prot_P-littoralis_Contig148.109.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig148.109.3
Unique Nameprot_P-littoralis_Contig148.109.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length912
Homology
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: D7G7U9_ECTSI (E3 ubiquitin protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U9_ECTSI)

HSP 1 Score: 1199 bits (3103), Expect = 0.000e+0
Identity = 719/919 (78.24%), Postives = 779/919 (84.77%), Query Frame = 0
Query:    1 MKRGVSDAGAAISPGPSKLQKTALDKGGGSDGDNNGGPDGKSILQQQNHELAVDMRRRKRQQTELENKLAQAWAKQGHFDATLSAVNRAWSQASGIRHAVLSDLTTAAGELGLGPRPVEVSVAPDXXXXXXXXXXXXXXXEGEVIIVSVKNGLSGEKEQAVMPAEGKEDVSELSIIQKLIMPAAEVLAMDATDYSCGDRLLKGMGKNPEKPDEPTTARERLAGMAGTSSAFYDLDSDGYGLKSRESVKAAAAPDIAEVEKALKEKARFTAELAGRLFQALQAHLMALPPESRRQTLDKALLDMVGQKKRLEAERTFLSDQLTQQARKRCIELSESVTFLREDYRKANRTLDKLAADGVIMEILPEKNSVG-GGRGGNPFGRGNSTGSAAGGGF----SYTIGNGFALKRG---AGDPEDLIAALEEAQALSDTRLKEMERCRAEKAEAEKELTRWKASTELDTQRSDLSGHPQFQRLSTQLEAEQDMLKLEKARVKELEGQMKQMSIQLDQHEMALHQQMEQQRLRWKSEIVSSNSMLNAAHEDLDKAQGKLKHEQRFGSGMLKSVTIAKEEAERLLKQTEQQVSILKASLDRATKAKEHAEAQAAKDRTRLDRQGASAXXXXXXXREDENLRAKFADSLRQLEGSKAIEDALQSELNTTLAAYAQSKEGNQKLVQEMTRISASRKELSDEVTSTKAQLKNRAKVRATMELQIKTAMQMRDQGHALKQKALELVTEAEQKVQQERKQNLELTREVHTEKAHADRARQEVDALTQTKQAVEKAHSALKEHCERLNANVAKAGEDVXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXSVKSSTENFDSKAEDNEMRDAELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            MKRGVSD GAA SPGPSKLQKT+     GSDGDN GGPD KSILQQQNHELAVDMRRRKRQ+ ELE KL QAWA+QGHFDATLS+VNRAW Q       VLSDL+TAAGELGLGPRP+ V+VAP   XXXXXXXXXXX  EGEVI+VSVK+GLS       +P EG+E  SELSI+QKLIMPA+EVLAMDAT++SCGDRLLKGMGK PEK +E  ++RERLAGMAGTS+AFYDLD+DGYGLKSRESVKA AA DIAE++KALKEKARFT ELAGRLFQALQAHLMALPPESR+ TLDKA L+MVG+KKRLEAER FLSD+LTQ ARKRC+ELSESVT LRE+ RKANRTLDKLAADGVI+E+  EK + G GGR      RG++ G AA        +Y++G G+  KRG   AGD EDL+AALEEAQ L++TRLKEMER R EK EAE+ELT++KASTEL+T+++DLSGHPQFQRLSTQLEAEQDMLKLEKARV ELEGQ+KQMS Q++QHEMAL QQMEQQRLRWKSEIVSSNSMLN AHEDLDKAQGKLKHEQRFGSGMLKSVTIAKEEAERLLKQTEQQVSILKASLDRATKAKEHAEAQAAKDR RL+RQGA  XXXXXXXREDENLRAK ADSLRQLEGSKAIEDALQSELNTTLAAYAQSKEGNQKLVQEMTRISASRKELSDEVTSTKAQLKNRAKVRATMELQIKTAMQMRDQGHALKQKAL+LV EAE+KVQ ERKQNLEL REVHTEKAHADRARQEVD LTQTKQAVE AHSALK HCE+LN+ V K  E+V         L                    + K++      + EDNEMRDAELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPAC K Y  DDVHELWLT
Sbjct:    1 MKRGVSDTGAATSPGPSKLQKTSS----GSDGDN-GGPDAKSILQQQNHELAVDMRRRKRQEAELEKKLTQAWARQGHFDATLSSVNRAWRQ-------VLSDLSTAAGELGLGPRPLNVTVAPGGDXXXXXXXXXXXE-EGEVIMVSVKDGLS-------VPVEGQEPASELSIMQKLIMPASEVLAMDATEFSCGDRLLKGMGKKPEKSEEAASSRERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAATDIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRKDTLDKAQLEMVGKKKRLEAERDFLSDELTQ-ARKRCMELSESVTSLRENCRKANRTLDKLAADGVIVEVPSEKGTSGTGGR------RGSAEGGAAXXXXXXXSTYSVGTGY--KRGVNGAGDVEDLLAALEEAQTLAETRLKEMERWRTEKTEAERELTQFKASTELETKKADLSGHPQFQRLSTQLEAEQDMLKLEKARVTELEGQIKQMSGQVEQHEMALQQQMEQQRLRWKSEIVSSNSMLNTAHEDLDKAQGKLKHEQRFGSGMLKSVTIAKEEAERLLKQTEQQVSILKASLDRATKAKEHAEAQAAKDRARLERQGAXXXXXXXXXREDENLRAKLADSLRQLEGSKAIEDALQSELNTTLAAYAQSKEGNQKLVQEMTRISASRKELSDEVTSTKAQLKNRAKVRATMELQIKTAMQMRDQGHALKQKALDLVAEAEEKVQHERKQNLELAREVHTEKAHADRARQEVDFLTQTKQAVETAHSALKVHCEQLNSKVGKVEEEVNSTKEQVATLTRRLEKSRSLNAKLVEQVKETAKNTNSLSKVEEEDNEMRDAELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACGKVYAPDDVHELWLT 890          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: A0A6H5KZC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC3_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 3.690e-124
