGGTGGGAGCGGAGGCTCTCGCACATATTTGCGGAAC TGAGGACTTCATTACGTATCGGGTGAGGACGCAGGGGGGGGGGTAAACCA CGGTACAGCTCAGTGGGGAGAGGGCGGGCTTTAATTGGGCATCGGAAGCA TCGGGGAGGATAGCCCCTTGCACTTTTCTTCCTTCAGCCGCCATCGTAGA AGACATTCCCCCGAGTAGTTTCCCGGTTTGTGTAGGCTTTCTTTCCTGCT GTTTTTTTCCTCCTGGCACGATTTTGCGTCTGGTTCACAACCACGGCCTT GTTTGAGAATCGACAACAACAAAAACAACATCAATACCAACAACAAGTCC ACAGACGTTCAAACGTAAGAAACGGCGTTTATGATACTGTGTGAGATTAT TTGGGCGACGAAAGGGAGATCAAGGCATTGCGCCATTCACCAGGATAAGG GCGATTTGGATATATGCCATGCGGCCGACGTTCGTTGCTTTCTTGTGCGA TATATCGGGCTTGACCGCTAGCGGTCTTTGTGACTGCCTGCGGGTAATTC CCAGGGGTAGGGTCTTGGTCATTCGCCCTGCCGACAGAGGATTCCCTTGA GGGCAGCGCGTCGAAGCCTCCCCTCTACACGAACGACCTCCTTCAAAAGA ACTTCTACTCTACCATGTGGATGAAAGTGCGTTGAAACTTTTATCAGTAC CCTTCGTAGTTTTTGTTTGTTCTGCTGCATTTGTGACGTTAGTTGCAGTT GCACAGCTCTGCAAGAGTATTTTCCACGAAATACGAACGCGCCCGGTGCC CGGCTGTCGTGGGCTTTCATTCGCTTCGGACGGCGGTGGTGTGGACGAAA AGGGACGAGGCGCGACCGCACGGCACATCGTGTTGTCGGGTCACTCGAGA GCTTCATGGAGCATTCTACACGAATCACACTTACTTTCAGGAGGATAGGG CTGTTCCATGGCAATCACTACGCGTACAGCCACCGTCTCCGATGTAGTGT ATGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGAGGATTACAA GCAATCACCCTTTTTCTTTCTTCCTCAACCTCTCATTGTTTTGTCGAAAT CACGTACCTGTGATACTGCTTTTTCCTTTCCACAAACAAATAAATGTCCA TCACGCACTGCACGGCGGCGTTTATTTTTGTCCGTGTCGTTGCGCCCTCA GGAAGCTTACATCGACAACGAAGAAGCGACGGCAGCGTTTGCGAGCCTCA AAGAAGATCTCGTCGCTGATCTGTGCGAAGACCCCGAAGAACGGAAAAAG TTAAGGTGTGACGACCACCCTTGAATCAAGCTCTGGCGGTGCGGGGCGGG AGAGGCGGTTCCTGCCGTCATCAATGCTGCTACTTATAGCTCATCGGTTG GTTTTGTTGGTGCGCTCGCACCTATCGTACCGATAGACGGCGGTGGTCCG ATGAGAAGGGCGTTCGTCGCATCTGATTGATTCTGTGCGGTTCTTGGGGG TTCGTTTCGTGCATGGAATATCATAAAGTGAAAAAATCCAAAGCTCGACT CTCCATTTGGAGGACAGCGAACTTACCACGCTCCGTTATTCCGGAAACTG AAACAGTTAACAACGGAGTGCAGATATCTTGGTTTTAACAATAACAGAAG AAGGGAAAACACTCTCCTCGGAGTATAACATGGATGGGTGAACACTGCGA CATGAAATTTGTGTCGGTCCTCACGTAACGAGGGATTGTTGGATTGATTT TTGGACAATCGGGGCTATGATAGTGAGAAAGTGTGCCCTCCTCCTGCTCC CCCTCCTCGCCCCTATCCTGGCACAAAGCCCGAGAATATAAACACCCACG GGCAGGCATGGATCGACATCTTTTATTCGTTTCGTAAATATTTTGGAAAA TATTCTCAAACACAGACATGCATCACGCTACAATCAGTCGCGTCATGAGC GACAAATACGCACATATCATGCACTTGTGTGATAAGTCGTAGGTGTCATT TTTGTTGATCCGTTAGAATATTGCTTGCCGGTTTCTCTTCGAACACTCCT CGTGCGCTTTCTGTGCGACCTCGGCGCACAAAACCCCTGCAGGCCCCTGC TAGACGCAATTTCCTACTGCGAACGCAACAGCGGGAGAAAGTGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1018:36362..46405+

>mRNA_P-littoralis_Contig1018.7.2 ID=mRNA_P-littoralis_Contig1018.7.2|Name=mRNA_P-littoralis_Contig1018.7.2|organism=Pylaiella littoralis U1_48|type=CDS|length=963bp|location=Sequence derived from alignment at P-littoralis_Contig1018:36362..46405+ (Pylaiella littoralis U1_48)
ATGTCGAGGCGTCCTAATGCGTATCAATCGAATAGCCCGGAGGGTGGCAT
GGATGCCCTGTCAGACAAGCTTAGCGCCGATCTTCGCGGGAGCATTCGAG
CACTGGGCGCGTTTCCCGTTCTCTCTGACGAATGGTGCAAGATGGCGACT
GCTCTCGGCAGGATAGCTGACATATCGGAGGCGGAGGCGAAACTAACTCA
AGACTGCGTTGGGGGGGCCCGGACGGGGGGCATGAAGACGCTGTGGGAGG
GCGAGGCGAGTTTTTCTGAGATGGCCTTGCGCTACATCCTGGAGGACGGC
AAGCTCAACGTTTGTTTGCGAAACCTGGAAGAATGGCGGAAGCTCCATCG
GCAGCGGTGCAATGACGGTGCCGACCACGCGGATGAGGAGCCGTCGGTTG
TCGAAAGCTTGGACGCTTTCGAGAAGGGAATGGGCACCATCCTCCGGAAC
GCGTGGACTCACATCGAGGCTCTCCAGACCACTGACATCCCCTTGCTCGT
GGAGTACGTGACAGGGGTGTTGAAAGACGCAGCTGAAAATCCTGGGGTCG
TGAAGGACATGAGTCAGAGAGGAGACTTGGCTGGACGTCAGGAGGTCGTG
TGCCTCAGCTACTTGAGAGGGCTACTGTCGTGCCTGACCGAGCACGAGGA
GGGGCGAGTTATGCCGCACCTGAGGTCGGCCGGCACCGCCTCGTGCCTCG
CGACGATGCTACAAACCAACCACCGGCACCTAGGGGTGGAGGCATCAACG
GTGGGAGCGGAGGCTCTCGCACATATTTGCGGAACTGAGGACTTCATTAC
GTATCGGGAAGCTTACATCGACAACGAAGAAGCGACGGCAGCGTTTGCGA
GCCTCAAAGAAGATCTCGTCGCTGATCTGTGCGAAGACCCCGAAGAACGG
AAAAAGTTAAGGCCCCTGCTAGACGCAATTTCCTACTGCGAACGCAACAG
CGGGAGAAAGTGA
back to top