prot_P-littoralis_Contig147.59.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig147.59.2
Unique Nameprot_P-littoralis_Contig147.59.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length261
Homology
BLAST of mRNA_P-littoralis_Contig147.59.2 vs. uniprot
Match: A0A6H5JV23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV23_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 3.580e-22
Identity = 61/190 (32.11%), Postives = 99/190 (52.11%), Query Frame = 0
Query:   52 TCCCCFPLRTGVGILATLDVLAFGEWASYYSWNALKKAAEWLLETNEKIYAENCGEGTRPDSEVECKQLAEAIEQNQEAVDHLSDPTIYVVIYVLVALSMASGALGLLGVFGSHAKAARFYMWTWLPRFFAGVVVALAF---------------GATINDMTLLFRGWRLFWFIYFLKVVWSYQEVLKTR 226
            TCC C  LR GVGILA  D+L  G W ++Y+   ++K  +  +   + +Y  +C +   P    +C + +  IEQ +  V+   +  + V++YV   ++M +GA+GL  VF S+A +A+ Y+WTWLPRFF G+V                    G  IN++          + +Y++KV WS+ + LK R
Sbjct:   13 TCCFCCSLRAGVGILAANDLLHTGIWTAFYARGYVEKMLQTAIAIVQSLYDMDCKDA--PVQTEDCLKRSHEIEQMEFQVELFEN--LPVIVYVEAVIAMIAGAVGLFAVFKSNALSAKIYLWTWLPRFFVGLVARYTMRAEMKQYGIDNNNEPGVVINELV------TAIFLLYYVKVTWSFHQRLKAR 192          
BLAST of mRNA_P-littoralis_Contig147.59.2 vs. uniprot
Match: D8LNW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW6_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 1.210e-14
Identity = 74/238 (31.09%), Postives = 104/238 (43.70%), Query Frame = 0
Query:   11 THYRSVQNRAVEGEPVTTVHVVFNGGDPARTGCWWEPGPVDTCCCCFPLRTGVGILATLDVLAFGEWASYY-SWNALKKAAEWLLETNEKIYAENCGEGTRPDSEVECKQLAEAIEQNQEAVDHLSDPTIYVVIYVLVALSMASGALGLLGVFGSHAKAARFYMWTWLPRFFAGVVVALAFGATIN--DMTLLFRGWRLFWFI-------YFLKVVWSYQEVLKTRVIRASSLETAQG 238
            T Y  V +    G P+    V FNG    R   WW+PGPVD+    F L  GV +LA LD++  G    YY S+       + LL   EK YAE C +    ++  +C   A  I    +  D      +YV   +   ++   G +GL  VF   A AAR Y+W+W PR    +V  +         DM  L+ G+ + W I       Y LKV WSY  V++     A++     G
Sbjct:    9 TAYVPVGSEFDGGRPLGE-RVRFNGVGGVRKDWWWQPGPVDSXXXXFSLAAGVAVLAALDIIVLGAMRLYYVSFVTGDAGLKQLLAGFEKKYAEECEDVA--EASADCLAQASIILSLNKTND------LYVPAVLQGVIAAIFGFVGLRAVFAHDALAARAYLWSWPPRIVLTLVELVMQRIRFERYDMGFLW-GFTVVWNIPRVLILAYCLKVAWSYWVVVRRNNRAAATAADTSG 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig147.59.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JV23_9PHAE3.580e-2232.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNW6_ECTSI1.210e-1431.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig147contigP-littoralis_Contig147:399140..424560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig147.59.2mRNA_P-littoralis_Contig147.59.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig147 399044..425684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig147.59.2 ID=prot_P-littoralis_Contig147.59.2|Name=mRNA_P-littoralis_Contig147.59.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp
MDSRMSPPQMTHYRSVQNRAVEGEPVTTVHVVFNGGDPARTGCWWEPGPV
DTCCCCFPLRTGVGILATLDVLAFGEWASYYSWNALKKAAEWLLETNEKI
YAENCGEGTRPDSEVECKQLAEAIEQNQEAVDHLSDPTIYVVIYVLVALS
MASGALGLLGVFGSHAKAARFYMWTWLPRFFAGVVVALAFGATINDMTLL
FRGWRLFWFIYFLKVVWSYQEVLKTRVIRASSLETAQGAAVNVEPTSVPA
GDDGSSARLV*
back to top