prot_P-littoralis_Contig101.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig101.12.1
Unique Nameprot_P-littoralis_Contig101.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length438
Homology
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: D8LR58_ECTSI (Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR58_ECTSI)

HSP 1 Score: 735 bits (1897), Expect = 3.280e-265
Identity = 385/412 (93.45%), Postives = 394/412 (95.63%), Query Frame = 0
Query:   29 ATAGAKVETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGG--APALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQ 438
            A+A AKVETRTWVLQAETELRFDVSAEHTLTVVL+ENTAEMFGIELAAEYEYKFSS+KAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTN+TGPRVMVVGEADSGKSTL NILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLV FYGHT+LQENPELFKKLV RMAECLKRRVANDIDASASGAIFNTCGWVEGLGL+LLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGV LRS  +RRASRDRRCREYFY XXXX        APALSPAALHL+FNDVSIFRVGGQ VSDAMLPVGHSD+SLGPLQVNP YPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQ
Sbjct:    2 ASAAAKVETRTWVLQAETELRFDVSAEHTLTVVLRENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRVANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVALRSSQYRRASRDRRCREYFYXXXXXXXXXXXXXAPALSPAALHLDFNDVSIFRVGGQTVSDAMLPVGHSDSSLGPLQVNPFYPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQ 413          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: A0A6H5KLD2_9PHAE (Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD2_9PHAE)

HSP 1 Score: 736 bits (1901), Expect = 4.390e-254
Identity = 386/412 (93.69%), Postives = 395/412 (95.87%), Query Frame = 0
Query:   29 ATAGAKVETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGG--APALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQ 438
            A+A AKVETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSS+KAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTN+TGPRVMVVGEADSGKSTL NILAAYAVRLGRCPTFVDLDVGQGMI VPGGIAAAALDSNSMSVEEGFSLTAPLV FYGHT+LQENPELFKKLV RMAECLKRR+ANDIDASASGAIFNTCGWVEGLGL+LLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGV LRS  +RRASRDRRCREYFYGXXXX        APALSPAALHL+FNDVSIFRVGGQ VSDAMLPVGHSD+SLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQ
Sbjct:    2 ASATAKVETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMIAVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRMANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVALRSSQYRRASRDRRCREYFYGXXXXXXXXXXXXAPALSPAALHLDFNDVSIFRVGGQTVSDAMLPVGHSDSSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQ 413          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: A0A835YJV7_9STRA (Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV7_9STRA)

HSP 1 Score: 412 bits (1060), Expect = 4.240e-138
Identity = 225/413 (54.48%), Postives = 284/413 (68.77%), Query Frame = 0
Query:   29 ATAGAKVETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSS-SKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVA---TLPRSV---AVINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGGAPALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSA 434
            ++A    + + W L+ E+ELRF+V  + + TVVL E +AE+FG+ELA   EY FS+ +K AVFTWYGC ++TT     +YVA++TPM SYVNTH QLEARRD+AL  L  G   V GPRV+V G  DSGKS+L  +L AYAVRLGR PTFVDLDVGQG IT+PG ++A +LDS ++S+EE  SL APL FFYGH +  ENPELF+ +V R+AEC+++R AND DA+A+G + NTCGWV+GLGL+LL H I  L ID+VLVM HD+LYA+++A    LP       V+ LP SGGVV RS   RR  R  R REYFYG          +PAL+P  L L  + V + RVGG  +S  +LPVG +   LGP +V+ + PS DLLH VLAVCHPVL+ DGT L    G EG  D A
Sbjct:    4 SSAAEGEDKKIWTLEKESELRFEVGPDKSFTVVLLEQSAEIFGVELAVNTEYHFSAGAKVAVFTWYGCKLQTTRTAEVLYVAKDTPMLSYVNTHIQLEARRDQALSKLSKGEKAV-GPRVLVAGATDSGKSSLCAVLCAYAVRLGRTPTFVDLDVGQGEITIPGTVSAVSLDSGTLSIEERLSLAAPLTFFYGHDSPGENPELFRHMVSRLAECVEQRQANDRDAAAAGTVVNTCGWVDGLGLELLRHCIDALSIDIVLVMGHDKLYAELMADSEALPDDAPPRTVVKLPTSGGVVQRSAQQRRQGRAARVREYFYGAPHAERRA--SPALTPTLLELRMDSVRVCRVGGTQLSGGLLPVGQA-ALLGPTRVSMVKPSHDLLHAVLAVCHPVLKPDGTAL--VPGEEGGLDDA 410          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: A0A2D4BR80_PYTIN (Protein CLP1 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR80_PYTIN)

