prot_P-littoralis_Contig15.45.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig15.45.1
Unique Nameprot_P-littoralis_Contig15.45.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length309
Homology
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BLAST of mRNA_P-littoralis_Contig15.45.1 vs. uniprot
Match: D8LPD7_ECTSI (FirrV-1-B24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPD7_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 3.550e-154
Identity = 223/310 (71.94%), Postives = 246/310 (79.35%), Query Frame = 0 
Query:    3 TPVIPDAVLDFFAGSGGINILASPLFLEKHTGSGRVYLPDHDIYHAGKDSGGKPVYTVYRIVGKEYKHNTIQGMLRVRLVSGYGVKGGGADGADG--LMRPNDLKRLMTEGTTSIKRNSVVVFQTGMVARLEDIEIFCDLPLINKWDLVKKDSADAICKRDMYKATRGEENWAHVKQGALIRDMESSVHQLILPYYRRYRENKNDPQHFFRAFMEDMVRTCTAHHTNFTTGCSFDELLGDIAEKSRKRSFPSLQTETRPRKKWGG--GGTPCAPRAPVGQAVEPMVPMETDIVAATLKHVSREKIAQIIF 308
            +PVIP +VL FFAGSGG+NILASPLFL+KHTG  RV LP HDIYHAGKD  G  VYTVYRI+ KEYKHNTIQGML V LVSGYGVK     G+     MRPNDLK+LMTEGTTSIKRNSVVVFQTGMV RLEDIEIFCDLPLINK DL++K S  A+CKRDMYKATRGE+NWAHVK GALI+DMESSVHQL+LPYYRRYR+N ND QHFFRAFMEDM+RTC AHH NF  G  FD+LL  I E+++KRS PSLQTETRPRKKWGG        P  PV   V  +   + D+V   LK+VSREKIA IIF
Sbjct:    6 SPVIPSSVLAFFAGSGGVNILASPLFLQKHTGRSRVVLPTHDIYHAGKDKEGNAVYTVYRILAKEYKHNTIQGMLCVSLVSGYGVKDDSVRGSSNSVFMRPNDLKKLMTEGTTSIKRNSVVVFQTGMVVRLEDIEIFCDLPLINKRDLIEKQSVGAVCKRDMYKATRGEDNWAHVKAGALIKDMESSVHQLLLPYYRRYRDNSNDSQHFFRAFMEDMIRTCDAHHKNFIEGEHFDDLLTGIVERNKKRSCPSLQTETRPRKKWGGKLDAAGSGPETPVSPTVSGVTKTKRDLVKDALKNVSREKIASIIF 315
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig15.45.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPD7_ECTSI3.550e-15471.94FirrV-1-B24 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig15contigP-littoralis_Contig15:130421..131863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig15.45.1mRNA_P-littoralis_Contig15.45.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig15 130421..131863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig15.45.1 ID=prot_P-littoralis_Contig15.45.1|Name=mRNA_P-littoralis_Contig15.45.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=309bp
MSTPVIPDAVLDFFAGSGGINILASPLFLEKHTGSGRVYLPDHDIYHAGK
DSGGKPVYTVYRIVGKEYKHNTIQGMLRVRLVSGYGVKGGGADGADGLMR
PNDLKRLMTEGTTSIKRNSVVVFQTGMVARLEDIEIFCDLPLINKWDLVK
KDSADAICKRDMYKATRGEENWAHVKQGALIRDMESSVHQLILPYYRRYR
ENKNDPQHFFRAFMEDMVRTCTAHHTNFTTGCSFDELLGDIAEKSRKRSF
PSLQTETRPRKKWGGGGTPCAPRAPVGQAVEPMVPMETDIVAATLKHVSR
EKIAQIIF*
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