mRNA_P-littoralis_Contig1438.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1438.1.1
Unique NamemRNA_P-littoralis_Contig1438.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: A0A2D7VRH3_9FLAO (Class I SAM-dependent methyltransferase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D7VRH3_9FLAO)

HSP 1 Score: 350 bits (899), Expect = 1.360e-121
Identity = 174/181 (96.13%), Postives = 176/181 (97.24%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   KGRYQKNQTILDAGCGKGRNLKW YQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK
Sbjct:   16 YVIDQI-LKGRYQKNQTILDAGCGKGRNLKWFYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 195          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: A0A7C1S964_9FLAO (Class I SAM-dependent methyltransferase n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A7C1S964_9FLAO)

HSP 1 Score: 291 bits (745), Expect = 4.230e-98
Identity = 138/181 (76.24%), Postives = 158/181 (87.29%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   KGRYQ  Q+ILDAGCGKGRNLKW Y+NDFE+FGID D+EFL+NAK N+P  A +FT+GTLD LP+    F+HILCCAVLHFA+SE HFT MFSEL+RVLKP+G+LL+RMASNIGLDGNAPEI YKENGQKGTYYLTRERI Q++ EF LTLLEP+KTTNVQDERAMTTLVLQK
Sbjct:   16 YVIDQI-LKGRYQNGQSILDAGCGKGRNLKWFYKNDFEIFGIDADSEFLSNAKQNFPEAASNFTVGTLDNLPYGENSFNHILCCAVLHFAESETHFTVMFSELIRVLKPDGMLLIRMASNIGLDGNAPEIRYKENGQKGTYYLTRERINQLIPEFNLTLLEPLKTTNVQDERAMTTLVLQK 195          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: A3XIY3_LEEBM (S-adenosylmethionine-dependent methyltransferase n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A3XIY3_LEEBM)

HSP 1 Score: 282 bits (722), Expect = 1.340e-94
Identity = 134/181 (74.03%), Postives = 157/181 (86.74%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   KGRYQ+ Q+ILDAGCGKGRNLKW YQNDFE++GID D +FLA AK  YP   ++F++G+LD+LP+D   FDHILCCAVLHFAQS+  FTAMFSEL+RVLKPNG LL+RMASNIGLDGNAPEITYKENGQKGTYYLTRERI+ ++KEF + L+EPVKTTNVQDERAMTTLV +K
Sbjct:   16 YVIDQI-LKGRYQEGQSILDAGCGKGRNLKWSYQNDFELYGIDKDVDFLAFAKAEYPEYGKNFSVGSLDKLPYDQNSFDHILCCAVLHFAQSQTQFTAMFSELVRVLKPNGSLLIRMASNIGLDGNAPEITYKENGQKGTYYLTRERIENLLKEFTVELIEPVKTTNVQDERAMTTLVFKK 195          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: I3C1Y2_9FLAO (Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Joostella marina DSM 19592 TaxID=926559 RepID=I3C1Y2_9FLAO)

HSP 1 Score: 275 bits (702), Expect = 1.490e-91
Identity = 129/181 (71.27%), Postives = 154/181 (85.08%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   KGRY   Q+ILDAGCGKGRNLKW Y+NDFE+FGID D+EFLANAK NYP  A +F +GTLD+LP+  + FDHILCCAVLHFAQSE HFTAMFSEL+RVLKP+G+LL+RMASNIGLDGNA +I +K+NG+KG YYLTRERI  ++ EF + L+EP+KTTNV+DERAMTTLV QK
Sbjct:   16 YVIDQI-LKGRYLNGQSILDAGCGKGRNLKWFYKNDFEIFGIDADSEFLANAKQNYPKAASNFRVGTLDKLPYGEKSFDHILCCAVLHFAQSETHFTAMFSELIRVLKPDGMLLIRMASNIGLDGNALKIIFKDNGKKGNYYLTRERITDLITEFNIDLIEPIKTTNVKDERAMTTLVFQK 195          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: A0A2S9WR12_9FLAO (SAM-dependent methyltransferase n=1 Tax=Nonlabens agnitus TaxID=870484 RepID=A0A2S9WR12_9FLAO)

