prot_P-littoralis_Contig147.53.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig147.53.1
Unique Nameprot_P-littoralis_Contig147.53.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length256
Homology
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 376 bits (965), Expect = 1.130e-118
Identity = 185/246 (75.20%), Postives = 210/246 (85.37%), Query Frame = 0
Query:    2 IQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITELSDPIFRDSDDLSLGDNVRFYTRGGNDCVGEECIVEYGEETWGTTGFFLVPRRTTRGHARRWTVRLDKVHVARAKALYPDADKPRGATATAQIGDRAGSVVSWDANRLRKT 247
            IQLAAGK VVIFHVLHGQR+VP ELPD LV+LLED KLTKTGVGIKGDCT+L++ YGVEV+  VDLRSLAVERKVE+GLRRGLADLCVHLLG+ LPKD +VR+S+WN  +LS +QKRYAALDAYACLLL+ RI ELSD IFRD+++L +GD VR YTR GNDCVGE CIVE+ +ETWGTTGF+LVPRR TR  ARRW VRLD+VHV RAK LYPDA  PRG  ATAQ+  R  SV+ WDA+RLRKT
Sbjct:  275 IQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFRDAEELHVGDRVRLYTRAGNDCVGEGCIVEHTDETWGTTGFYLVPRRATRRFARRWAVRLDRVHVPRAKTLYPDATDPRGTPATAQLASRVDSVILWDASRLRKT 520          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 1.660e-63
Identity = 110/177 (62.15%), Postives = 131/177 (74.01%), Query Frame = 0
Query:   70 LAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITELSDPIFRDSDDLSLGDNVRFYTRGGNDCVGEECIVEYGEETWGTTGFFLVPRRTTRGHARRWTVRLDKVHVARAKALYPDADKPRGATATAQIGDRAGSVVSWDANRLRK 246
            +AVERKVE+  RRGLADLCV+LL + LPKD  VR+S+WN  +LS +QKR              RI ELSD IFRD++++ +GD+VR YTR GNDCVGE CIVE+ +ETWGTTG +LVPRR TRG ARRW V LD+VHV RAKALYPDA   RG  ATAQ+  R  SV+ WDA+RLRK
Sbjct:    1 MAVERKVELWFRRGLADLCVNLLEKQLPKDPIVRLSKWNKLDLSDDQKR--------------RIGELSDSIFRDAEEMHVGDSVRLYTRAGNDCVGEGCIVEHTDETWGTTGIYLVPRRATRGFARRWAVHLDRVHVPRAKALYPDATDRRGDPATAQLASRVDSVILWDASRLRK 163          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.020e-26
Identity = 87/218 (39.91%), Postives = 112/218 (51.38%), Query Frame = 0
Query:   12 IFHVLHGQRAV-PGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITELSDPIF--RDSDDLSLGDNVRFYTRGGNDCVG-----EECIVEYGEETWGTTGFFLVPRRTTR-GHARRWTVRLDKVHVARAKALYPDADKP 220
            +FH+  G R   P      L  LL D  +TK GV +KGD ++L   YGVE   +VDLRS A    V++  R  LA +    LG++L K+ SVR SRW+ AEL+Q Q  YA LDAYA ++L+  I +  DPIF    SD    G  VR YT     CVG     +E       E WGT    L  R  TR G  +R  V++  V V +  +L P  D P
Sbjct:  122 LFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDLPCR-SLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQVNYACLDAYAAVVLHAEIGKSKDPIFCMAPSDIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLVEKWGTD-LKLAQREGTRSGGLKRVVVKV--VDVLKPASLTPHQDAP 335          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A6H5K9Q9_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q9_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 4.850e-20
Identity = 63/160 (39.38%), Postives = 81/160 (50.62%), Query Frame = 0
Query:   20 RAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITELSDPIFRDSD-DLSLGDNVRFYTRGGNDCVGEECIVEYGEETW 178
            +      P  L  LLED  + K GV I  D T L   YGVEV+  VDLR+ A +  VE   R  LA +  HLLGR LPKD  VR+SRW+ A L+ +Q +YA LDAYA +L+Y                +L  G  V     G    +  E +VEY ++ W
Sbjct:   84 KTTASSFPKALQNLLEDPSIAKVGVNINSDATYLEQDYGVEVANTVDLRTCARQSWVETPCR-SLAGMTSHLLGRQLPKDPVVRLSRWS-APLADKQVQYACLDAYASVLVYQXXXXXXXXXXXXXXVELQPGTKVEQALVGKG--MTPEAVVEYKDKNW 239          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A4D6NH10_VIGUN (Werner syndrome ATP-dependent helicase n=2 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6NH10_VIGUN)