HSP 1 Score: 321 bits (822), Expect = 1.580e-102
Identity = 177/382 (46.34%), Postives = 241/382 (63.09%), Query Frame = 0
Query:   41 VLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLPRSV-----AVINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGGAPALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQD 417
            VL  E E R +V A   L V L   +AE+FG+ELA   EY     KAA+FTWYG T++ TG     Y ++ETPM SY+N HAQL+ RR+ A+    AG      PRV++ G  DSGKSTLT IL  YA+RLG  PT VDLDVGQ  ++VPG +AA  LD N +SVEEG+ LT PLV+F+GHT++ EN E F+  +++++  +KRR+A D++A+ASG I NTCGWV+GLG  LL  ++   D DVVLV+  DRL++ + ++L + V     +++ L RSGGVV  +  +R A R  R REYFYG       +   P LSP      ++++  + +    VS  MLPVG + + +G L V+ L  S +LLH+V AV HP  RQD
Sbjct:    5 VLGREGEYRVEVGASTELKVKLVSGSAELFGVELAINNEYTLRDQKAAIFTWYGATLQVTGTPEVAYTSEETPMNSYINIHAQLQKRRELAMLKGSAG------PRVLIAGPVDSGKSTLTQILLNYALRLGEKPTHVDLDVGQNSLSVPGSLAATPLDMNCLSVEEGYVLTNPLVYFFGHTSMSENVEHFRSHLQQLSRAVKRRLAEDVEANASGCIINTCGWVDGLGYDLLVESVRAFDADVVLVIGQDRLFSRLQSSLAQQVTSKNLSIVKLVRSGGVVPLNSKYRSAXRQSRIREYFYGSHSLQRPI---PLLSPCINEYSWDELEFYAIKDMKVSAGMLPVGQTASDMGGLFVSKLDKSMELLHSVAAVVHP-RRQD 376          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: K3W9W5_GLOUD (Protein CLP1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9W5_GLOUD)

HSP 1 Score: 320 bits (820), Expect = 3.060e-102
Identity = 178/382 (46.60%), Postives = 241/382 (63.09%), Query Frame = 0
Query:   41 VLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLP-----RSVAVINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGGAPALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQD 417
            VL  E E R ++ A+    + LK  +AE+FG+ELA ++EY     K AVFTWYGCT+E  G     Y ++ETPM SY+N HAQL+ RR+  L A++      +GPRV+V G  DSGKSTLT IL  YA+RLG  PT V+LDVG G ++VPG IAA+ LD NS+SVEE F LT PL +F+GH    +NPELF   + ++A  ++RR+ ND + +ASG I NT GWV+GLG  LL  +I V +IDVVLV+  DRL++ + ++       +S++++ L RSGGVV  +  HR A R  R REYFYG    + AV   P  SP    + F+DV  F +    VSD MLPVG ++  L  L+V  +  + +LL ++ AV HP   QD
Sbjct:    7 VLARECEYRVEIGAQSEFKIKLKSGSAELFGVELAIDHEYTLRDKKVAVFTWYGCTLEVQGERDVAYSSEETPMNSYLNIHAQLQRRRE--LAAVKRS----SGPRVLVAGPVDSGKSTLTQILTNYALRLGEKPTLVELDVGVGSLSVPGTIAASPLDMNSISVEEEFVLTNPLAYFFGHAAQSDNPELFHHQMRQLASAVQRRMDNDAEVNASGCIINTSGWVDGLGYDLLVESIQVFEIDVVLVIGQDRLFSRLQSSFASSGASQSLSIVKLARSGGVVPLNSKHRSAKRLGRIREYFYGPNSLSLAV---PTHSPCITEISFDDVDFFAIKDMKVSDVMLPVGQTEDKLDRLRVVKVEKTQELLLSIAAVAHPKRSQD 379          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: H3GV05_PHYRM (Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=H3GV05_PHYRM)