HSP 1 Score: 260 bits (664), Expect = 1.110e-85
Identity = 122/181 (67.40%), Postives = 146/181 (80.66%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   KGRY    +ILDAGCG+GRNLKW Y ND +++GID D   LA AK  YP  A++F +G L++LP+    FDHI+CCAVLHFAQSEA FTAMF EL+RVLKPNG LL+RMASNIGLDGNAP++ YKENGQKGTYYLTRERI  +V+EF + L+EP+KTTNVQDERAMTTLV +K
Sbjct:   16 YIIDQI-LKGRYTNRPSILDAGCGRGRNLKWFYANDLDIYGIDTDENVLAFAKAEYPKSAKNFNVGNLEKLPYHNNNFDHIICCAVLHFAQSEAQFTAMFDELVRVLKPNGSLLIRMASNIGLDGNAPKLMYKENGQKGTYYLTRERIDNLVQEFDIELIEPIKTTNVQDERAMTTLVFKK 195          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: A0A090PKE8_NONUL (Methyltransf_11 domain-containing protein n=1 Tax=Nonlabens ulvanivorans TaxID=906888 RepID=A0A090PKE8_NONUL)

HSP 1 Score: 252 bits (643), Expect = 1.320e-82
Identity = 121/181 (66.85%), Postives = 145/181 (80.11%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   K RY  NQ+ILDAGCGKGRNLKW Y N F+++G D+D++FLA AK  YP   +HF  GTLD LPF    FDHI+CCAVLHFA SE  FTAMF+EL+RVLK +G LL+RMASNIGLDGNAP + +K+NG KGTYYLTR+RI+Q++ EF + LLEPVKTTNVQDERAMTTL+L K
Sbjct:   16 YIIDQI-LKNRYLSNQSILDAGCGKGRNLKWFYHNGFKIYGNDIDSDFLAFAKAKYPKSEDHFINGTLDNLPFRDSSFDHIICCAVLHFANSEKQFTAMFAELIRVLKSDGTLLIRMASNIGLDGNAPIVRFKDNGVKGTYYLTRDRIEQLLVEFNVRLLEPVKTTNVQDERAMTTLMLTK 195          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: A0A081DC38_NONUL (Methyltransf_11 domain-containing protein n=4 Tax=Nonlabens TaxID=363408 RepID=A0A081DC38_NONUL)

HSP 1 Score: 251 bits (641), Expect = 2.670e-82
Identity = 121/181 (66.85%), Postives = 142/181 (78.45%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   K RY   Q+ILDAGCGKGRNLKW Y NDFE++G D+D++FLA AK  YP    +F    LD+LP+    FDH+LCCAVLHFA+SE  FT MF EL+RVLKP G LL+RMASNIGLDGNAP + +K+NGQKGTYYLTRERI  ++ EF+L LLEPVKTTNVQDERAMTTLVL K
Sbjct:   16 YIIDQI-LKNRYHPQQSILDAGCGKGRNLKWFYDNDFEIYGNDVDSDFLAFAKAKYPKSKANFINSNLDELPYKDSSFDHVLCCAVLHFAKSEKQFTEMFKELIRVLKPGGTLLIRMASNIGLDGNAPIVRFKDNGQKGTYYLTRERIALLLSEFQLELLEPVKTTNVQDERAMTTLVLSK 195          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: Q26BE8_FLABB (Putative methyltransferase n=1 Tax=Flavobacteria bacterium (strain BBFL7) TaxID=156586 RepID=Q26BE8_FLABB)

HSP 1 Score: 249 bits (636), Expect = 1.880e-81
Identity = 120/181 (66.30%), Postives = 144/181 (79.56%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   K R   N +ILDAGCGKGRNLKW Y NDFE++G D+D +FLA AK  YP +  +FT+  L +LP+    FDHI+CCAVLHFAQSE HFT MFSEL+RVLKP+G LL+RMASNIGLDGNAP + YKENGQ+GTYYLTR+RI  ++ EF+L LLEP+KTTNVQDERAMTTL+  K
Sbjct:   22 YVIDQI-LKNRCLLNHSILDAGCGKGRNLKWFYHNDFEIYGTDIDDDFLAFAKARYPKRQSNFTLSRLKKLPYVDCCFDHIICCAVLHFAQSEKHFTEMFSELVRVLKPDGTLLIRMASNIGLDGNAPVVRYKENGQRGTYYLTRDRITLLMSEFQLQLLEPIKTTNVQDERAMTTLLFSK 201          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: A0A090PSC1_NONUL (Methyltransf_11 domain-containing protein n=2 Tax=Nonlabens TaxID=363408 RepID=A0A090PSC1_NONUL)

