mRNA_P-littoralis_Contig15.178.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: D8LL49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL49_ECTSI) HSP 1 Score: 449 bits (1156), Expect = 4.880e-152 Identity = 248/328 (75.61%), Postives = 267/328 (81.40%), Query Frame = 1
Query: 1 PHPQLADIMKAGTKFVVGSCVFITALHRAGAFVPPRGSIGKAHSPVL--SSTNKGKGVARRSSSYAGVT-SARVARCGWQVQ-QRHVLRAQMTDEEMALDQALIQRVAEEVEAESGVELEQLINPAKVINLERDLVKLKAALESGAGADQSAIEEEIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFPDVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTVGKPDGAGDASAKSQPKWLKFIFKSLDFGSGQERGVRGAARDRLKEGKE 972
PH QLA MK+ T V+GSC I AL A AFVPP G A S + SST+ +G +GV SAR R G Q + Q L AQMTDEEMALDQALIQRV +EVEAESGVEL+QLINPAKVINLERDLVKL+AALE G D+ AIEEEIAKKE+TLVKEKRMYMQGWLKKVF+GQAVITTILGGLMASD VP FP VDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATP+VSF MPFITK+PVPIYWANIAT+VACYGYGFTVGKPD ++KSQPKWLKFIFKSLDFGSGQERGVRGAARDRL E K+
Sbjct: 15 PH-QLAMKMKSRTSLVLGSCAAIAALRGADAFVPPTGGFATARSSAVHVSSTSSRRGC-------SGVERSARPRRTGRQQEGQGDALMAQMTDEEMALDQALIQRVTQEVEAESGVELDQLINPAKVINLERDLVKLRAALEDEPGTDREAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFITKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFKSLDFGSGQERGVRGAARDRLNEKKQ 334
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: A0A6H5JI21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI21_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 9.850e-134 Identity = 217/300 (72.33%), Postives = 242/300 (80.67%), Query Frame = 1
Query: 10 QLADIMKAGTKFVVGSCVFITALHRAGAFVPPRGSIGKAHSPVL--SSTNKGKGVARRSSSYAGVT-SARVARCGWQVQ-QRHVLRAQMTDEEMALDQALIQRVAEEVEAESGVELEQLINPAKVINLERDLVKLKAALESGAGADQSAIEEEIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFPDVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTVGKPDGAGDASAKSQPKWLKFIFK 897
+L + +++ + ++ TAL A AFVPP G + KA S + SST+ +G + G+ SAR G Q Q Q VL AQMTDEEMALDQALIQRV EEVEAESGVEL+QLINPAKVINLERDLVKL+AALE G G D+ AIEEEIAKKE+TLVKEKRMYMQGWLKKVF+GQAVITTILGGLMASD VP FP VDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATP+VSF MPF+TK+PVPIYWANIAT+VACYGYGFTVGKPD ++KSQPKWLKFIFK
Sbjct: 14 RLVPSLTRSAVYLLSTFIYTTALRGADAFVPPTGGLAKAPSSAVHVSSTSSRRGCSGVDVRVRGIERSARPRSTGRQQQGQGDVLMAQMTDEEMALDQALIQRVTEEVEAESGVELDQLINPAKVINLERDLVKLRAALEDGPGNDRKAIEEEIAKKESTLVKEKRMYMQGWLKKVFVGQAVITTILGGLMASDQVPFFPHVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPVVSFAMPFVTKEPVPIYWANIATLVACYGYGFTVGKPDDGEGGASKSQPKWLKFIFK 313
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: A0A835YV04_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV04_9STRA) HSP 1 Score: 256 bits (654), Expect = 1.270e-77 Identity = 132/222 (59.46%), Postives = 161/222 (72.52%), Query Frame = 1
