prot_P-littoralis_Contig146.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig146.19.1
Unique Nameprot_P-littoralis_Contig146.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length103
Homology
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BLAST of mRNA_P-littoralis_Contig146.19.1 vs. uniprot
Match: Q8QNC6_ESV1K (EsV-1-156 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC6_ESV1K)

HSP 1 Score: 114 bits (285), Expect = 1.180e-28
Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 0 
Query:    1 SRLKKVATRSR-PSVWCELSQLQARRLILKVGLGRDLVPRDLPTAKTPNRLYETLTSMLKAACVKRLEVTKFISEGLFGHVFRALRNDGTRAVIKV 95
            ++ KK A R + P VWC+LSQ++ARRLILKV LGRD+ P D+ TAK PNRL ETLT ML  +C++   VTKF+S G +GHVFRA+  +GT A +KV
Sbjct:    2 AKAKKAAPRPKQPKVWCDLSQIEARRLILKVALGRDIGPGDVATAKNPNRLCETLTKMLACSCMRGWRVTKFLSAGAYGHVFRAVHTNGTSAALKV 97
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig146.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNC6_ESV1K1.180e-2858.33EsV-1-156 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig146contigP-littoralis_Contig146:69250..69558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig146.19.1mRNA_P-littoralis_Contig146.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig146 68760..69558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig146.19.1 ID=prot_P-littoralis_Contig146.19.1|Name=mRNA_P-littoralis_Contig146.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp
SRLKKVATRSRPSVWCELSQLQARRLILKVGLGRDLVPRDLPTAKTPNRL
YETLTSMLKAACVKRLEVTKFISEGLFGHVFRALRNDGTRAVIKVRLVPR
RK*
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