HSP 1 Score: 244 bits (624), Expect = 1.030e-79
Identity = 117/181 (64.64%), Postives = 145/181 (80.11%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   K RY  NQ+ILDAGCGKGRNLKW Y+N+F ++G D+D++FLA AK  YP    +F   +LD+LP+    FDHI+CCAVLHFA SE  FTAMF+EL+RVLK +G LL+RMASNIGLDGNAP + +K+NG KGTYYLTR+RI+Q++ EF + LLEPVKTTNVQDERAMTTL+L K
Sbjct:   16 YIIDQI-LKNRYLSNQSILDAGCGKGRNLKWFYENEFAIYGNDVDSDFLAFAKAKYPKSKANFINSSLDELPYMDSSFDHIICCAVLHFANSEKQFTAMFAELIRVLKSDGTLLIRMASNIGLDGNAPIVRFKDNGVKGTYYLTRDRIEQLLVEFNVRLLEPVKTTNVQDERAMTTLMLTK 195          
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Match: A3XQP9_LEEBM (Ubiquinone/menaquinone biosynthesis methyltransferase n=2 Tax=Leeuwenhoekiella TaxID=283735 RepID=A3XQP9_LEEBM)

HSP 1 Score: 239 bits (609), Expect = 2.100e-77
Identity = 116/181 (64.09%), Postives = 142/181 (78.45%), Query Frame = 3
Query:   42 YLCDRPNFKGRYQKNQTILDAGCGKGRNLKWLYQNDFEVFGIDMDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSEAHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYLTRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK 584
            Y+ D+   K RY   Q ILDAGC +GRNL W YQN+FE+ GID+D++F+A AK  YP+ A  F I  LD LP+    FDHILCCAVLHFA+ E  FTAMFSEL+RVLKP G LL+RMAS+IGLDGNAP I YK  GQKGTYYLTR+RI ++++EF + LLEPVK+TNVQDER+MTTL+++K
Sbjct:   16 YVIDQI-LKQRYLAGQHILDAGCARGRNLNWFYQNNFEIAGIDIDSDFIAEAKERYPNSASAFQIENLDALPYADASFDHILCCAVLHFAEDENQFTAMFSELIRVLKPEGSLLIRMASDIGLDGNAPVIKYKVTGQKGTYYLTRDRISKLLEEFPIELLEPVKSTNVQDERSMTTLLIRK 195          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1438.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7VRH3_9FLAO1.360e-12196.13Class I SAM-dependent methyltransferase n=1 Tax=Fl... [more]
A0A7C1S964_9FLAO4.230e-9876.24Class I SAM-dependent methyltransferase n=2 Tax=Fl... [more]
A3XIY3_LEEBM1.340e-9474.03S-adenosylmethionine-dependent methyltransferase n... [more]
I3C1Y2_9FLAO1.490e-9171.27Methylase involved in ubiquinone/menaquinone biosy... [more]
A0A2S9WR12_9FLAO1.110e-8567.40SAM-dependent methyltransferase n=1 Tax=Nonlabens ... [more]
A0A090PKE8_NONUL1.320e-8266.85Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A081DC38_NONUL2.670e-8266.85Methyltransf_11 domain-containing protein n=4 Tax=... [more]
Q26BE8_FLABB1.880e-8166.30Putative methyltransferase n=1 Tax=Flavobacteria b... [more]
A0A090PSC1_NONUL1.030e-7964.64Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A3XQP9_LEEBM2.100e-7764.09Ubiquinone/menaquinone biosynthesis methyltransfer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1438contigP-littoralis_Contig1438:333..919 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog398720.MED217_05642
PFAMsMethyltransf_11
Model size587
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.46e-69
EggNOG OGsCOG0500@1|root,COG0500@2|Bacteria,4NFUU@976|Bacteroidetes,1I0M8@117743|Flavobacteriia
DescriptionMethyltransferase domain
Cds size417
COG categoryQ
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789676.3894086-UTR-P-littoralis_Contig1438:332..5021680789676.3894086-UTR-P-littoralis_Contig1438:332..502Pylaiella littoralis U1_48UTRP-littoralis_Contig1438 333..502 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789676.4030309-CDS-P-littoralis_Contig1438:502..9191680789676.4030309-CDS-P-littoralis_Contig1438:502..919Pylaiella littoralis U1_48CDSP-littoralis_Contig1438 503..919 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1438.1.1prot_P-littoralis_Contig1438.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1438 503..919 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1438.1.1