Query: 274 EMALDQALIQRVAEEVEAESGVELEQLINPAKVINLERDLVKLKAALESGAGADQSAIEEEIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFPDVDISIQVLGFWFVWLFTVPSLRARKP-GASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTVGKPDGAGDASAKSQPKWLKFIFKSLDFGSGQERGVR 936
E A DQALI RVA EVE ESGV L+QLINP+KVINLERDLVKL+A LE+ G S + + I KEA L EKR MQ WLK++F+GQA ++ I+ G M D VP F VD+SI+VLGFW +WLF +PSLRARKP +EK AL+IAF+A+P+VS +P ITKDPV IYWAN+A A Y YGF G G + QP+W++FIFK+LDFGSG+ERG R
Sbjct: 62 EAAADQALIARVAAEVERESGVALDQLINPSKVINLERDLVKLRATLETATGDSASELRKTIDGKEAKLATEKRAVMQDWLKQIFVGQAALSVIIAGAMVYDRVPGFEHVDLSIRVLGFWVIWLFAIPSLRARKPTNPAEKTALNIAFVASPLVSLALPAITKDPVSIYWANLAVCAASYVYGFASG---GQSEEDEAKQPQWVRFIFKALDFGSGRERGAR 280
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: A0A6S9FX91_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FX91_HETAK) HSP 1 Score: 237 bits (604), Expect = 3.510e-70 Identity = 124/231 (53.68%), Postives = 165/231 (71.43%), Query Frame = 1
Query: 250 LRAQMTDEEMALDQALI-QRVAEEVEAESGVELEQLINPAKVINLERDLVKLKAALESGAGADQSA-IEEEIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFPDVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTVGKPDGAGDASAKSQPKWLKFIFKSLDFGSGQERGVR 936
LRA T+E + ALI +R+ +EV SGVELEQL++PAKV+NLER++ +LK LE+ + ++A IEEEIA K+ EKRMY+QGWLK +F+GQ+V++ ++ G ++ VP DVDIS++VLGFWF+WLFT+PSLRARKP A EK AL+ AF TP+ + PF+TKDPV IYWAN+ ACYGYG + KP A A A + P W+K K+LD+GSG+ERG R
Sbjct: 54 LRAASTEELTPEEDALIIKRLEDEVMEISGVELEQLLSPAKVVNLEREIFQLKKELETTSNQARAAEIEEEIATKQTKANGEKRMYVQGWLKTLFVGQSVLSVVVAGFLSYGIVPFVEDVDISVRVLGFWFIWLFTIPSLRARKPAAGEKEALNWAFGLTPLTNLLAPFVTKDPVLIYWANLVVTAACYGYGLLLWKPSDA-PAEADTTPGWVKDALKALDYGSGRERGAR 283
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: A0A7S2UZ01_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ01_9STRA) HSP 1 Score: 224 bits (570), Expect = 5.340e-65 Identity = 119/224 (53.12%), Postives = 153/224 (68.30%), Query Frame = 1
Query: 286 DQALIQRVAEEVEAESGVELEQLINPAKVINLERDLVKLKAALESGAGADQSAIEE---EIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFPDVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTVGKPDGAGDASA----KSQPKWLKFIFKSLDFGSGQERGVR 936
D AL+ R+A+EVE +GVEL+QL+NP KV+NLERDL+KL LE D + IEE E+ +K L EKRM +QGWLK +F+GQAVI+T GLM D VP +D+S++VLGFW +WLFTVPSLRARKP A EK AL+IAF ATP+ + +PF TKDPV IYWAN+A + Y YGFT+G + P +LK ++LD+GSG+ERG+R
Sbjct: 75 DAALVARLAKEVEEANGVELDQLLNPGKVVNLERDLLKLSKELEIC--QDSTRIEEINKEMEQKTKKLNVEKRMVVQGWLKNLFVGQAVISTFAAGLMVYDAVPFVDHLDLSVRVLGFWVIWLFTVPSLRARKPAADEKTALNIAFGATPLTNLALPFFTKDPVTIYWANMAVLGLSYAYGFTLGSXXXXXXXXXXXXXSNLPDFLKAAIRALDYGSGRERGLR 296
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: W7TZ94_9STRA (Resistance to phytophthora 1 protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TZ94_9STRA) HSP 1 Score: 208 bits (530), Expect = 3.750e-59 Identity = 104/226 (46.02%), Postives = 149/226 (65.93%), Query Frame = 1
