mRNA_P-littoralis_Contig1470.8.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1470.8.1
Unique NamemRNA_P-littoralis_Contig1470.8.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: A0A0R6MFW0_UNDPI (Photosystem I P700 chlorophyll a apoprotein A2 n=71 Tax=Stramenopiles TaxID=33634 RepID=A0A0R6MFW0_UNDPI)

HSP 1 Score: 363 bits (932), Expect = 8.190e-117
Identity = 216/419 (51.55%), Postives = 220/419 (52.51%), Query Frame = 1
Query:    1 EALAQDPTTRRIYF--------ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            +ALAQDPTTRRI+F        ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLY+GSIFLIALSSLLLFAG                                                                                                                                                                                               TSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVS+F
Sbjct:   10 QALAQDPTTRRIWFGIATAHDFETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYVGSIFLIALSSLLLFAGWLHLQPKFRPSLSWFKTNESRLNHHLTGLFGVSSLAWTGHLVHVAIPASRGIHVGWDNFLTTLPHPDGLTPFFDGNWNAYSQNPDTVEHIFGTNTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGAGHRGLFDTITNSLHIQLGLALAALGVTTSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLF 428          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: A0A1Z4F594_9PHAE (Photosystem I (Fragment) n=38 Tax=Phaeophyceae TaxID=2870 RepID=A0A1Z4F594_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 8.700e-116
Identity = 212/414 (51.21%), Postives = 215/414 (51.93%), Query Frame = 1
Query:   16 DPTTRRIYF--------ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            DPTTRRI+F        ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLY+GSIFLIALSSLLLFAG                                                                                                                                                                                               TSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVS+F
Sbjct:    1 DPTTRRIWFGIATAHDFETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYVGSIFLIALSSLLLFAGWLHLQPKFRPSLSWFKTNESRLNHHLTGLFGVSSLAWTGHLVHVAIPASRGIHVGWDNFLTTLPHPDGLTPFFDGNWNAYSQNPDTVEHIFGTSTGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIIAGHMYRTNFAIGHNMKEILDAHRPPGGRLGAGHRGLFDTITNSLHIQLGLALASLGVTTSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSLF 414          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: A0A0H5BB96_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0H5BB96_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 2.090e-109
Identity = 198/397 (49.87%), Postives = 201/397 (50.63%), Query Frame = 1
Query:   43 ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            ETHDGMTEENLYQK+FASHFGHLAIIFLWTSGNLFHVAWQGNFEQW LNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLY GSIFLI LSSLLLFAG                                                                                                                                                                                              ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE N+DNVLARMLEHKEAIISH  WVS+F
Sbjct:    1 ETHDGMTEENLYQKLFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWVLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYTGSIFLIVLSSLLLFAGWLHLQPKFRPSLSWFKNNESRLNHHLTGLFGVSSLAWTGHLVHVAIPESRGIHIGWNNFLTSLPHPEGLKPFFDGNWNIYSQNPDGAEHIFGTTKGAGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAVVFIVAGHMYRTNFGIGHNMKEILDAHRPPGGRLGAGHRGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEMNKDNVLARMLEHKEAIISHFCWVSLF 397          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: A0A7T7IGM3_9STRA (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Stichogloea TaxID=82160 RepID=A0A7T7IGM3_9STRA)

HSP 1 Score: 341 bits (874), Expect = 3.640e-108
Identity = 205/419 (48.93%), Postives = 213/419 (50.84%), Query Frame = 1
Query:    1 EALAQDPTTRRIYF--------ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            +ALAQDPTTRRI+F        ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQW LNPLKVKPIAHTIWDPHFGE A+KAFTK GAFYPVNISYSGVY WWYTIGMRTNNDLY+GSIFLI  SSL LFAG                                                                                                                                                                                              ITSLVAQHMYAIPPYAFMAKDFTT+AALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEAN++NVLARMLEHKEAIISHLSWV +F
Sbjct:   10 QALAQDPTTRRIWFGIATAHDFETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWVLNPLKVKPIAHTIWDPHFGEPAIKAFTKAGAFYPVNISYSGVYQWWYTIGMRTNNDLYLGSIFLILASSLFLFAGWLHLQPKFRPSLSWFKNNESRLNHHLSGLFGVSSLAWTGHLVHVAIPESRGIHVGWDNFLTTLPHPEGLAPFFSGNWNVYAQSPDTAQHIFGTGEGSGSAILTFLGGFHPQSQSLWLTDMAHHHLAIAVIFIIAGHMYRTNFGIGHNMKEILDAHRPPGGRLGAGHFGLFDTVTNSLHMQLGLALASLGVITSLVAQHMYAIPPYAFMAKDFTTEAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKNNVLARMLEHKEAIISHLSWVCLF 428          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: A0A4U5Q400_POPAL (Photosystem I n=1 Tax=Populus alba TaxID=43335 RepID=A0A4U5Q400_POPAL)

