mRNA_P-littoralis_Contig142.23.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig142.23.5 vs. uniprot
Match: D7G719_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G719_ECTSI) HSP 1 Score: 1201 bits (3107), Expect = 0.000e+0 Identity = 1060/2421 (43.78%), Postives = 1221/2421 (50.43%), Query Frame = 2
Query: 464 SLHDLPLGADTRQEVSAMTLEALSVVGEEDLPVVIRTLLKTVRERDSSRVVARVRAECAGLGPTALAVLVDVLADAFSFNESVTRAFLAGLTSSVASSTTTSGESRSFFGASSSSTSAPEQSXXXXXXXXXXXXXXXXXXXXXXXXXKSLSTLDVVGFLLLLPHRRHVAAVHNLLDKLSRNPERLPTDIIASLAARSGAPPWACLASPIRQLGLWAAMASPD-HRARVRSSTSSAXXXXXXXXXXXXXXXXXXX---------------LRLLRRAGSRILLAVFRGHPNARAPIVSCCLGVVGTHRLPTRGAGVGGLVGXXXXXXXCAEERYCSATDQLLETCLGALDLLLALADKCPALMLPYANTVGDLVLGGGRRTLHPRLLDKAAECLAALTRHSNS--MVNELMNHVQKQVFFLGAGGNGGGGSDEAVGRALALALGFRPAATVGGFGAGGQVNRWSPTPSGGPRSFSRRT**GEGRWKSATRTPCSAGRQGSSPSCVAAPHFWAPPLLPWSSL*LPPPAIPAAHILPRGRGEXXXAQQLXXXXXXXXXXXXXXXLAATVPEESTSGGKGGGVPGPRPPRGAWSGTGFCDSKLTDGVPGAEEEEEEAWRADDGEHRRWNRTKSWSM*QGRSLRNGAAFLAWSKDSHEK*EEEEQAWGHRRRHLQIRLRRRFASGTLRRPSGEVRLCFVLGRAVCL*CVCVEWGGGVF*SARSPRGFPVLQSGVQICMRKAESVVFFGGPVGAVLPTGRVTRRSGMIVPMW*WKVFLQSQSPPSARVVISCAAGSTKTLHHVAAANNRWLLSRPPPALPPFRASALPAPHRPSAESNASLSESARSLHRSWFAAITLSCGSAAGSXXXXXXXXXDPACHGDENPNVFGRESAGGDGGRGAAAGGRAGSREGLGRGTRVDSVGENPWLRARLSMPMWPFSDGCRGDEGPAEDPGGYWEVDGSADWESGGYPLWRVPAAECAWQGREGTQQVIEAGAACVTARSLISAAARFLLARL-PAFGS------FPECKDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSRARGVQDSAGAG----VAAAGTDGLAAAALLSDLVWRYLELGARGRVCVAALRRTARDMSRSGGXXXXXXXXXXXXXXXGDLSEGVGGSGSSIE---EEERAAARLEEGLRVEFIPLECLCRLVTAGVESRVTATTMAAXXXXXXXXXXTASLPPIDKESSGGNTASRDAWGGRGGRLHAKESSGAAA--TMGGSAMDSASTPSVVLVAYVELLRTLVARLETRDAGASGVGVAGEEPTRGTAKDWTGTGVRALNLETLFRGAVECSKALPLLRKAVASKSTRARPKFTPQKSGTMRSTPARPEAAAPGRRGGIHGSGRGSEVVPGTAKRQ------------KFSAAAAAAATKGPKDNTRWLGGHCVRRRDPGCRRRYSGGLRGVMEGRDGEHEDXXXXXX--EAVFSDNLSRESAWGSSESADESNGDSLSDTYDDQGTVEGAPKRAASTPRGKKRAATAMTPMMTPKMAAAG-PWSETPASARRN------VGASSLAAESSEINPWESMPGLSLCQFWRYRLLLEVVLAARGGRGGGEPDRGEEGRAAGLSGPRFAEVLAQLAAGTGSSSALAIDGVVESSASGGGSGGSGSRHPADEAVFLELSDQLESAEDGLLAGMIVEVLAALSTGLPRAEATAALSWKGLGVVYPRGYGAGYSHLGGVLGGLRREGISLLSSPISLRFFLN--RRGGATSRLRGQLTFSPHLRNA-AVLVRTGLPSLPFLQHALLTHWALAGRVGRLWALAAAVADIEAFVLGTSGRLSPSVYDISSSKGESSSKRSDTRKTPSFSSSFPS---TPPLCQDSFDTFVAAFVKLLPASLSLAAPSTXXXXXXXXX-RGGRSRDS----------------------SSSPYEEAECLGMVLECLVEACTESLDSGAWASSAGTEELTALRRLLRRLVFPVATCCTKALRALENQLGRSLAWRRSQPLAQKG---------------DAMDYGAARLCGGLLEQCDLCADAARALCTAVRAATFSEQKDVAADGKTSSTSKPHRAALDRVVKVLPGMVLQSDRLSSTVDNARGVLQLPRKPSGDRG-----GDKDEAFADRQRRRPPPKTLTR--ASERLLSRFVA--------GGGGQRACAGRVVETSRGVAPSRKKGEKRLLSLGAQLTTSWTRVG-SFKNGFRDSTARTPAAAPAFTVQALAGLATPRYVARGDV-----RPIERPSRDSSSTTARGAXXXXXXXXXXXXXXXXXXXXXSSVQGETVEGDT----RGGVVGSGNAAAASPASGGNVALARGGTTHSAEGVEG----------GTTSDYREADGYEGFADEEXXXXXXX-VDQFRAVGGWGTY 7321
SL+DLPLGADTRQEVS MTLEALSVV EED+PVV+RTL KT RERDS+ VV+RVRAECAGLG TALAVLVDVLAD FS NESV + FLA +++SVASS GESRSF SS + +A EQ LSTLDVVGFLLLLPHRRHVAAVH+LLDK+SR PERLPTD I SLA SG PPW C+ASPIR+LGLWAAMASP RAR S+ S XXXXXXXXX L LRRAG+RILLAVFRG PNARAPIVSCCLGVVGTHRLP+RG G G ER +A D LL TCLGALDLLL L++ CP LM PYANTVGDLVLGGG RTLHPRLLDKAA CLA LTR SN MVNELMNHVQKQVFFLGAG GGG A G SG P + KSA R G A LL W A +L RG + + AT + + GG+GG +DG G + HRR ++ + GR L G L + R G G + W G AR+ + V + + + SPPS A G+T + +A A R E N +LSESARSLH SWFAAITLSC +AA XXXXXXXXX H + P F ++ G D G WLRARL MP+WPFSD GDEGP ED GGYW + G D GGY LWR+P AECAWQG+EGTQQ++EAGAACV ARSL+S+AA++LLA L P GS F + NN XXXXX G R+ DS G + A G +++LLSDLVWRYLELGARGRVCVAALRRTAR ++ SG XXXXXXXXXX V GS +S E EEERAA RLEEGL + G E+ T S+G D GR + E + T GS MD TPSVVLVAYVELLRTLV RLE+ GA G P GVRAL+LETLFRG V+CSKALP+LRKA A+ T KFTPQK R AA + I S R + + + A+ G + RWLGG VRRR R GGLRGVMEG D + XXXXXX E VFSD ASTP+GK+ AG PWSE V A E NPW+ +PGLSLCQFWRYRLLLEVVLAARGG GGG+ +R + G A L F EV+ QLAA T S A + A++AVF ELS+Q + AEDGLLAGM+VEVLAALS GLPR+E A LSWKGL VYPRGYGAGYSH+GGV+GGLRR+G SLLSSP+SLRFFL+ R GG TSRLRGQL F H+ NA A+L RTGLP+LPFLQHALLTHWAL+GR+GR W LAAAV D+EAFVLG +G D +S + SS++ T + S+SSS P+ TP L Q++ D F+ A VKLLPASL+LA+P +GG +R+ SSSPYEE ECLGMVLECLVEAC ESL +GAW SSAG EELTAL RLLRR V PVA CC+K LRALE+QL R+LAWR SQ L G + +D+GAARLC GLLEQCDLCADA R L TAVR+ATF E+KD AD S +PHR DR+VK+LPG VLQSD+LS+ VD+ARGVLQLPRK D GDKDEA + RP KT +R ASERLLSR A G GG+ G V +T RG K G RLLSLGA+L SW V S K+G R A TP AA A T+ A + P + D R +P +S +T G SS E EG + R G G G + P G A G ++ EG G G D G+E + +E XXXXXXX VDQFR VGGWGT+