Query: 286 DQALIQRVAEEVEAESGVELEQLINPAKVINLERDLVKLK---AALESGAGADQSAIEEEIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFPDVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTV------GKPDGAGDASAKSQPKWLKFIFKSLDFGSGQERGVR 936
D ++QR+ E+V E+GV+L+QL+NP+KV+NLE +L+ L+ AA G G + +E +I KKE L EKR+ M+GWLK +F+GQ+++ +L G++A D +P F + + I+ FW W+FT+PSLRAR+PGA EK ALD+AFL TP+VS GMPF+T+D I+WAN YGY F G+ + G ++ P LK K+LD+GSG+ERGVR
Sbjct: 70 DDPMVQRIREDVRRETGVDLDQLLNPSKVVNLEFELINLRNERAAATQGGGKALAKLEAQIEKKETQLATEKRLVMRGWLKNLFLGQSLLAVVLSGVVAYDALPGFEHLPLPIRAFAFWSFWMFTIPSLRARRPGAVEKKALDVAFLLTPVVSLGMPFLTQDVPTIWWANAVATGVSYGYAFAFQGKGERGEGEDGGSEEDETLPGPLKAALKALDWGSGRERGVR 295
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: A0A6S8YSX9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8YSX9_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.030e-56 Identity = 113/257 (43.97%), Postives = 153/257 (59.53%), Query Frame = 1
Query: 256 AQMTDEEMALDQALIQRVAEEVEAESGVELEQLINPAKVINLERDLVKLKAAL---------------------ESGAGADQSAIEEEIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFP---------DVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTVGKPDGAGDASAKSQPKWLKFIFKSLDFGSGQERGVR 936
A M +E+ D ++R+ E+++ ESGV+L+QL+NPAKV+NLERDLV L++ L G G D + ++I+KKE L+ E+R +GWLK +F+GQA+++ L +M +D LF +DISIQVLGFW LF VPSLR+R+P EK ALDIAFLATP+VS P TKD I+ AN A Y + + DG + +K P+WLKFI+KSLDFGSG+ERG R
Sbjct: 72 APMMADELTADDPFVRRINEQIQEESGVDLDQLLNPAKVVNLERDLVNLRSQLADLTGITGIDNFIGITTEEIDNGGGGEDADKLRKKISKKEKDLLIERRSVFRGWLKNIFLGQAILSLGLSWIMVTDPSILFGGFDWFNNTNSIDISIQVLGFWXXXLFIVPSLRSRRPKGFEKKALDIAFLATPLVSLLAPVATKDTAEIWIANFAVTAGAYAFAYLTFDKDGDNNDGSKD-PEWLKFIYKSLDFGSGRERGAR 327
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: R1EB73_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EB73_EMIHU) HSP 1 Score: 196 bits (499), Expect = 1.980e-55 Identity = 105/216 (48.61%), Postives = 149/216 (68.98%), Query Frame = 1
Query: 316 EVEAESGVELEQLINPAKVINLERDLVKLKAALESGA-GADQSAIEEEIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFPDVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTVGKPDGAGDASAKSQP-KWLKFIFKSLDFGSGQERGVRGAARDRL 957
EV A +GV LE L+NP+KV+NLER+ + +A L + A GA+++ ++E++ K E L EKR +GWLK +FIGQ+++ + GLM D +P +D+S++ LGFW WLF +PSLRAR+P EK AL++AFL +P+++ GMPF+TK+P I+ AN+A ++ CY YG G DG G+ + S P +WL DFGSGQERGVRGAAR+RL
Sbjct: 4 EVRALTGVALEDLLNPSKVVNLERERILTEAELGAAADGAERAELQEKLDKIETRLAAEKRTVFRGWLKNLFIGQSLLAIAISGLMVYDAIPGV-QLDLSLRALGFWSYWLFVIPSLRARRPRGWEKRALNLAFLGSPLLTLGMPFLTKEPSLIWCANLALLLGCYAYGLAAG--DGDGEVDSFSGPLRWL-------DFGSGQERGVRGAARERL 209
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: A0A7S1GGE3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GGE3_CYCTE) HSP 1 Score: 194 bits (492), Expect = 3.380e-54 Identity = 111/252 (44.05%), Postives = 155/252 (61.51%), Query Frame = 1