HSP 1 Score: 92.0 bits (227), Expect = 5.430e-19
Identity = 52/124 (41.94%), Postives = 74/124 (59.68%), Query Frame = 0
Query:    2 IQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAY 125
            +QL  G   +IFH+++ +      +P  LV  L+D  +T  GVGI+ D  KL   YG+ V  V DLRSLA ER+V   +  GL  LC+H+LG  + K  SV  S W+  +L+ EQ +YAA+DA+
Sbjct:   83 LQLCVGHACLIFHIINSRF-----IPRSLVSFLQDPNVTFLGVGIRADADKLLEDYGLNVVNVCDLRSLA-ERRVPHLMHAGLKMLCLHVLGVEVEKPQSVTRSLWDNPQLTPEQVKYAAIDAF 200          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A6P6Q611_CARAU (DNA helicase n=7 Tax=Cyprininae TaxID=2743694 RepID=A0A6P6Q611_CARAU)

HSP 1 Score: 89.7 bits (221), Expect = 1.200e-16
Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 0
Query:   27 PDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITELS 138
            P  L  LLED+ + K GVGI+GD  KL + Y +++  +V+L  LA E  +  G +  L  L  HLL + L KD  VR S W+  +L+++QKRYAA DAYA LL+Y  + EL+
Sbjct:  108 PPGLKMLLEDENIKKVGVGIEGDKWKLLSDYDIKLKSIVELSDLANET-LRCGEKWSLDGLVKHLLKKQLFKDKHVRCSHWDDYDLTEDQKRYAATDAYAGLLIYQSLQELT 218          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A401SI95_CHIPU (DNA helicase n=2 Tax=Chiloscyllium TaxID=34767 RepID=A0A401SI95_CHIPU)

HSP 1 Score: 89.4 bits (220), Expect = 1.650e-16
Identity = 58/138 (42.03%), Postives = 80/138 (57.97%), Query Frame = 0
Query:    1 MIQLAAG-KVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITEL 137
            +IQL A  K   +FH+     ++ G  P  L  LLED+ + K GVGI GD  KL   Y V++   V+L  +A  +K++   R  L  L  HL G+ L KD+SVR S W+   LS EQ+RYAA DAYA  L+Y+++  L
Sbjct:  140 LIQLCASEKKCYLFHI----SSMSG-FPSGLKRLLEDEAIKKVGVGIDGDHWKLMRDYDVKLKGFVELTDMA-NQKLKCAERWSLNGLVQHLCGKQLWKDASVRCSDWDMFPLSDEQQRYAATDAYAGFLIYEKLNTL 271          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A8M9Q6A5_DANRE (Werner syndrome ATP-dependent helicase n=2 Tax=Danio rerio TaxID=7955 RepID=A0A8M9Q6A5_DANRE)

HSP 1 Score: 89.0 bits (219), Expect = 2.200e-16
Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 0
Query:    1 MIQLAAGK-VVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITEL 137
            M+QL A +    +FH+       PG     L   LED+ + K GVGI+GD  KL + Y +++  +VDL  LA E K+    +  L  L  HLL + L KD  VR S W+   L+++QKRYAA DAYA LL+Y ++ E+
Sbjct:   87 MVQLCASEDKCYLFHISSMSGFPPG-----LKMFLEDENIMKVGVGIEGDKWKLLSDYDIKLKNIVDLSDLANE-KLRCCEKWSLDGLVKHLLKKQLFKDKLVRCSHWDDFSLTEDQKRYAATDAYAGLLIYQKLQEM 218          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: A0A8M3AV58_DANRE (Werner syndrome ATP-dependent helicase n=1 Tax=Danio rerio TaxID=7955 RepID=A0A8M3AV58_DANRE)

HSP 1 Score: 89.0 bits (219), Expect = 2.200e-16
Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 0
Query:    1 MIQLAAGK-VVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITEL 137
            M+QL A +    +FH+       PG     L   LED+ + K GVGI+GD  KL + Y +++  +VDL  LA E K+    +  L  L  HLL + L KD  VR S W+   L+++QKRYAA DAYA LL+Y ++ E+
Sbjct:   87 MVQLCASEDKCYLFHISSMSGFPPG-----LKMFLEDENIMKVGVGIEGDKWKLLSDYDIKLKNIVDLSDLANE-KLRCCEKWSLDGLVKHLLKKQLFKDKLVRCSHWDDFSLTEDQKRYAATDAYAGLLIYQKLQEM 218          
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Match: UPI0014038EB3 (Werner syndrome ATP-dependent helicase isoform X1 n=5 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014038EB3)

HSP 1 Score: 89.0 bits (219), Expect = 2.210e-16
Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 0
Query:   27 PDELVELLEDDKLTKTGVGIKGDCTKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDSSVRISRWNTAELSQEQKRYAALDAYACLLLYDRITELS---DPIFRDSDDLSL 150
            P  L  LLED+ + K GVGI+GD  KL   Y +++   V+L  +A  +K     +  L  L  HL G+ L KD++VR S W+T  LS EQ++YAA+DAYA LL+Y +++ L       F++ DD  L
Sbjct:  115 PSGLKRLLEDEAIKKVGVGIEGDHWKLMRDYDIKLKGFVELSEVA-NKKFNYAEKWSLNGLVKHLYGKQLWKDTAVRCSDWDTFPLSNEQQQYAAVDAYAGLLIYQKLSSLDLNRGKQFQNKDDQKL 240          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig147.53.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE1.130e-11875.203'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KEU8_9PHAE1.660e-6362.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRJ6_9PHAE1.020e-2639.913'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K9Q9_9PHAE4.850e-2039.383'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A4D6NH10_VIGUN5.430e-1941.94Werner syndrome ATP-dependent helicase n=2 Tax=Vig... [more]
A0A6P6Q611_CARAU1.200e-1644.64DNA helicase n=7 Tax=Cyprininae TaxID=2743694 RepI... [more]
A0A401SI95_CHIPU1.650e-1642.03DNA helicase n=2 Tax=Chiloscyllium TaxID=34767 Rep... [more]
A0A8M9Q6A5_DANRE2.200e-1640.58Werner syndrome ATP-dependent helicase n=2 Tax=Dan... [more]
A0A8M3AV58_DANRE2.200e-1640.58Werner syndrome ATP-dependent helicase n=1 Tax=Dan... [more]
UPI0014038EB32.210e-1640.94Werner syndrome ATP-dependent helicase isoform X1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..136
e-value: 3.0E-39
score: 136.6
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 2..136
e-value: 8.3E-17
score: 61.5
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 2..136
NoneNo IPR availableCDDcd06141WRN_exocoord: 2..134
e-value: 4.93974E-46
score: 149.651
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig147contigP-littoralis_Contig147:346349..347379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig147.53.1mRNA_P-littoralis_Contig147.53.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig147 345149..347379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig147.53.1 ID=prot_P-littoralis_Contig147.53.1|Name=mRNA_P-littoralis_Contig147.53.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=256bp
MIQLAAGKVVVIFHVLHGQRAVPGELPDELVELLEDDKLTKTGVGIKGDC
TKLSNSYGVEVSRVVDLRSLAVERKVEVGLRRGLADLCVHLLGRTLPKDS
SVRISRWNTAELSQEQKRYAALDAYACLLLYDRITELSDPIFRDSDDLSL
GDNVRFYTRGGNDCVGEECIVEYGEETWGTTGFFLVPRRTTRGHARRWTV
RLDKVHVARAKALYPDADKPRGATATAQIGDRAGSVVSWDANRLRKTSTS
AAATTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf