prot_P-littoralis_Contig15.207.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.207.1
Unique Nameprot_P-littoralis_Contig15.207.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length877
Homology
BLAST of mRNA_P-littoralis_Contig15.207.1 vs. uniprot
Match: D8LL59_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL59_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 6.400e-153
Identity = 341/790 (43.16%), Postives = 445/790 (56.33%), Query Frame = 0
Query:  121 IMLLEAEIKSAKSHTVELQHHMAYLQTQLRGQAGDIASLYDKIKDLESKLASRPFVAKEASGASSAASISILAS---TTPLSTPASAASFGPLFPD---------QNRPVSCDPAESVVLRKGGLQSLCPKSSSASMTSGDATEAGSGESNAAPHKS-----TTAGPRVVPLRNKTAHTSAAADGSPRAINDTRVAPSDDDSCTEPPSASPAPAQQARNAKSSNKDGGDSDGGGFETEPDFDVDVSLTVATPKLPRNSLSDFWADT-SLTVDDSSPSRTTRNHRLRAASVGSARQTIGALSSPARQVSSDRISAYRATESEPSKEEAVPAHVGGKIVAHDGENEPA----TAVAEPAAETRTQAEVTPVLRRTTQEREGADHKSSHLMDCARCEETLPESESIARCERCPRSFCARCLERSLDDQGLNIEGLDRGCRALLRGEQGDLIIAQCPLCVRGGDKEFAPPPPGAAPMDHLLDELLRHDLSVCFREPVDIVKHPDYLETVGRNNMMDLGTMLGKLKSKRYPRRRGPGQFLDDLNRIWRNCRKFAGCDELGQPHYGTTVPGIVRCALTLEAMSIRFCAKHMSDL--SAAWQESTWDFHRQKQERENAEARLTSL-EKMADTALVEVAARATDGRGVGVTAAV--------------VQDGRGSTAVGLGSSNSATSRSSAEEESDRIGDRRCNGSSSATESCSTGVRKRKAAATEAAPTGESVHKIRTRAATRTVPGATTARVEDGSLATPSIAR-PAAKTQQXXXXXXPPWSPLDKLCDLATTFK 870
            ++LLEAEI +A+SH + L HH+A+L+TQ+ GQ G IA L++KI+ LE+ L S           + AA+I++ A+   + P +T   +A   P  P          Q+R    DP +     K  L  L P     + T+ ++   G G   AAP  +     T A P  +  +N+     +A +  PRA  + ++APS D     P   SP+ A  A     +   GG++DG                 A P  PR+SL DFWAD+ S  +D+S PS  TRN R +AA        +              ++      SEP +  AV   V     + +G++ P      A AE  +    QA + PVLR+ T+ REGA+ +SSHLMDCA C+ +LPE + I RCERCPRSFC++CLER L +QG+ +E L + CR+LL G+QGD+ IA+CP C RG D EFAPPPPG APMDHLL ELLRHDLS+CFREPVDIVKHPDY+E++GRN MMDLGTML KL+ KRYPRRRGPGQF +DLNRIWRNCR+FAGCDELG+PHYG TVPGIVRCALTLEAMS +F + +MSD   +AAWQESTWDFHRQ+QERENAEAR   L     D    E+   A  G  + + AAV              +Q+         G +++A S+ SA E    +G             C     K  A A E    G   H+   RAA+ ++    T+ +  G   TP + R PA K Q+      PPWSPLDKLCDLAT F+
Sbjct:    1 MILLEAEITNARSHNLHLHHHVAFLETQMSGQLGLIAVLHNKIRALEADLKS-----------AKAATIAVGATPNTSNPTATSCDSADACPPQPSNPVPAEELVQHRAARPDPEKEGTAGKYALCDLRPHDGYRA-TAAESDRHG-GSDVAAPVSAEVAQRTVAAPLTLSPQNEE---DSAVESFPRAA-EAKLAPSADP----PAPGSPSSALAAAAVHQAESVGGENDGS--------------IAAAPTTPRHSLRDFWADSGSNDIDNSPPSSNTRNKRHQAAQQEKQEAPLP-------------LALQDGKPSEPLQTAAVDTDV--TPASQEGKSSPTGNSGPAAAESLSPAEPQAVLLPVLRQITEGREGAEDRSSHLMDCASCQHSLPEGDPIGRCERCPRSFCSQCLERGLVEQGVELEALGQDCRSLLNGKQGDISIARCPECFRGKDNEFAPPPPGGAPMDHLLSELLRHDLSLCFREPVDIVKHPDYVESIGRNAMMDLGTMLSKLQGKRYPRRRGPGQFQEDLNRIWRNCRRFAGCDELGRPHYGNTVPGIVRCALTLEAMSDKFISSYMSDNQETAAWQESTWDFHRQRQERENAEARRKQLGHPDVDGGKEELKPLAPGGGDMRLVAAVQHNSSETDSEQKCNMQEKESLAGESAGRASTAASQQSANEIVASVG-------------CKRSASKLAAVAEE----GSVQHRRSRRAASISLESTATS-LGGGDPPTPRVTRRPAGKMQRHQ----PPWSPLDKLCDLATAFQ 718          
BLAST of mRNA_P-littoralis_Contig15.207.1 vs. uniprot
Match: D7G8L6_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L6_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 2.070e-31