>prot_P-littoralis_Contig1438.1.1 ID=prot_P-littoralis_Contig1438.1.1|Name=mRNA_P-littoralis_Contig1438.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp
MDAEFLANAKTNYPSQAEHFTIGTLDQLPFDARRFDHILCCAVLHFAQSE
AHFTAMFSELMRVLKPNGILLVRMASNIGLDGNAPEITYKENGQKGTYYL
TRERIQQVVKEFKLTLLEPVKTTNVQDERAMTTLVLQK*
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mRNA from alignment at P-littoralis_Contig1438:333..919+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1438.1.1 ID=mRNA_P-littoralis_Contig1438.1.1|Name=mRNA_P-littoralis_Contig1438.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=587bp|location=Sequence derived from alignment at P-littoralis_Contig1438:333..919+ (Pylaiella littoralis U1_48)
ATGAATTTTGAAACCACATATGATGCACTAGGGAACGTTGATATTTATGT GATCGACCAAATTTTAAAGGGCGTTACCAAAAGAATCAAACCATATTAGA TGCTGGTTGCGGCAAAGGCCGGAACTTAAAATGGTTGTATCAAAATGACT TTGAGGTCTTTGGAATTGATATGGATGCTGAATTCTTAGCCAATGCGAAA ACGAACTATCCGAGTCAAGCAGAACATTTTACAATTGGTACCCTAGACCA ACTACCGTTTGACGCACGTCGTTTTGACCACATTCTCTGCTGTGCTGTAT TGCATTTTGCACAAAGTGAAGCACATTTTACAGCAATGTTTTCAGAATTG ATGCGGGTACTGAAGCCAAATGGAATCTTGCTTGTAAGAATGGCTTCAAA TATTGGGTTAGACGGAAATGCTCCTGAGATTACTTATAAAGAAAATGGAC AGAAAGGCACCTATTATCTAACCAGAGAACGTATTCAACAAGTTGTGAAA GAGTTTAAGCTTACACTTCTCGAACCGGTAAAAACCACTAACGTTCAGGA TGAACGGGCCATGACTACCTTAGTGTTGCAGAAATAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1438:333..919+

>mRNA_P-littoralis_Contig1438.1.1 ID=mRNA_P-littoralis_Contig1438.1.1|Name=mRNA_P-littoralis_Contig1438.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=417bp|location=Sequence derived from alignment at P-littoralis_Contig1438:333..919+ (Pylaiella littoralis U1_48)
ATGGATGCTGAATTCTTAGCCAATGCGAAAACGAACTATCCGAGTCAAGC
AGAACATTTTACAATTGGTACCCTAGACCAACTACCGTTTGACGCACGTC
GTTTTGACCACATTCTCTGCTGTGCTGTATTGCATTTTGCACAAAGTGAA
GCACATTTTACAGCAATGTTTTCAGAATTGATGCGGGTACTGAAGCCAAA
TGGAATCTTGCTTGTAAGAATGGCTTCAAATATTGGGTTAGACGGAAATG
CTCCTGAGATTACTTATAAAGAAAATGGACAGAAAGGCACCTATTATCTA
ACCAGAGAACGTATTCAACAAGTTGTGAAAGAGTTTAAGCTTACACTTCT
CGAACCGGTAAAAACCACTAACGTTCAGGATGAACGGGCCATGACTACCT
TAGTGTTGCAGAAATAA
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