HSP 1 Score: 330 bits (846), Expect = 2.040e-105
Identity = 172/291 (59.11%), Postives = 199/291 (68.38%), Query Frame = 1
Query:    1 EALAQDPTTRRIYF--------ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSL--------------LLFAG------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            + LAQDPTTRRI+F        E+HD +TEE LYQ IFASHFG LAIIFLWTSGNLFHVAWQGNFE W  +PL V+PIAH IWDPHFG+ A++AFT+GGA  PVNI+YSGVY WWYTIG+RTN DLYIG++FL+ LS++              L F G                                                ITSLVAQHMY++P YAF+A+DFTTQAALYTHHQYIAGF+M GAFAHGAIFF+RDY+PE N+DNVLARML+HKEAIISHLSW S+F
Sbjct:   10 QGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFETWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYIGALFLLFLSAVSLLGVGYTYNRNGNLAFRGSKMPNLVSTTICQDYLEGRLGRGHKGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNEDNVLARMLDHKEAIISHLSWASLF 300          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: B7T242_VAULI (Photosystem I P700 chlorophyll a apoprotein A2 n=2 Tax=Ochrophyta TaxID=2696291 RepID=B7T242_VAULI)

HSP 1 Score: 331 bits (849), Expect = 1.900e-104
Identity = 198/419 (47.26%), Postives = 210/419 (50.12%), Query Frame = 1
Query:    1 EALAQDPTTRRIY--------FETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            +ALAQDPTTRRI+        FETHDGMTEE LYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFE W LNPLKVKPIAHTIWDPHFGE A+KAFTKGGAFYPVNI+YSGVYHWWYTIGMRTNNDLY+GSI LI LS+L LFAG                                                                                                                                                                                              +TSL AQHMYA+ PY FMAKD+TTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE N++NVLARMLEHKEAIISHLSWVS+F
Sbjct:   10 QALAQDPTTRRIWYGIATAHDFETHDGMTEEKLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEDWILNPLKVKPIAHTIWDPHFGEPALKAFTKGGAFYPVNIAYSGVYHWWYTIGMRTNNDLYLGSIGLIILSALFLFAGGLHLQPKFRPSLSWFKNNESRLNHHLSGLFGVSSLAWTGHLVHVAIPESRGTHIGWDNFLTTPPHPEGLVPFFNGNWNIYASNPDTIQHVFGTNQGAGSAILTFLGGFNPQTQSLWLTDMAHHHLAIAVIFIIAGHMYKTNFGIGHNMKEILDAHRPPGGRLGTGHKGLFDTITNSLHMQLGLALASLGVVTSLTAQHMYALSPYVFMAKDYTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEINKNNVLARMLEHKEAIISHLSWVSLF 428          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: A0A2G2X5T5_CAPBA (Photosystem I n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X5T5_CAPBA)

HSP 1 Score: 327 bits (838), Expect = 3.050e-104
Identity = 169/289 (58.48%), Postives = 198/289 (68.51%), Query Frame = 1
Query:    1 EALAQDPTTRRIYF--------ETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLL--------------FAG----------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            + LAQDPTTRRI+F        E+HD +TEE+ YQ IFASHFG LAIIFLWTSGNLFHV+WQGNFE W  +PL V+PIAH IWDPHFG+ A++AFT+GGA  PVNI+YSGVY WWYTIG+RTN DLY G++FL+ LS++ L              F G                                              ITSLVAQHMY++P YAF+A+DFTTQAALYTHHQYIAGF+M GAFAHGAIFF+RDY+PE N+DNVLARML+HKEAIISHLSW S+F
Sbjct:   10 QGLAQDPTTRRIWFGIATAYDFESHDDITEEHFYQNIFASHFGQLAIIFLWTSGNLFHVSWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNQDLYTGALFLLFLSAISLMQVGYTYNRNGNRAFPGSKNAEYLLNHHLSGLFGVSSLAWTGHLVHVAIPAPEGSLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNEDNVLARMLDHKEAIISHLSWASLF 298          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: A0A1X9PTV0_9RHOD (Photosystem I P700 chlorophyll a apoprotein A2 n=11 Tax=Rhodophyta TaxID=2763 RepID=A0A1X9PTV0_9RHOD)

HSP 1 Score: 329 bits (844), Expect = 1.080e-103
Identity = 197/419 (47.02%), Postives = 209/419 (49.88%), Query Frame = 1
Query:    1 EALAQDPTTRRIY--------FETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            +ALAQDP TRRI+        FE+HDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQW LNP+K KPIAH IWDPHFG+ A+KAFTKGG  YPVNI+YSGVYHWWYTIGMRTN+DLY  S+FL+ LSSL LFAG                                                                                                                                                                                              ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE N+DNVLARMLEHKEAIISHLSWVS+F
Sbjct:   10 QALAQDPATRRIWYGIATAHDFESHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWVLNPIKTKPIAHAIWDPHFGQPAIKAFTKGGVTYPVNIAYSGVYHWWYTIGMRTNSDLYKSSLFLLVLSSLFLFAGWLHLQSKFKPSIAWFKNNESRLNHHLSGLFGVSSLAWTGHLVHVAIPESRGQNVDWSNFTTTLPHPDGLQPFFSGNWGAYASNPDTANHIFGTSDGAGTAILTFLGGFHPQTKSLWLTDMAHHHLAIAVLFIVAGHMYRTNWGIGHSLKEILNAHTPPGGRLGAGHKGLFDTITNSLHMQLGLALAALGVITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEQNKDNVLARMLEHKEAIISHLSWVSLF 428          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: M5DES3_CHOCR (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Gigartinales TaxID=28017 RepID=M5DES3_CHOCR)

HSP 1 Score: 328 bits (842), Expect = 2.090e-103
Identity = 194/419 (46.30%), Postives = 211/419 (50.36%), Query Frame = 1
Query:    1 EALAQDPTTRRIY--------FETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            +ALAQDPTTRRI+        FE+HDGMTEENLYQKIFASHFGH+AIIFLWTSGNLFH+AWQGNFEQW LNPLK KPIAH IWDPHFG+ A+KAFTKGGA YPVN+ +SGVYHWWYTIGMRTNNDLY G++ L+ LS+L+LFAG                                                                                                                                                                                              ITSLVAQHMYA+PPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE N+DNVLARMLEHKEAIISHLSWVS+F
Sbjct:   10 QALAQDPTTRRIWYGIATAHDFESHDGMTEENLYQKIFASHFGHIAIIFLWTSGNLFHIAWQGNFEQWVLNPLKTKPIAHAIWDPHFGQPAIKAFTKGGASYPVNLCFSGVYHWWYTIGMRTNNDLYSGALLLLILSALMLFAGWLHLQPKFKPGLSWFKNNESRLNHHLSGLFGFSSLAWTGHLVHVAIPESRGQHIGWDNFTTTLPHPLGLQPFFTGKWYEYAANPDSLNHSFGTTEGAGTAILTFLGGFHPQSQSLWLTDMAHHHLAIAILFIIAGHMYKTNWGIGHNLKDILDAHKPPSGRLGLGHQGLYETITNSLHIQLGLALASLGVITSLVAQHMYAMPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEQNKDNVLARMLEHKEAIISHLSWVSLF 428          
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Match: A0A6H1U8Y4_9FLOR (Photosystem I P700 chlorophyll a apoprotein A2 n=1 Tax=Caulacanthus okamurae TaxID=152008 RepID=A0A6H1U8Y4_9FLOR)