HSP 1 Score: 320 bits (819), Expect = 4.750e-102
Identity = 178/385 (46.23%), Postives = 242/385 (62.86%), Query Frame = 0
Query:   41 VLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVA------VINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGGAPALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGT 419
            VL  E E R +V  +  + V LK  +AE+FG+ELA + EY F   K A+FTWYGCT+E  G     Y +++T M SY+N HAQL+ RR+ A         +  GPRV+V G  DSGKSTLT+ILA YA+RLG  PT V+LDVG G ++VPG ++A+ LD NS+S+EE F LT PL FFYGH    EN ELF+   +++A+ +KRR+AND + +ASG + NTCGWV+G+G  LL HAI   ++DVVLV+  DRL++ + ++L  + A      ++ L RSGGVV  +   R A+R    REYFYG    + A+     LSP      F+DVS + +    VSD MLPVG  +T    L+V P+  ++DL H++ AV HP   QD T
Sbjct:    8 VLAREGEYRVEVPPQTEVGVRLKSGSAELFGVELAIDREYTFRDRKLAIFTWYGCTLEVRGAPEVAYTSEDTTMDSYLNIHAQLQRRRELAKAK------HAAGPRVLVCGPVDSGKSTLTHILANYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSIEEDFILTNPLAFFYGHAAASENVELFRYQQQQLAKAVKRRLANDEEVNASGCVINTCGWVDGMGFDLLLHAIKEFEVDVVLVIGQDRLFSRLQSSLTGANANGVDRSIVKLSRSGGVVPLNSKLRSAARISCIREYFYGAHSLSVAIS---TLSPCINEFSFDDVSFYMIKDMKVSDVMLPVGQVETQSDRLRVVPVEKTADLGHSLAAVAHPQHGQDAT 383          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: A0A3R7G6W1_9STRA (Protein CLP1 homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6W1_9STRA)

HSP 1 Score: 318 bits (816), Expect = 1.300e-101
Identity = 180/385 (46.75%), Postives = 241/385 (62.60%), Query Frame = 0
Query:   41 VLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVA------VINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGGAPALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGT 419
            VL  E E R +V  ++ + + LK  +AE+FG+ELA + EY F   K A+FTWYGCT+E  G     Y ++ETPM SY+N HAQL+ RR+ A     AG      PRV+V G  DSGKSTLT IL  YA+RLG  PT V+LDVG G I+VPG ++A+ LD NS+SVEE F LT PL FFYGHT   EN ELF+   +++A+ +KRR+ ND + +A+G + NTCGWV+G+G  LL HAI   ++DVVLV+  DRLY+ + + L  + A      ++ L RSGGVV  S   R A+R    REYFYG    +  +   P LSP      F+DVS + +    VSD MLPVG  +T    L+V P+  ++DL H++ AV +P   QD +
Sbjct:    7 VLAREGEYRVEVPPQNEVGIRLKSGSAELFGVELAIDREYVFRDRKLAIFTWYGCTLEVRGAPEVAYTSEETPMDSYLNIHAQLQRRRELAKAKHGAG------PRVLVCGPVDSGKSTLTQILINYALRLGEKPTLVELDVGHGCISVPGTLSASPLDMNSLSVEEEFILTNPLAFFYGHTAPSENVELFRYQQQQLAKVVKRRLTNDEEVNAAGCVVNTCGWVDGVGFDLLVHAIKEFELDVVLVIGQDRLYSRLQSALTGANAGGVERSILKLSRSGGVVPLSTKLRSAARISCIREYFYGAHSLSVTI---PTLSPCINEFSFDDVSFYAIKDMKVSDVMLPVGQVETQTDRLRVVPVEKTADLGHSLAAVAYPRHGQDAS 382          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: A0A6A4FNY2_9STRA (Protein CLP1 homolog n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4FNY2_9STRA)