Identity = 233/325 (71.69%), Postives = 256/325 (78.77%), Query Frame = 0
Query:   35 NGGPDGKSILQQQNHELAVDMRRRKRQQTELENKLAQAWAKQGHFDATLSAVNRAWSQASGIRHAVLSDLTTAAGELGLGPRPVEVSVAPDXXXXXXXXXXXXXXXEGEVIIVSVKNGLSGEK------------------------------------EQAVMPAEGKEDVSELSIIQKLIMPAAEVLAMDATDYSCGDRLLKGMGKNPEKPDEPTTARERLAGMAGTSSAFYDLDSDGYGLKSRESVKAAAAPDIAEVEKALKEKARFTAELAGRLFQALQAHLMALPPESRRQTLDKALLDMVGQKKRLEAERTFLSDQLTQ 323
            NGGPD KSIL+QQNHELAVDMRRRKRQ+ ELE KLAQAWA+QGHFDATLSAVNRAW Q       VLSDL+TAAGELGLGPRP+ VSVAP   XXXXXXXXXXXX EGEVI+VSVK+GLSGE                                     +   +P EG+E  SELSI+QKLIMPAAE+LAMDAT++SCGDRLLKGMGK PEK +E  +ARERLAGMAGTS+AFYDLD+DGYGLKSRESVKA AA DIAE++KALKEKARFT ELAGRLFQALQAHLMALPPESRR TLDKA L+MVG+KKRLEAER FLSD+LTQ
Sbjct:   13 NGGPDAKSILRQQNHELAVDMRRRKRQEAELEKKLAQAWARQGHFDATLSAVNRAWRQ-------VLSDLSTAAGELGLGPRPLNVSVAPGGDXXXXXXXXXXXXEEGEVIMVSVKDGLSGETFLLFFSQSDTPHSHYIMDANTSDALRPSSHRVLLPTQWTPVPVEGREPASELSIMQKLIMPAAEILAMDATEFSCGDRLLKGMGKKPEKSEEAASARERLAGMAGTSNAFYDLDTDGYGLKSRESVKAEAAADIAELDKALKEKARFTGELAGRLFQALQAHLMALPPESRRDTLDKAQLEMVGKKKRLEAERDFLSDELTQ 330          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: A0A7S2Y421_9STRA (E3 ubiquitin protein ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y421_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 6.010e-18
Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 0
Query:  839 AEDNEMRDAELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            A D  + + E+ EL+ M++CSVCQD++KN V+TKCFHMFC  C+++++K R+RKCPAC + +G DDV  +WLT
Sbjct:  253 AADVYLLEEEVKELKTMLRCSVCQDRRKNTVLTKCFHMFCRECVQENLKIRSRKCPACGRMFGQDDVRTIWLT 325          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: A0A662Y869_9STRA (E3 ubiquitin protein ligase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y869_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.160e-17
Identity = 39/64 (60.94%), Postives = 53/64 (82.81%), Query Frame = 0
Query:  848 ELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            EL +L+K++KCSVCQD++K+ +ITKCFHMFC  C++ ++KSRNRKCP C K +G DDV  +WLT
Sbjct:  805 ELRDLQKLVKCSVCQDRRKDVIITKCFHMFCKECVDNNLKSRNRKCPTCKKMFGQDDVKAVWLT 868          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: A0A2P4YBG3_9STRA (E3 ubiquitin protein ligase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YBG3_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.630e-17
Identity = 36/64 (56.25%), Postives = 51/64 (79.69%), Query Frame = 0
Query:  848 ELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            EL +L+K++ CSVCQD++K+ +I+KCFHMFC  C++ ++KSRNRKCP C K +G DDV  +W T
Sbjct:  261 ELRDLQKLVNCSVCQDRRKDVIISKCFHMFCKECIDNNLKSRNRKCPTCKKMFGHDDVKTVWFT 324          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: A0A5D6XN03_9STRA (E3 ubiquitin protein ligase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XN03_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 3.450e-17
Identity = 38/64 (59.38%), Postives = 51/64 (79.69%), Query Frame = 0
Query:  848 ELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            EL EL+K++KCSVCQD++KN ++ KCFHMFC  C++ ++KSRNRKCP C K +G DDV  +W T
Sbjct:  797 ELAELQKLVKCSVCQDQRKNVLLAKCFHMFCRDCVDSNLKSRNRKCPTCKKMFGQDDVKAVWFT 860          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: A0A225WEA7_9STRA (E3 ubiquitin protein ligase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WEA7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 4.750e-17
Identity = 33/64 (51.56%), Postives = 50/64 (78.12%), Query Frame = 0
Query:  848 ELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            EL +L+K++ CSVCQD++K+ +I+KCFHMF   C++ ++K+RNRKCP C K +G DD+  +W T
Sbjct:  101 ELRDLQKLVNCSVCQDRRKDVIISKCFHMFYKECIDNNLKARNRKCPTCKKMFGQDDIKSVWFT 164          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: G4YGB4_PHYSP (E3 ubiquitin protein ligase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YGB4_PHYSP)

HSP 1 Score: 96.3 bits (238), Expect = 1.290e-16
Identity = 37/64 (57.81%), Postives = 51/64 (79.69%), Query Frame = 0
Query:  848 ELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            EL +L+K++ CSVCQD++K+ +I+KCFHMFC  C+E ++KSRNRKCP C K +G DDV  +W T
Sbjct:  748 ELRDLQKLVNCSVCQDRRKDVIISKCFHMFCKECIENNLKSRNRKCPTCKKMFGHDDVKSVWFT 811          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: W2QVV9_PHYPN (E3 ubiquitin protein ligase n=9 Tax=Phytophthora TaxID=4783 RepID=W2QVV9_PHYPN)

HSP 1 Score: 96.3 bits (238), Expect = 1.330e-16
Identity = 37/64 (57.81%), Postives = 51/64 (79.69%), Query Frame = 0
Query:  848 ELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            EL +L+K++ CSVCQD++K+ +I+KCFHMFC  C+E ++KSRNRKCP C K +G DDV  +W T
Sbjct:  774 ELRDLQKLVNCSVCQDRRKDVIISKCFHMFCKECIENNLKSRNRKCPTCKKMFGHDDVKSVWFT 837          
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Match: A0A484E9R0_BRELC (E3 ubiquitin protein ligase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9R0_BRELC)

HSP 1 Score: 96.3 bits (238), Expect = 1.360e-16
Identity = 37/64 (57.81%), Postives = 51/64 (79.69%), Query Frame = 0
Query:  848 ELGELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAYGSDDVHELWLT 911
            EL +L+K++ CSVCQD++K+ +ITKCFH+FC  C+E ++KSRNRKCP C K +G DDV  +W T
Sbjct:  794 ELRDLQKLVNCSVCQDRRKDVIITKCFHIFCKECIENNLKSRNRKCPTCKKMFGQDDVKTVWFT 857          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig148.109.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7U9_ECTSI0.000e+078.24E3 ubiquitin protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A6H5KZC3_9PHAE3.690e-12471.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2Y421_9STRA6.010e-1853.42E3 ubiquitin protein ligase n=1 Tax=Fibrocapsa jap... [more]
A0A662Y869_9STRA1.160e-1760.94E3 ubiquitin protein ligase n=2 Tax=Nothophytophth... [more]
A0A2P4YBG3_9STRA2.630e-1756.25E3 ubiquitin protein ligase (Fragment) n=1 Tax=Phy... [more]
A0A5D6XN03_9STRA3.450e-1759.38E3 ubiquitin protein ligase n=1 Tax=Pythium brassi... [more]
A0A225WEA7_9STRA4.750e-1751.56E3 ubiquitin protein ligase n=1 Tax=Phytophthora m... [more]
