mRNA_P-littoralis_Contig15.48.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: D8LPD2_ECTSI (NCLDV-specific basal transcription factor A2L n=2 Tax=root TaxID=1 RepID=D8LPD2_ECTSI) HSP 1 Score: 447 bits (1151), Expect = 5.860e-156 Identity = 214/308 (69.48%), Postives = 250/308 (81.17%), Query Frame = 1
Query: 22 PPVTEDFHRLARRAKTNLEGARPDSKFLKKMNASFSDVSCTIDSFVDVRRPSTTAGASXXXXXXXXXXAEGQVEEESFHRADERDNHLSKEWICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKSTI 945
PPVT+ FHRL +R K ++ D+KFLKKMNASF V CTIDSFVD+ TT ++ + V++ N LSK WICE CN+ELVYIRKDAERVCPDCGLSHPYQEMTR+DC+RQGYV+HT YMYKRQNHFK WLKRTQG ETT VD+ V+D VR ELKKQR+ D+ T+SH KVREILKKLRLNKHYNNCVQIT++ITGV PPQMT+EQET+LL+MF+ IQEPF++IIR EPRQNMLSYSFLIHKFLE+MSWD+YLPYFPLLRSV+KI+YQDWIW KLCA+VGF+YI+ST+
Sbjct: 16 PPVTDGFHRLTKRVKRHMTSTNQDAKFLKKMNASFPGVVCTIDSFVDISAYRTTHHSNGEAERVV---TQSDVQDADMDAEVATGNGLSKAWICEVCNKELVYIRKDAERVCPDCGLSHPYQEMTREDCIRQGYVSHTTYMYKRQNHFKTWLKRTQGKETTTVDKGVVDSVRFELKKQRIDDIRTISHTKVREILKKLRLNKHYNNCVQITAIITGVTPPQMTNEQETALLQMFDAIQEPFQKIIRSEPRQNMLSYSFLIHKFLELMSWDEYLPYFPLLRSVDKIQYQDWIWRKLCAEVGFEYIRSTM 320
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: B5LWB7_9PHYC (A2L_zn_ribbon domain-containing protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWB7_9PHYC) HSP 1 Score: 303 bits (777), Expect = 2.050e-99 Identity = 159/321 (49.53%), Postives = 215/321 (66.98%), Query Frame = 1
Query: 7 EKFITPPVTEDFHRLARRAKTNLEGARPDS-KFLKKMNA---SFSDVSCTIDSFVD----VRRPSTTAGASXXXXXXXXXXAEGQVEEESFHRADERDNHLSKEWICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKSTI 945
E + P F + R+A T+ A P S FLKKMNA + S++ C+ID FVD V++ + GA D ++++W CE CN +LVY++KDA+RVCP+CG S +QEMTR D + QGY T Y+Y+R NHFK W+KRTQG ETT + ++ + V+ EL+K+R+ D+S V H+K++ ILKKLR N++YN+CVQITS++TG PPQMT EQE SL++MFE +Q PFEE I+ + RQNMLSYSFLIHKFL+IMS D+YLPYFPLL S +KI+ QD IW +LC +V F++IKST+
Sbjct: 11 EDGVAAPDVPSFSDVVRKA-THTHAAAPRSIDFLKKMNAREIAKSNILCSIDGFVDRRVRVKKMADKPGA---------------------------DKTVAQDWRCEDCNADLVYVKKDAQRVCPECGRSTFFQEMTRSDMISQGYTPPTTYLYQRHNHFKTWIKRTQGKETTAIAPEITELVKKELRKERITDMSKVDHIKIKAILKKLRKNRYYNHCVQITSIVTGRSPPQMTDEQEESLVQMFERVQVPFEEKIKGKKRQNMLSYSFLIHKFLQIMSLDEYLPYFPLLVSADKIQVQDSIWQELCKEVNFEFIKSTM 303
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: Q6XM16_9PHYC (FirrV-1-B20 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM16_9PHYC) HSP 1 Score: 281 bits (719), Expect = 1.190e-90 Identity = 130/230 (56.52%), Postives = 176/230 (76.52%), Query Frame = 1
Query: 256 HRADERDNHLSKEWICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKSTI 945
H +RD + +++W C+ CN LVY++KDA+RVC +CG S +QEMTR D + QGY T Y+Y+R NHFK W+KRTQG ETT + ++ VR ELKK+R+ D+S V H+K++ ILKKLR N++YN+CVQIT+M+TG PPQMT QE +L++MFE +Q FE+ I+ + RQNMLSYSFLIHKFL+I+S D+YLPYFPLL S +KI+ QD IW +LC +V F++IKST+
Sbjct: 73 HHPGQRDKNNAQDWRCDDCNATLVYVKKDAQRVCLECGKSTFFQEMTRGDMILQGYTPTTTYLYQRLNHFKTWIKRTQGKETTTISPEITAMVRKELKKERITDMSKVDHIKIKAILKKLRKNRYYNHCVQITTMVTGKAPPQMTDRQEETLVQMFEKVQIAFEKKIKGKKRQNMLSYSFLIHKFLQILSLDEYLPYFPLLVSADKIQIQDSIWQELCIEVNFEFIKSTM 302
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: A0A835Z3I5_9STRA (Poxvirus late transcription factor VLTF3 like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I5_9STRA) HSP 1 Score: 172 bits (437), Expect = 1.370e-48 Identity = 102/286 (35.66%), Postives = 161/286 (56.29%), Query Frame = 1
Query: 88 PDSKFLKKMNASFSDVSCTIDSFVDVRRPSTTAGASXXXXXXXXXXAEGQVEEESFHRADERDNHLSKEWICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKK-QRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKST 942
PD+KF+K+M S+V+C++++F+ V P TT EE A +D+ CE CN + + A+ +C CGLS Y M D R+G H+ Y+YKR NH + L R G E+TQ++ +VI+R+ EL K R ++ V+ +R +LK+L L++ YN+ +I ++ TG P +T QE LL +F LIQ P+E++ R + R+N LSYS+L+HK ++ + D +F LL+S EK+ +QD W K+CA +GF++ +S
Sbjct: 17 PDAKFVKRMKIP-SNVNCSLNNFIIVSAPKTT--------------------EEDLEDAVNQDDDA----YCELCNTVKQFDARTAQAICLTCGLSSTY--MVPDTSYREGVSIHSPYLYKRINHCRDHLHRITGRESTQIEPEVIERISSELAKTHRPEELCNVTQTDIRLLLKRLGLSRLYNHTTRIWALTTGGKPLVLTQTQEQELLHLFNLIQVPWEKL-RPKNRKNFLSYSYLLHKLSLLLGYTDVASHFKLLKSKEKVHFQDLYWQKICAAMGFRFERSV 274
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: A0A835Z4D5_9STRA (Poxvirus late transcription factor VLTF3 like-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D5_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.410e-47 Identity = 91/225 (40.44%), Postives = 140/225 (62.22%), Query Frame = 1
Query: 271 RDNHLSKEWICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVS--TVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKS 939
RD+ + +C+ CNR V + A C CG S + + R R+G HT Y+YKR NHF+ LKR ETT +++DV++ +R EL+K+ D S VS +VR++LK+L L+ YN+ +I +++TG PP++T QE +L+ MF +IQ PFE+ KE R NMLSYS++I + +++ + D F LL+S EK+ YQD IW K+C ++G++Y +S
Sbjct: 69 RDDFVPDAHLCDPCNRPRVIDTRQATATCSRCGDSQTFNVIDRS--FREGTSLHTPYLYKRSNHFRDHLKRFAARETTTIEDDVLEAIRTELRKRVYDDASFKNVSQDEVRDVLKRLSLSHLYNHSTRIWTLLTGHQPPELTETQEQNLVVMFAMIQAPFEKHKPKE-RSNMLSYSYVISQCAKLLGYHDIARAFKLLKSKEKVVYQDAIWRKICEELGWRYARS 290