HSP 1 Score: 328 bits (842), Expect = 2.090e-103
Identity = 194/419 (46.30%), Postives = 214/419 (51.07%), Query Frame = 1
Query:    1 EALAQDPTTRRIY--------FETHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKPIAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVSIF 663
            +ALAQDPTTRRI+        FE+HDGMTEENLYQKIFASHFGH+AIIFLWTSGNLFHVAWQGNFEQWSLNPLK+KPIAH IWDPHFG+ A+KAFTKGGA YPV+IS+SGVYHWWYTIGMRTNNDLY G++ L+ LS+++LFAG                                                                                                                                                                                              ITSLVAQHMYAIPPYAFMAKDFTTQA+LYTHHQYIAGFLMVGAFAHGAIFF+RDY+PE NQ+NVLARMLEHKEAIISHLSWVS+F
Sbjct:   10 KALAQDPTTRRIWYGIATAHDFESHDGMTEENLYQKIFASHFGHIAIIFLWTSGNLFHVAWQGNFEQWSLNPLKIKPIAHAIWDPHFGQPAIKAFTKGGASYPVDISFSGVYHWWYTIGMRTNNDLYNGALLLLILSAVMLFAGWLHLQPKFKPGLSWFKNNESRLNHHLSGLFGLSSLAWTGHLVHVAIPESRGQDINWSNFTKTLPHPSGLQPFFTGQWGTYAANPDNLNHTFGTNEGSGTAILTFLGGFHPQSQSLWLTDIAHHHLAIAIIFIIAGHMYKTNWGIGHNLKDIIDAHRPPSGKLGAGHRGLYETITNSLHMQLGLALGSLGVITSLVAQHMYAIPPYAFMAKDFTTQASLYTHHQYIAGFLMVGAFAHGAIFFIRDYNPEENQNNVLARMLEHKEAIISHLSWVSLF 428          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1470.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6MFW0_UNDPI8.190e-11751.55Photosystem I P700 chlorophyll a apoprotein A2 n=7... [more]
A0A1Z4F594_9PHAE8.700e-11651.21Photosystem I (Fragment) n=38 Tax=Phaeophyceae Tax... [more]
A0A0H5BB96_9PHAE2.090e-10949.87Photosystem I P700 apoprotein A2 (Fragment) n=2 Ta... [more]
A0A7T7IGM3_9STRA3.640e-10848.93Photosystem I P700 chlorophyll a apoprotein A2 n=3... [more]
A0A4U5Q400_POPAL2.040e-10559.11Photosystem I n=1 Tax=Populus alba TaxID=43335 Rep... [more]
B7T242_VAULI1.900e-10447.26Photosystem I P700 chlorophyll a apoprotein A2 n=2... [more]
A0A2G2X5T5_CAPBA3.050e-10458.48Photosystem I n=1 Tax=Capsicum baccatum TaxID=3311... [more]
A0A1X9PTV0_9RHOD1.080e-10347.02Photosystem I P700 chlorophyll a apoprotein A2 n=1... [more]
M5DES3_CHOCR2.090e-10346.30Photosystem I P700 chlorophyll a apoprotein A2 n=3... [more]
A0A6H1U8Y4_9FLOR2.090e-10346.30Photosystem I P700 chlorophyll a apoprotein A2 n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1470contigP-littoralis_Contig1470:14411..15440 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D1J7A4
Preferred namepsaB
PFAMsPsaA_PsaB
Model size1030
Max annot lvl2759|Eukaryota
KEGG koko:K02690
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG ModuleM00163
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0016168,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046906,GO:0048037,GO:0055035,GO:0097159,GO:1901363
Exons1
Evalue9.35e-110
EggNOG OGs28JJ8@1|root,2QRYE@2759|Eukaryota
Descriptionchlorophyll binding
Cds size639
COG categoryC
BRITEko00000,ko00001,ko00002,ko00194
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789695.4210424-UTR-P-littoralis_Contig1470:14410..144671680789695.4210424-UTR-P-littoralis_Contig1470:14410..14467Pylaiella littoralis U1_48UTRP-littoralis_Contig1470 14411..14467 +
1680789695.4413886-UTR-P-littoralis_Contig1470:15106..154401680789695.4413886-UTR-P-littoralis_Contig1470:15106..15440Pylaiella littoralis U1_48UTRP-littoralis_Contig1470 15107..15440 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789695.4322345-CDS-P-littoralis_Contig1470:14467..151061680789695.4322345-CDS-P-littoralis_Contig1470:14467..15106Pylaiella littoralis U1_48CDSP-littoralis_Contig1470 14468..15106 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1470.8.1prot_P-littoralis_Contig1470.8.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1470 14468..15106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1470.8.1