G4YGB4_PHYSP1.290e-1657.81E3 ubiquitin protein ligase n=1 Tax=Phytophthora s... [more]
W2QVV9_PHYPN1.330e-1657.81E3 ubiquitin protein ligase n=9 Tax=Phytophthora T... [more]
A0A484E9R0_BRELC1.360e-1657.81E3 ubiquitin protein ligase n=1 Tax=Bremia lactuca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 307..327
NoneNo IPR availableCOILSCoilCoilcoord: 754..823
NoneNo IPR availableCOILSCoilCoilcoord: 719..746
NoneNo IPR availableCOILSCoilCoilcoord: 663..683
NoneNo IPR availableCOILSCoilCoilcoord: 430..450
NoneNo IPR availableCOILSCoilCoilcoord: 336..356
NoneNo IPR availableCOILSCoilCoilcoord: 473..514
NoneNo IPR availableCOILSCoilCoilcoord: 555..603
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 857..898
e-value: 2.2E-8
score: 33.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 589..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 589..606
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availablePANTHERPTHR23163:SF0E3 UBIQUITIN-PROTEIN LIGASE BRE1coord: 42..450
coord: 466..910
NoneNo IPR availableCDDcd16499RING-HC_BRE1_likecoord: 856..896
e-value: 4.35445E-20
score: 82.2558
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 851..903
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 858..896
e-value: 5.6E-6
score: 35.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 858..897
score: 11.486073
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 838..911
e-value: 2.7E-16
score: 60.7
IPR013956E3 ubiquitin ligase Bre1PANTHERPTHR23163RING FINGER PROTEIN-RELATEDcoord: 42..450
IPR013956E3 ubiquitin ligase Bre1PANTHERPTHR23163RING FINGER PROTEIN-RELATEDcoord: 466..910
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 873..882

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig148contigP-littoralis_Contig148:396135..410735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig148.109.3mRNA_P-littoralis_Contig148.109.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig148 394653..411470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig148.109.3 ID=prot_P-littoralis_Contig148.109.3|Name=mRNA_P-littoralis_Contig148.109.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=912bp
MKRGVSDAGAAISPGPSKLQKTALDKGGGSDGDNNGGPDGKSILQQQNHE
LAVDMRRRKRQQTELENKLAQAWAKQGHFDATLSAVNRAWSQASGIRHAV
LSDLTTAAGELGLGPRPVEVSVAPDDDDDDEDDDDDENKEEGEVIIVSVK
NGLSGEKEQAVMPAEGKEDVSELSIIQKLIMPAAEVLAMDATDYSCGDRL
LKGMGKNPEKPDEPTTARERLAGMAGTSSAFYDLDSDGYGLKSRESVKAA
AAPDIAEVEKALKEKARFTAELAGRLFQALQAHLMALPPESRRQTLDKAL
LDMVGQKKRLEAERTFLSDQLTQQARKRCIELSESVTFLREDYRKANRTL
DKLAADGVIMEILPEKNSVGGGRGGNPFGRGNSTGSAAGGGFSYTIGNGF
ALKRGAGDPEDLIAALEEAQALSDTRLKEMERCRAEKAEAEKELTRWKAS
TELDTQRSDLSGHPQFQRLSTQLEAEQDMLKLEKARVKELEGQMKQMSIQ
LDQHEMALHQQMEQQRLRWKSEIVSSNSMLNAAHEDLDKAQGKLKHEQRF
GSGMLKSVTIAKEEAERLLKQTEQQVSILKASLDRATKAKEHAEAQAAKD
RTRLDRQGASASAGGGGGREDENLRAKFADSLRQLEGSKAIEDALQSELN
TTLAAYAQSKEGNQKLVQEMTRISASRKELSDEVTSTKAQLKNRAKVRAT
MELQIKTAMQMRDQGHALKQKALELVTEAEQKVQQERKQNLELTREVHTE
KAHADRARQEVDALTQTKQAVEKAHSALKEHCERLNANVAKAGEDVEKAK
EQVATLTRRLEKSRSQNAKLVEQLKESVKSSTENFDSKAEDNEMRDAELG
ELRKMIKCSVCQDKKKNRVITKCFHMFCDGCLEKSIKSRNRKCPACTKAY
GSDDVHELWLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR013956E3_ubiquit_lig_Bre1
IPR017907Znf_RING_CS