Identity = 85/224 (37.95%), Postives = 116/224 (51.79%), Query Frame = 0
Query:  484 HLMDCARCEETLPESESIARCERCPRSFCARCLERSLDDQGLNIEGLDRGCRALLRGEQGDLIIAQCPLCV-RGGDKEFAPPPPGAAPMDHLLDELLRHDLSVCFREPVDIVKHPDYLETVGRNNMMDLGTMLGKL-KSKRYPRRRGPGQFLDDLNRIWRNCRKFAGCDELGQPHYGTTVPGIVRCALTLEAMSIRFCAKHMSDLSAAWQESTWDFHRQKQERE 705
            H   C+ CE+   E +++A+CE CPR  C +C  R         EG       + + +  D ++     C+ +  D EF  P  G  P  HLL  LLRHDLSV FREPVD+  +P YL  V R +MMDLGTM  +L K K+Y   RG  +F  DL +IW NC K+AG     +P       GIV C L L+ M  R+ A +M        E +W   R++++RE
Sbjct:   85 HCTFCSVCEKPRTEPKAVAKCEACPRILCRKCAGR---------EG-----ETVPKTKYADDVVLPLHKCLCQTKDSEFPEPKKGKDPQAHLLKHLLRHDLSVMFREPVDVETNPGYLGVVTREDMMDLGTMKRRLLKKKQYQSPRGQQKFRTDLEKIWVNCWKYAGY----KPGSSDDRAGIVMCTLILKTMIERYYADYMEQQELVVDERSWQAGRERRKRE 290          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL59_ECTSI6.400e-15343.16Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
D7G8L6_ECTSI2.070e-3137.95Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 697..724
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 839..855
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 751..860
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..343
NoneNo IPR availableCDDcd04369Bromodomaincoord: 571..646
e-value: 2.29773E-15
score: 70.479
IPR001487BromodomainSMARTSM00297bromo_6coord: 560..684
e-value: 8.1E-8
score: 42.0
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 572..648
e-value: 1.2E-11
score: 44.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 579..654
score: 9.2558
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 568..711
e-value: 9.7E-18
score: 66.1
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 571..686

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:738356..743074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.207.1mRNA_P-littoralis_Contig15.207.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 736656..743882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.207.1 ID=prot_P-littoralis_Contig15.207.1|Name=mRNA_P-littoralis_Contig15.207.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=877bp
MASNVPPGVSAAWSGGSAPWGKRYIQVSPAAQFGGADLTLAHTSRDRTES
VTNVDSVPPHNAAAAAAAAAVIRSRHLQQAYLPPFPYLLNTHGELGAPNE
TNAQGSVAGNKHDQHGGAMHIMLLEAEIKSAKSHTVELQHHMAYLQTQLR
GQAGDIASLYDKIKDLESKLASRPFVAKEASGASSAASISILASTTPLST
PASAASFGPLFPDQNRPVSCDPAESVVLRKGGLQSLCPKSSSASMTSGDA
TEAGSGESNAAPHKSTTAGPRVVPLRNKTAHTSAAADGSPRAINDTRVAP
SDDDSCTEPPSASPAPAQQARNAKSSNKDGGDSDGGGFETEPDFDVDVSL
TVATPKLPRNSLSDFWADTSLTVDDSSPSRTTRNHRLRAASVGSARQTIG
ALSSPARQVSSDRISAYRATESEPSKEEAVPAHVGGKIVAHDGENEPATA
VAEPAAETRTQAEVTPVLRRTTQEREGADHKSSHLMDCARCEETLPESES
IARCERCPRSFCARCLERSLDDQGLNIEGLDRGCRALLRGEQGDLIIAQC
PLCVRGGDKEFAPPPPGAAPMDHLLDELLRHDLSVCFREPVDIVKHPDYL
ETVGRNNMMDLGTMLGKLKSKRYPRRRGPGQFLDDLNRIWRNCRKFAGCD
ELGQPHYGTTVPGIVRCALTLEAMSIRFCAKHMSDLSAAWQESTWDFHRQ
KQERENAEARLTSLEKMADTALVEVAARATDGRGVGVTAAVVQDGRGSTA
VGLGSSNSATSRSSAEEESDRIGDRRCNGSSSATESCSTGVRKRKAAATE
AAPTGESVHKIRTRAATRTVPGATTARVEDGSLATPSIARPAAKTQQQQE
EQQPPWSPLDKLCDLATTFKDGALTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf