mRNA_P-littoralis_Contig150.34.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5JFH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFH8_9PHAE) HSP 1 Score: 200 bits (508), Expect = 5.050e-61 Identity = 95/141 (67.38%), Postives = 113/141 (80.14%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLYKDSDNKFWTYYKFEYGKNKDGYWAG 423
ELP+ LR+RVTSK+ Y DG++ FCYQDECIYR+ND +R +WVPPN H LKKKGD GIMISGTIVDN GF+ D+ DI KAQ LRRK CD S ++AAG T +P+ YR+IDKLYKD D KFWTYY+FEYGK++DGYW G
Sbjct: 152 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDGQRFAWVPPNYHALKKKGDGQGIMISGTIVDNVGFVASDQADIDKAQALRRKWCDTSATEHAAGDPT-KPETYRNIDKLYKDEDGKFWTYYRFEYGKSRDGYWTG 291
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 200 bits (509), Expect = 1.590e-57 Identity = 95/141 (67.38%), Postives = 112/141 (79.43%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLYKDSDNKFWTYYKFEYGKNKDGYWAG 423
ELP+ LR+RVTSK+ Y DG++ FCYQDECIYR+ND +R +WVPPN H LKKKGD GIMISGTIVDN GF+ GD+ DI +A LRRKRCD S ++AAG T +P++YR ID LYKD D KFWTY+KFEYGK KDGYW G
Sbjct: 514 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDGQRYAWVPPNFHALKKKGDGQGIMISGTIVDNVGFVAGDQADIDEAHALRRKRCDTSAAKHAAGDPT-KPERYRKIDMLYKDDDGKFWTYFKFEYGKGKDGYWTG 653
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5KNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH0_9PHAE) HSP 1 Score: 194 bits (493), Expect = 1.110e-56 Identity = 92/141 (65.25%), Postives = 111/141 (78.72%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLYKDSDNKFWTYYKFEYGKNKDGYWAG 423
E P LR+RVTSK+ Y DG++ FCYQDEC YR+ND +R +WVPPN + LKK+GD GIMISGTIVDN GF+ GD+ DI KAQ LRRKRCD ++AAG T +P+ YR+IDKLYKD D KFWTYY+FEYGK++DGYW G
Sbjct: 205 EFPLHLRERVTSKKTYSDGRRAIFCYQDECTYRANDGQRFAWVPPNYYALKKQGDGQGIMISGTIVDNVGFVAGDQADIDKAQTLRRKRCDTWAPEHAAGDPT-KPETYRNIDKLYKDEDGKFWTYYRFEYGKSRDGYWTG 344
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5KPN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN2_9PHAE) HSP 1 Score: 173 bits (438), Expect = 2.400e-51 Identity = 84/130 (64.62%), Postives = 102/130 (78.46%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLYKDSDNKFWTYYKFE 390
ELP+ L +RVTSK+ Y +G++ FCYQDECIYR+ND +R +WVPPN H LKKKGD GIMISGTIVDN GF+ G + DI +AQ LRRK CD S ++AAG T +P+ YR+IDKLYKD D KFWTYY+FE
Sbjct: 146 ELPQHLCERVTSKKTYSNGRRAIFCYQDECIYRANDGQRSAWVPPNYHALKKKGDGQGIMISGTIVDNVGFVAGGQADIDEAQALRRKWCDTSATEHAAGDPT-KPETYRNIDKLYKDEDGKFWTYYRFE 274
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.510e-50 Identity = 88/138 (63.77%), Postives = 108/138 (78.26%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLY---KDSDNKFWTYYKFEYGKNKDGYWA 420
LR RVTSK+ Y DG++ FCYQDECIYR++D E K+W PP +HGLKKKG+ GIMISGTIV + GF+ G +DDI KAQ+LRR+RC +SE ++AAG T RP+KYRDI+ LY + D KF TYYKFEYGKNK+GYW
Sbjct: 252 LRARVTSKKKYADGRRAIFCYQDECIYRAHDGESKAWWPPMMHGLKKKGEGQGIMISGTIVGDVGFVEGTQDDIDKAQDLRRERCRISEEKHAAGDHT-RPEKYRDINMLYFEGEGDDRKFSTYYKFEYGKNKEGYWT 388
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE) HSP 1 Score: 177 bits (450), Expect = 9.110e-50 Identity = 89/139 (64.03%), Postives = 109/139 (78.42%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLY---KDSDNKFWTYYKFEYGKNKDGYWAG 423
LR RVTSK+ Y DG++ FCYQDECIYR++D E K+W PP +HGLKKKG+ GIMISGTIV + GF+ G +DDI KAQ+LRR+RC +SE ++AAG T RP+KYRDI+ LY + D KF TYYKFEYGKNK+GYW G
Sbjct: 268 LRARVTSKKKYADGRRAIFCYQDECIYRAHDGESKAWWPPMMHGLKKKGEGQGIMISGTIVGDVGFVEGTQDDIDKAQDLRRERCRISEEKHAAGDHT-RPEKYRDINMLYFEGEGDDRKFSTYYKFEYGKNKEGYWTG 405
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5JJP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP5_9PHAE) HSP 1 Score: 145 bits (367), Expect = 6.100e-39 Identity = 85/194 (43.81%), Postives = 107/194 (55.15%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKA---------------------------------------------------QELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLY---KDSDNKFWTYYKFEYGKNKDGYWA 420
EL LR RVTSK+ Y DG+K FC+QDECIYR+ND ER +W PP HGL+KKG+ GIMISGTIV + GF+ G +++I K Q+LRR+RC +S+ ++AAG T RP+KYRDI+ LY + D F TYYKFEYGKNK+GYW
Sbjct: 117 ELHPNLRARVTSKKEYADGRKAIFCHQDECIYRANDGERMAWWPPTTHGLRKKGEGQGIMISGTIVGDVGFVEGTQEEIDKVIRPGLKSTATSTCSTSRARATIATSRRTTSSSTARTRRATXEGTQEEIDKVQDLRRERCRISKEKHAAGDQT-RPEKYRDINMLYFEGEGDDRNFSTYYKFEYGKNKEGYWT 309
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5JX52_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX52_9PHAE) HSP 1 Score: 145 bits (366), Expect = 1.170e-37 Identity = 70/141 (49.65%), Postives = 97/141 (68.79%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLYKDSDNKFWTYYKFEYGKNKDGYWAG 423
+LPK+L++RVTSK Y DGK CYQDE I+R+ND ++ +W P+VH ++KK GIM+SGTI+ N GF+ + +IK A++LRRKRC+ S G + + YR IDKLY D + +W+Y+ FEYGKNK+GYW G
Sbjct: 517 DLPKSLQERVTSKLRYEDGKMALLCYQDESIFRANDDQKAAWWAPDVHVVRKKSPGQGIMVSGTIIHNVGFVSATKREIKSAEQLRRKRCNASAAAAKRGENV-KVEVYRRIDKLYVDEEGNYWSYHLFEYGKNKEGYWTG 656
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5JXQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ2_9PHAE) HSP 1 Score: 140 bits (352), Expect = 9.190e-37 Identity = 66/99 (66.67%), Postives = 78/99 (78.79%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAA 297
ELP+ LR+RVTSK+ Y DG++ FCYQDECIYR+ND +R +WVPPN H LKKKGD GIM SGTIVDN GF+ GD+ DI KAQ RRKRCD S ++AA
Sbjct: 177 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDDQRFAWVPPNYHALKKKGDGQGIMTSGTIVDNVGFVAGDQADIDKAQAFRRKRCDTSATEHAA 275
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Match: A0A6H5JC29_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC29_9PHAE) HSP 1 Score: 134 bits (338), Expect = 4.990e-35 Identity = 66/114 (57.89%), Postives = 84/114 (73.68%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLKKKGDETGIMISGTIVDNEGFIIGDEDDIKKAQELRRKRCDLSEHQYAAGFTTNRPKKYRDIDKLYKDS 357
LR RVTSK+ YP+GK+ FC+QDEC+YR ND +R SWVPPN +GLKKKG+ GIMISGTIVDN GF+ G++ DI KAQELRR+RC + A P+KYRD L++++
Sbjct: 167 LRKRVTSKKAYPEGKRAIFCFQDECMYRGNDDQRCSWVPPNFNGLKKKGEGAGIMISGTIVDNVGFVAGNQSDIDKAQELRRQRC----RKAAVAEGVAEPEKYRDNSMLHEEA 276 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig150.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig150.34.1 >prot_P-littoralis_Contig150.34.1 ID=prot_P-littoralis_Contig150.34.1|Name=mRNA_P-littoralis_Contig150.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=141bp ELPKTLRDRVTSKRLYPDGKKVKFCYQDECIYRSNDSERKSWVPPNVHGLback to top mRNA from alignment at P-littoralis_Contig150:122320..122744+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig150.34.1 ID=mRNA_P-littoralis_Contig150.34.1|Name=mRNA_P-littoralis_Contig150.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=425bp|location=Sequence derived from alignment at P-littoralis_Contig150:122320..122744+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig150:122320..122744+ >mRNA_P-littoralis_Contig150.34.1 ID=mRNA_P-littoralis_Contig150.34.1|Name=mRNA_P-littoralis_Contig150.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=423bp|location=Sequence derived from alignment at P-littoralis_Contig150:122320..122744+ (Pylaiella littoralis U1_48)back to top |