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: A0A6C0JP27_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JP27_9ZZZZ) HSP 1 Score: 172 bits (435), Expect = 5.960e-47 Identity = 82/214 (38.32%), Postives = 134/214 (62.62%), Query Frame = 1
Query: 298 ICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKS 939
IC+ CN L ++ +A +C +CG L+Q + + YKR NHF+ W + QG E+T + +++ +++ E+KK++++D T+++ K+REILK+LR+NK+Y + I + I G+P PQ + E E L MF IQ PF + K+ R+N LSYS++++KF +I+ ++YL YFPLL+S EK+ QD IW K+C ++G+ I S
Sbjct: 184 ICKECNSSLTCLQHEAIMICENCGYQELLLVEQNRPILKQNAKDTSHFSYKRINHFREWCNQVQGKESTDIPDEIFEKILNEIKKEKISDTKTITYTKMREILKRLRINKYYEHINYILNRINGIPTPQFSPELEDRLCIMFRDIQAPFLKHCPKD-RKNFLSYSYVLYKFFQILGLNEYLKYFPLLKSREKLYLQDQIWKKICEELGYPIIPS 396
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: A0A6C0DKZ7_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKZ7_9ZZZZ) HSP 1 Score: 171 bits (434), Expect = 1.190e-46 Identity = 82/214 (38.32%), Postives = 134/214 (62.62%), Query Frame = 1
Query: 298 ICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKS 939
IC CN L+ +++DA +C +CG L+Q + + YKR NHF+ W + QG E+T + D+ +++ E+KK+++ D +++ K+REILK+LR+NK+Y + I + I G+P PQ + E E L MF+ IQ PF + K+ R+N LSYS++++KF +I+ ++YL +FPLL+S EK+ QD IW K+C ++G++ I S
Sbjct: 200 ICHLCNIPLICLQQDAIMICSNCGYQELLLVEQNRPILKQNTKDTSHFSYKRINHFREWCNQVQGKESTDIPNDIFEKILNEIKKEKIMDTKKITYSKMREILKRLRINKYYEHINYIINRINGIPTPQFSAELEEKLCSMFKDIQAPFLKHCPKD-RKNFLSYSYVLYKFFQILGLNEYLKFFPLLKSREKLYVQDQIWKKICEELGYKVIPS 412
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: A0A6C0IZV0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IZV0_9ZZZZ) HSP 1 Score: 171 bits (433), Expect = 1.820e-46 Identity = 82/214 (38.32%), Postives = 130/214 (60.75%), Query Frame = 1
Query: 298 ICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKS 939
IC CN + + DA +C +CG L+Q + + YKR NHF+ W + QG E+T + +++ +++ E+KK+++ D T+++ K+REILK+LR+NK+Y + I + I G+P PQ + E E L MF IQ PF + K+ R+N LSYS++++KF +I+ D+YL YFPLL+S EK+ QD IW K+C ++ + I S
Sbjct: 204 ICRVCNTSMTCYQHDAIMICNNCGYQELLLVEQNRPILKQNTKDTSHFSYKRINHFREWCNQVQGKESTDIPDEIFEKILNEIKKEKILDTKTITYSKMREILKRLRINKYYEHINYIINRINGIPTPQFSPELEDKLCNMFRNIQVPFLKHCPKD-RKNFLSYSYVLYKFFQILGLDEYLKYFPLLKSREKLYVQDQIWKKICEELNYDIIPS 416
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: A0A7S9XEB1_9VIRU (Late transcription factor VLTF3 like protein n=1 Tax=Virus NIOZ-UU159 TaxID=2763270 RepID=A0A7S9XEB1_9VIRU) HSP 1 Score: 171 bits (433), Expect = 3.480e-46 Identity = 81/214 (37.85%), Postives = 133/214 (62.15%), Query Frame = 1