Query: 268 DEEMALDQALIQRVAEEVEAESGVELEQLINPAKVINLERDLVKLKAALES------------------GAGADQSA--IEEEIAKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFP--------DVDISIQVLGFWFVWLFTVPSLRARKPGASEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGF-TVGKPDGAGDASAKSQPKWLKFIFKSLDFGSGQERGVR 936
D E+ D ++ + ++AE GV L++L+NPAKV+NLERDL L+ L + G G ++A I ++IAKKE + E+R +GWLK VF+ QAV++ +L +MAS+ LF ++D+SI+VLGFW LF VPSLR+R+P +EK ALDIAFL TP++S P +TKD I+ AN+ V A Y + F T G+ D D S +QP+WLKFI+KSLDFG+G+ERG R
Sbjct: 1 DVELTSDDPFVKSIDASIQAEVGVSLDELLNPAKVVNLERDLFNLRTELATLTGKVDLDIAGLPTDECDGGGGGEAADEIRQKIAKKEKDVALERRSVFRGWLKNVFLAQAVLSFVLSWIMASNPAQLFGGFDWFYSYNMDVSIKVLGFWXXXLFVVPSLRSRRPKGAEKKALDIAFLGTPLISIVAPALTKDTELIWGANLLVVAASYAFAFLTDGEDDD--DDSGSNQPEWLKFIYKSLDFGTGRERGAR 250
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Match: A0A7S2FLN3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLN3_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.960e-53 Identity = 101/219 (46.12%), Postives = 146/219 (66.67%), Query Frame = 1
Query: 337 VELEQLINPAKVINLERDLVKLKAALESGAGAD-QSAIEEEI----AKKEATLVKEKRMYMQGWLKKVFIGQAVITTILGGLMASDNVPLFPDVDISIQVLGFWFVWLFTVPSLRARKPGA------SEKVALDIAFLATPIVSFGMPFITKDPVPIYWANIATVVACYGYGFTVGKPDGAGDASAKSQPKWLKFIFKSLDFGSGQERGVRGAARDRLK 960
V L QL+NP+KV+NLE+D+ L+A+L A D SA+ EEI AKKE E R M+ WLK VF+GQ+V++ + GL++ D +P P++D++++VLGFW +WLFT+PSLR+RKPG +EK ALDIAFL TP+ + PF TK+P I+W N+ + ACY Y FTV + +G ++ S PK +KF+ +LDFG+G+ERG R+ ++
Sbjct: 87 VGLTQLLNPSKVVNLEKDIDALRASL---AAPDLDSAVREEIIDQIAKKEFKKSNEMRGVMRDWLKAVFVGQSVLSVAICGLVSYDALPFLPNLDLAVRVLGFWGIWLFTIPSLRSRKPGGVWGMSNAEKNALDIAFLVTPLANLLAPFATKNPPDIFWLNMVVLSACYAYSFTVSPQESSGASADASLPKPIKFVLTALDFGAGRERGAPAVVREEME 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.178.1 >prot_P-littoralis_Contig15.178.1 ID=prot_P-littoralis_Contig15.178.1|Name=mRNA_P-littoralis_Contig15.178.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp MKAGTKFVVGSCVFITALHRAGAFVPPRGSIGKAHSPVLSSTNKGKGVARback to top mRNA from alignment at P-littoralis_Contig15:644307..655575- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.178.1 ID=mRNA_P-littoralis_Contig15.178.1|Name=mRNA_P-littoralis_Contig15.178.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11269bp|location=Sequence derived from alignment at P-littoralis_Contig15:644307..655575- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:644307..655575- >mRNA_P-littoralis_Contig15.178.1 ID=mRNA_P-littoralis_Contig15.178.1|Name=mRNA_P-littoralis_Contig15.178.1|organism=Pylaiella littoralis U1_48|type=CDS|length=981bp|location=Sequence derived from alignment at P-littoralis_Contig15:644307..655575- (Pylaiella littoralis U1_48)back to top |