HSP 1 Score: 317 bits (813), Expect = 4.020e-101
Identity = 181/395 (45.82%), Postives = 241/395 (61.01%), Query Frame = 0
Query:   33 AKVETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVA------VINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGGAPALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHPVLRQDGTML 421
            A+  T   VL  E E R +V  +  + V LK  +AE+FG+ELA +  Y F   K A+FTWYGCT+E  G     Y ++ETPM SY+N HAQL+ RR+ A     AG      PRV+V G ADSGKSTL  IL  YA+RLG  PT V+LDVG G ++VPG +AA+ LD N++S+EE F LT PL +FYGH    EN ELF+   +++A  +KRR+AND + +A+G + NTCGWV+G G  LL  AI   D+DVVLV+  DRLY+ + + L  + A      ++ L RSGGVV  +   R A+R    REYFYG    + A+   P LSP      F+DVS + +    VSD MLPVG  +T    L+V P+  ++DL H++ AV HP   QD + L
Sbjct:    2 AETTTTEVVLAREAEYRVEVPPQTEVGVRLKSGSAELFGVELAIDRSYVFHDRKLAIFTWYGCTLEVRGAPEVAYTSEETPMDSYLNIHAQLQRRRELARAKRAAG------PRVLVCGPADSGKSTLAQILVNYALRLGEKPTLVELDVGHGCLSVPGTLAASPLDMNALSIEEDFVLTNPLAYFYGHAACSENVELFRYQQQQLAAAVKRRLANDEEVNAAGCVVNTCGWVDGTGFDLLVQAIRDFDVDVVLVIGQDRLYSRLQSALTGANANGVDRSIVKLARSGGVVPLNNKLRSAARISCIREYFYGAHSLSVAI---PTLSPCINEFSFDDVSFYAIKDMKVSDVMLPVGQVETQTDRLRVVPVEKTADLGHSLAAVAHPPHGQDTSSL 387          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: A0A3M6VIE0_9STRA (Protein CLP1 homolog n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIE0_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.510e-100
Identity = 175/378 (46.30%), Postives = 234/378 (61.90%), Query Frame = 0
Query:   41 VLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVA------VINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGGAPALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHP 412
            VL  E E R +V  +  ++V LK  +AE+FG+ELA ++EY F   K A+FTWYGCT+E  G     Y ++ETPM SY+N H+QL+  R+ A         +  GPRV+V G  DSGKSTLT IL  YA+RLG  PT V+LDVG G ++VPG ++A+ LD NS+SVEE F LT PL +FYGH    +N ELF+   +++A+ +KRR+ ND   +ASG + NTCGWV+G G  LL HAI   ++DVVLV+  DRLY+ + +TL    A      ++ L RS GVV R+   R A R    REYFYG    + A+   P LSP      F+DVS F +    VSD MLPVG  +T    L+  P+  ++DL H++ AV HP
Sbjct:    8 VLAREAEYRVEVPPQTEVSVRLKSGSAELFGVELAIDHEYVFRDRKVAIFTWYGCTLEVNGAPEVAYTSEETPMDSYLNIHSQLQRCRELAKAK------HAAGPRVLVCGPVDSGKSTLTQILVNYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSVEEDFVLTNPLAYFYGHAMSSDNVELFRYQQQQLAKTVKRRLENDAQVNASGCVINTCGWVDGAGFDLLVHAIKDFEVDVVLVIGQDRLYSRLQSTLTGVHANGVDRSIVKLSRSDGVVPRNSKLRSALRISCIREYFYGAHSLSVAI---PTLSPCINEFSFDDVSFFAIKDMKVSDVMLPVGQVETQTDRLRAVPVEKTADLGHSLAAVAHP 376          
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Match: A0A8K1FEA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FEA6_PYTOL)