Query: 298 ICEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHTAYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKS 939
IC+ C +++ +++DA +C CG L+Q + + YKR NHF+ W + QG E+T + ++V ++ E+KK+++ D+ T+++ K+R+ILK+LR+NK+Y + I + I G+P PQ + E E L MF IQ PF + K+ R+N LSYS++++KF +I+ D+YL YFPLL+S EK+ QD IW K+C + ++ I S
Sbjct: 235 ICKECKSKMICLQQDAIMICNTCGYQELLLVEQNRPILKQNTKDTSHFCYKRINHFREWCNQVQGKESTDIPDEVFVKILAEIKKEKIVDLKTITYTKMRDILKRLRINKYYEHINYIINRINGIPTPQFSPELEEKLCSMFRSIQAPFLKHCPKD-RKNFLSYSYVLYKFFQILGLDEYLKYFPLLKSREKLYVQDQIWKKICIDLNYENIPS 447
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Match: A0A5E8CHP0_9ZZZZ (Poxvirus Late Transcription Factor VLTF3 like n=1 Tax=seawater metagenome TaxID=1561972 RepID=A0A5E8CHP0_9ZZZZ) HSP 1 Score: 169 bits (429), Expect = 4.450e-46 Identity = 89/217 (41.01%), Postives = 132/217 (60.83%), Query Frame = 1
Query: 301 CEACNRELVYIRKDAERVCPDCGLSHPYQEMTRDDCLRQGYVTHT----AYMYKRQNHFKAWLKRTQGNETTQVDEDVIDRVRLELKKQRVADVSTVSHVKVREILKKLRLNKHYNNCVQITSMITGVPPPQMTHEQETSLLRMFELIQEPFEEIIRKEPRQNMLSYSFLIHKFLEIMSWDDYLPYFPLLRSVEKIRYQDWIWSKLCAKVGFQYIKS 939
CE CN E + D +C CG EM D R Y + Y YKR NHF WL + Q E+T++ +DV D+V LE+ + R+ +++ +S K+R+ILKKLRLNK+Y + I + + G+PPP+++ E E L MF IQEPF + R + R+N LSYS+++HKF E++ D++LP FPLL+S EK+ QD +W K+C V +++ S
Sbjct: 184 CEHCNTEKILSACDGMFICTKCGDC----EMAIVDSDRPNYKDPSKDTSTYAYKRINHFNEWLNQFQAKESTEIPKDVYDKVLLEINRLRITNLAELSADKMRKILKKLRLNKYYEHIPHIINKLNGLPPPKLSRETERKLRHMFREIQEPFT-LYRPKGRKNFLSYSYILHKFCELLELDEFLPCFPLLKSHEKLLQQDKVWKKICQHVNWEFYPS 395 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig15.48.1 >prot_P-littoralis_Contig15.48.1 ID=prot_P-littoralis_Contig15.48.1|Name=mRNA_P-littoralis_Contig15.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=316bp MDEKFITPPVTEDFHRLARRAKTNLEGARPDSKFLKKMNASFSDVSCTIDback to top mRNA from alignment at P-littoralis_Contig15:134435..135382+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig15.48.1 ID=mRNA_P-littoralis_Contig15.48.1|Name=mRNA_P-littoralis_Contig15.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=948bp|location=Sequence derived from alignment at P-littoralis_Contig15:134435..135382+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig15:134435..135382+ >mRNA_P-littoralis_Contig15.48.1 ID=mRNA_P-littoralis_Contig15.48.1|Name=mRNA_P-littoralis_Contig15.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=948bp|location=Sequence derived from alignment at P-littoralis_Contig15:134435..135382+ (Pylaiella littoralis U1_48)back to top |