Sbjct: 102 SLYDLPLGADTRQEVSTMTLEALSVVDEEDVPVVVRTLFKTARERDSAMVVSRVRAECAGLGMTALAVLVDVLADTFSINESVAKTFLAQVSASVASSAA--GESRSFV-PSSVAGAAGEQGEEVD----------------------PLSTLDVVGFLLLLPHRRHVAAVHSLLDKISRRPERLPTDKIVSLAEMSGKPPWTCIASPIRELGLWAAMASPALSRARGSSNASPGPSNSIGGAGNXXXXXXXXXXXXIDSYSRSSSASSLASLRRAGARILLAVFRGQPNARAPIVSCCLGVVGTHRLPSRGGRGGAGAGPRGG------ERDVAA-DALLGTCLGALDLLLELSENCPDLMSPYANTVGDLVLGGGGRTLHPRLLDKAARCLAVLTRQSNGIGMVNELMNHVQKQVFFLGAGSVGGGXXXXXXXXXXXXXXXXXLQA--------GHXXXXXXGRSGDP----------DAERKSAIVLATHLIRGG------ALEERDEDALLGW-----------AVRLLSLLRGGPSSLHTIALTLELL--------VTATSGDLCSPGGQGGRXXXX-----------XXXXXSSDGSRGVD-------------HRREGWRRAGAAAAGRCLA-GIGVLRLEEGG------------------------RGVGGDXXXXXGRE--------------LASRWQGRAPPLARNEKEL------VDVTRALGQEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAPTMSPPSP------AGGATLCVRDMAIAMWR--------------------------EGNTTLSESARSLHSSWFAAITLSCRNAASXXXXXXXXXXXXXFHSNGTPTSFDQQRVX----XXXXXXXXXXXXXXXXSGDNADPRGGGSWLRARLGMPVWPFSDESYGDEGPIEDSGGYWGLGGGTDGLGGGYSLWRIPTAECAWQGKEGTQQLVEAGAACVAARSLLSSAAKYLLANLSPTEGSPLLPETFAKATSNNQRSGXXXXXGGNDYGSR-----------------GARRSHADADSRDTGGVVDLNAGEASGPGSSSLLSDLVWRYLELGARGRVCVAALRRTARQLAGSGXXXXXXXXXXX-----------VRGSAASTEGEGEEERAATRLEEGLSL-------------GGEETWST--------------------------SNGRYVEKND------GRCRSAEDTAMTTPTTAMGSLMDGVKTPSVVLVAYVELLRTLVTRLES--GGARGXXXXXXXPAGVVL------GVRALDLETLFRGTVKCSKALPILRKAQATSKTALLAKFTPQKR-------RRESFAALQNKQKISVSARXXXXXXXXXXXXXXXXXXXXXXXXRRTRSIDASRGGGSRGTARWLGGDSVRRR---VDRGVIGGLRGVMEGGDSDXXXXXXXXXXXEVVFSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRYPRASTPKGKRXXXXXXXXXXXXXXTGAGGPWSEXXXXXXXXXXXXXXVAAGGSRTADVEANPWKGLPGLSLCQFWRYRLLLEVVLAARGGDGGGD-ERSDGGGWAELPRTEFVEVMKQLAAATSSRPAXXXXXXXXXXXX------XDDLYDAEDAVFSELSEQHDKAEDGLLAGMVVEVLAALSAGLPRSEEAAVLSWKGLRAVYPRGYGAGYSHVGGVVGGLRRQGASLLSSPVSLRFFLHLHRYGGTTSRLRGQLQFPSHMGNASAMLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVDMEAFVLGKTGPTCKGSEDSASRQQSSSARHKATPSSSSWSSSPPTLTPTPVLSQENLDVFITAVVKLLPASLALASPQKPSAEPPGTSVQGGATRNDVTGSGVVYTESGSRVRGPIPGVSSSPYEELECLGMVLECLVEACIESLYNGAWNSSAGAEELTALGRLLRRCVLPVALCCSKTLRALESQLERALAWRCSQTLDVNGVRDRGKSAAVPGGSTEGVDFGAARLCRGLLEQCDLCADAVRTLGTAVRSATFPEEKDGGADAP--SALRPHRTVRDRIVKILPGAVLQSDQLSAAVDHARGVLQLPRKAGRDDDDDGITGDKDEASPGHKLPRPTSKTSSRRGASERLLSRCAAXXXXXXXEGQGGE--VGGMVADTRRGGVVRGKLGGMRLLSLGAELRVSWAGVEPSNKDGGRRE-ASTPFAAAAPTLAAQSSRPAPSTLRTADSVEWRRRQQGQPHGESPNTATSGEAAQAVTQGEIFAGTKVNAVEPSSWVEEAAEGGSSAVERAGSGGVGRGPSFFPRDG-----AGGSSSGRLEGAPGDEATGSRMSPGDGGDVHGEGGFEAYEEEXXXXXXXXEVDQFRVVGGWGTF 2234
BLAST of mRNA_P-littoralis_Contig142.23.5 vs. uniprot
Match: A0A6H5J6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6E0_9PHAE) HSP 1 Score: 626 bits (1615), Expect = 3.370e-188 Identity = 633/1642 (38.55%), Postives = 739/1642 (45.01%), Query Frame = 2
Query: 1421 ATDQLLETCLGALDLLLALADKCPALMLPYANTVGDLVLGGGRRTLHPRLLDKAAECLAALTRHSNS--MVNELMNHVQKQVFFLGAGGNGGGGSDEAVGRALALALGFRPAATVGGFGAGGQVNRWSPTPSGGPRSFSRRT**GEGRWKSATRTPCSAGRQGSSPSCVAAPHFWAPPLLPWSSL*LPPPAIPAAHILPRGRGEXXXAQQLXXXXXXXXXXXXXXXLAATVPEESTSGGKGGGVPGPRPPRGAWSGTGFCDSKLTDGVPGAEEEEEEAWRADDGEHRRWNRTKSWSM*QGRSLRNGAAFLAWSKDSHEK*EEEEQAWGHRRRHLQIRLRRRFASGTLRRPSGEVRLCFVLGRAVCL*CVCVEWGG----GVF*SARSPRGFPVLQSGVQICMRKAESVVFFG---GPVGAVLPTGRVTRRSGMIVPMW*WKVFLQSQSPPSARVVISCAAGSTKTLHHVAAANNRWLLSRPPPALPPFRASALPAPHRPSAESNASLSESARSLHRSWFAAITLSCGSAAGSXXXXXXXXXDPACHGDENPNVFGRESAGGDGGRGAAAGGRAGSREGLGRGTRVDSVGENPWLRARLSMPMWPFSDGCRGDEGPAEDPGGYWEVDGSADWESGGYPLWRVPAAECAWQGREGTQQVIEAGAACVTARSLISAAARFLLARL-PAFGS------FPECKDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSRARGVQDSAGAG----VAAAGTDGLAAAALLSDLVWRYLELGARGRVCVAALRRTARDMSRSGGXXXXXXXXXXXXXXXGDLSEGVGGSGSSIEEEERAA----ARLEEGLRVEFIPLECLCRLVTAGVESRVTATTMAAXXXXXXXXXXTASLPPIDKESSGGNTASRDAWGGRGGRLHAKESSGAAATMGGSAMDSASTPSVVLVAYVELLRTLVARLETRDA-GASGVGVAGEEPTRGTAKDWTGT--GVRALNLETLFRGAVECSKALPLLRKAVASKSTRARPKFTPQKSGTM-------RSTPARPEAAAPGRRGGIHGSGRGSEVVPGTAKRQKFSAAAAAAATKGPKDNTRWLGGHCVRRRDPGCRRRYSGGLRGVMEGRDGEHEDXXXXXXEAVFSDNLSRESAWGSSESADESNGDSLSDTYDDQGTVEGAPKR--AASTPRGKKRAATAMTPMMTPKMAAAGPWSETPASARRNV------GASSLAAESSEINPWESMPGLSLCQFWRYRLLLEVVLAARGGRGGGEPDRGEEGRAAGLSGPRFAEVLAQLAAGTGSSSALAIDGVVESSASGGGSGGSGSRHPADEAVFLELSDQLESAEDGLLAGMIVEVLAALSTGLPRAEATAALSWKGLGVVYPRGYGAGYSHLGGVLGGLRREGISLLSSPISLRFFLNRRGGATSRLRGQLTFSPHLRNA-AVLVRTGLPSLPFLQHALLTHWALAGRVGRLWALAAAVADIEAFVLGTSGRLSPSVYDISSSKGESSSKRSDTRKTPSFSS------SFPSTPPLCQDSFDTFVAAFVKLLPASLSLAAPSTXXXXXXXXX-------------------RGGRSRDS----SSSPYEEAECLGMVLECLVEACTESLDSGAW 6130