HSP 1 Score: 320 bits (821), Expect = 5.560e-99
Identity = 170/377 (45.09%), Postives = 236/377 (62.60%), Query Frame = 0
Query:   41 VLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVVGEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDIDASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVATLPR-----SVAVINLPRSGGVVLRSPTHRRASRDRRCREYFYGXXXXASAVGGAPALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSSDLLHTVLAVCHP 412
            VL+ E E R +VSA+  +TV L   +AE+FGIELA + EY     KAA+FTWYG T++ TG     Y + ETPM SYVN HAQL+ RR+ A          + GPRV++ G  DSGKSTLT+IL  YA+RLG  PT VDLDVGQ  ++VPG +AA  LD N +S+E+G+ LT PL FFYGHTN+ EN E F+ +++++A  +KRR+A+D + +ASG + NTCGWV+GLG  LL  +I   ++DVVLV+  DRL++ + ++L +       +++ L RSGGVV  +   R   R  R R+YFYG       +   P LSP       ++V  + +    VS  MLPVG + + +  L V  L  + +LLH++ AV HP
Sbjct:  292 VLERECEYRVEVSAQAPVTVKLVSGSAELFGIELAIDNEYTLRDQKAAIFTWYGATLQVTGTPEVAYTSDETPMNSYVNIHAQLQKRRELAKLK------GIAGPRVLIAGPVDSGKSTLTSILLNYALRLGEKPTHVDLDVGQSSLSVPGSVAATPLDMNCLSIEDGYVLTNPLAFFYGHTNMAENAEHFRSMLQQLARAVKRRLADDNEVNASGCVINTCGWVDGLGYDLLVESIQAFEVDVVLVIGQDRLFSRLQSSLAKLPGADRFSIVKLVRSGGVVPLNSKFRSTRRQSRIRDYFYGSHALTRPI---PLLSPCINEYSLDEVEFYAIKDMRVSAGMLPVGQTASEMSRLAVTKLEKTMELLHSIAAVAHP 659          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig101.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR58_ECTSI3.280e-26593.45Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KLD2_9PHAE4.390e-25493.69Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A835YJV7_9STRA4.240e-13854.48Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID... [more]
A0A2D4BR80_PYTIN1.580e-10246.34Protein CLP1 homolog n=1 Tax=Pythium insidiosum Ta... [more]
K3W9W5_GLOUD3.060e-10246.60Protein CLP1 homolog n=1 Tax=Globisporangium ultim... [more]
H3GV05_PHYRM4.750e-10246.23Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4... [more]
A0A3R7G6W1_9STRA1.300e-10146.75Protein CLP1 homolog n=3 Tax=Phytophthora kernovia... [more]
A0A6A4FNY2_9STRA4.020e-10145.82Protein CLP1 homolog n=1 Tax=Phytophthora rubi Tax... [more]
A0A3M6VIE0_9STRA1.510e-10046.30Protein CLP1 homolog n=1 Tax=Peronospora effusa Ta... [more]
A0A8K1FEA6_PYTOL5.560e-9945.09Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010655Pre-mRNA cleavage complex subunit Clp1, C-terminalPFAMPF06807Clp1coord: 352..413
e-value: 6.5E-10
score: 39.4
IPR038239Clp1, N-terminal beta-sandwich domain superfamilyGENE3D2.60.120.1030Clp1, DNA binding domaincoord: 32..112
e-value: 8.4E-24
score: 85.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 113..340
e-value: 1.8E-77
score: 261.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 145..238
IPR032324Clp1, N-terminal beta-sandwich domainPFAMPF16573CLP1_Ncoord: 42..131
e-value: 2.3E-28
score: 98.3
IPR038238Clp1, C-terminal domain superfamilyGENE3D2.40.30.330coord: 354..435
e-value: 1.6E-9
score: 39.8
IPR032319Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domainPFAMPF16575CLP1_Pcoord: 151..338
e-value: 1.5E-59
score: 200.9
NoneNo IPR availablePANTHERPTHR12755:SF6POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1coord: 36..412
IPR045116Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3PANTHERPTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1Pcoord: 36..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig101contigP-littoralis_Contig101:56660..66730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig101.12.1mRNA_P-littoralis_Contig101.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig101 56660..66730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig101.12.1 ID=prot_P-littoralis_Contig101.12.1|Name=mRNA_P-littoralis_Contig101.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=438bp
RAYTHKNVICCRLLNNVRNSGMATYSAGATAGAKVETRTWVLQAETELRF
DVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSSKAAVFTWYGCTIETT
GWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNVTGPRVMVV
GEADSGKSTLTNILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDS
NSMSVEEGFSLTAPLVFFYGHTNLQENPELFKKLVERMAECLKRRVANDI
DASASGAIFNTCGWVEGLGLQLLAHAITVLDIDVVLVMKHDRLYADMVAT
LPRSVAVINLPRSGGVVLRSPTHRRASRDRRCREYFYGGGGGASAVGGAP
ALSPAALHLEFNDVSIFRVGGQMVSDAMLPVGHSDTSLGPLQVNPLYPSS
DLLHTVLAVCHPVLRQDGTMLGGASGLEGDRDSAEAAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010655Clp1_C
IPR038239Clp1_N_sf
IPR027417P-loop_NTPase
IPR032324Clp1_N
IPR038238Clp1_C_sf
IPR032319CLP1_P
IPR045116Clp1/Grc3