>prot_P-littoralis_Contig1470.8.1 ID=prot_P-littoralis_Contig1470.8.1|Name=mRNA_P-littoralis_Contig1470.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=213bp
MTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKP
IAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLY
IGSIFLIALSSLLLFAGITSLVAQHMYAIPPYAFMAKDFTTQAALYTHHQ
YIAGFLMVGAFAHGAIFFVRDYDPEANQDNVLARMLEHKEAIISHLSWVS
IFRFSYIRFIYS*
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mRNA from alignment at P-littoralis_Contig1470:14411..15440+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1470.8.1 ID=mRNA_P-littoralis_Contig1470.8.1|Name=mRNA_P-littoralis_Contig1470.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1030bp|location=Sequence derived from alignment at P-littoralis_Contig1470:14411..15440+ (Pylaiella littoralis U1_48)
GAAGCTTTAGCACAAGATCCGACAACTCGAAGAATTTACTTCGAAACCCA CGACGGCATGACAGAAGAAAATTTATATCAGAAAATCTTTGCTTCACATT TTGGTCATTTAGCAATTATTTTTCTTTGGACATCAGGTAATTTATTCCAT GTTGCTTGGCAAGGTAATTTCGAACAATGGTCTTTAAACCCATTAAAAGT GAAACCTATTGCTCATACAATTTGGGACCCTCATTTTGGTGAACTTGCAA TGAAAGCATTTACAAAGGGTGGTGCTTTTTATCCAGTAAATATCTCTTAT TCAGGTGTTTACCATTGGTGGTATACTATTGGAATGAGAACAAATAATGA TTTATACATTGGGTCTATTTTTTTAATAGCTTTATCTAGTTTATTATTAT TTGCTGGTATAACATCTTTAGTTGCTCAACATATGTATGCAATCCCACCT TACGCATTTATGGCAAAAGATTTCACAACACAGGCAGCTCTTTATACTCA CCACCAATATATCGCTGGATTTTTAATGGTCGGAGCATTTGCCCATGGTG CAATCTTCTTTGTTCGAGATTATGATCCAGAAGCAAACCAAGATAATGTT TTAGCGAGAATGCTTGAACATAAAGAAGCGATTATTTCTCATTTAAGTTG GGTGAGCATTTTTAGGTTTTCATACATTAGGTTTATATATTCATAATGAT ACTGTTGTCGCATTTGGTCAGCCAGAAAAACAAATTTTAGTAGAGCCTGT TTTTGCTCAATTTATTCAAGCTGCTTCAGGAAAGGCTGTATATGGATTTG ATCTTTTATTATCTTCAAAAGAAAGTCCAGCTACTATAGCTGGTAGTGAG ATATGGTTACCTGGTTGGATAGAAGCTATTAATAATGATAAAAATGATCT TTTTTTAACTATTGGACCTGGAGATTTTTTAATACATCATGCTATTGCTT TAGGACTTCATACTACAACCTTAATTTTAGTTAAAGGAGCATTAGATGCT CGTGGCTCCAAATTAATGCCTGATAAAAAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1470:14411..15440+

>mRNA_P-littoralis_Contig1470.8.1 ID=mRNA_P-littoralis_Contig1470.8.1|Name=mRNA_P-littoralis_Contig1470.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=639bp|location=Sequence derived from alignment at P-littoralis_Contig1470:14411..15440+ (Pylaiella littoralis U1_48)
ATGACAGAAGAAAATTTATATCAGAAAATCTTTGCTTCACATTTTGGTCA
TTTAGCAATTATTTTTCTTTGGACATCAGGTAATTTATTCCATGTTGCTT
GGCAAGGTAATTTCGAACAATGGTCTTTAAACCCATTAAAAGTGAAACCT
ATTGCTCATACAATTTGGGACCCTCATTTTGGTGAACTTGCAATGAAAGC
ATTTACAAAGGGTGGTGCTTTTTATCCAGTAAATATCTCTTATTCAGGTG
TTTACCATTGGTGGTATACTATTGGAATGAGAACAAATAATGATTTATAC
ATTGGGTCTATTTTTTTAATAGCTTTATCTAGTTTATTATTATTTGCTGG
TATAACATCTTTAGTTGCTCAACATATGTATGCAATCCCACCTTACGCAT
TTATGGCAAAAGATTTCACAACACAGGCAGCTCTTTATACTCACCACCAA
TATATCGCTGGATTTTTAATGGTCGGAGCATTTGCCCATGGTGCAATCTT
CTTTGTTCGAGATTATGATCCAGAAGCAAACCAAGATAATGTTTTAGCGA
GAATGCTTGAACATAAAGAAGCGATTATTTCTCATTTAAGTTGGGTGAGC
ATTTTTAGGTTTTCATACATTAGGTTTATATATTCATAA
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