A D LL TCLGALDLLL L++ CP LM PYANTVGDLVLGGG RTLHPRLLDKAA CLA LTR SN MVNELMNHVQKQVFFLGAG GGGG L A GF G GAG Q S G R KSA R G A LL W A +L RG + + AT + + GG+GG SG +DG G + E WR R GAA A+G G +RL E GG GFP Q Q + E FG G G G++ G+ Q+ +P S A+G+T + +A A R E N +LSESARSLH SWFAAITLSC + SXXXXXXXXX D+ G WLRARLSMP+WPFSD GD+GP ED GGYW V G D GGY LWR+P ECAWQG+EGTQQ++EAGAACV ARSL+S+AA++LLA L P GS F + +NN G R DS+ G + A T G +++LLSDLVWRYLELGARGRVCVAALRRTAR ++ SG XXXXXXXX S GV GS +S E E RLEEGL + + G E+ T+TT + K+ G +A A + T G+ M+ TPS+VL+AYVELLRTLV RLE+ A G A+ G GVRAL++ETLFR K LP+LRKA A+ T K TPQK + TPA A G + + A+ G +D RWLGG VRRR R S GLRGVMEG D E E XXXXXX R STP+GK+ GPWSETP A E NPWE +PGLSLCQFWRYRLLLEVVLAARGG GGGE +R + G A L F EV+ QLA+ T SS A +++S GG + A+EAVF ELS+Q + AEDGLLAGM+VEVLAALS GLPR+E A LSWKGL VYPRGYGAGYSH+GGV+GGLR SRLRGQL F PH+ NA A+L RTGLP+LPFLQHA LTHWAL+GR+GR W +AAAV D+EAFVLG +G + +S + SS++ + TPS SS P L Q++FD F+A VKLLPASL+LAAP T G R+R S SSSPYEE ECLGMVLECLVEAC ESL +GAW
Sbjct: 2 AADALLGTCLGALDLLLELSENCPDLMSPYANTVGDLVLGGGGRTLHPRLLDKAARCLAVLTRQSNGIGMVNELMNHVQKQVFFLGAGSGGGGGR-------LGGATGF----PGGRQGAGVQAGHGSGLGRSGDPDAER---------KSAIVLAMHLMRGG------ALEERDEDALLGW-----------AVRLLSLLRGGPSSLHTIALTLELL--------VTATSGDLCSPGGQGGR-----------SGNDSAGGATSDGRTGIDHRRE-GWR-----------------------RAGAA----------------------------------AAGRCLAGIGVLRL---------------EGGGRGXXXXXXXXXXREGFPQWQG--QEGEVEEEEARLFGEEQGRGGGGHVVGQMRGGRGLA----------QTTTPSSP------ASGATLCVRDMAIAMWR--------------------------EGNTTLSESARSLHSSWFAAITLSCRNET-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADARGGGSWLRARLSMPVWPFSDESYGDKGPVEDSGGYWGVGGGTDGWGGGYSLWRIPTVECAWQGKEGTQQLVEAGAACVAARSLLSSAAKYLLAHLAPTGGSPLLPERFAKATNNNIRSGGGGGNDYGSR--------------------GARRCHADADSSDTGGVVDLDAGETSGPGSSSLLSDLVWRYLELGARGRVCVAALRRTARQVAGSGXXXXXXXXX---------XSAGVRGSAASTEGEXXXXXXXXTRLEEGLSLAAMATSPTTXXXXXGEEA--TSTTSDGRY--------------VKKKDGGCRSAENRAM-------------ATSTTTMGNLMNGVKTPSIVLMAYVELLRTLVTRLESGGARGXXXXXXXXXXXXXXXAEGPAGVAPGVRALDVETLFR------KTLPILRKAQAASKTALLAKLTPQKRRRESLAALQNKKTPASANRLA----GRTXXXXXXXXXXXXXXXXXXXTRSIHASRGGGSRDTARWLGGDSVRRRGG---RAVSSGLRGVMEGGDSESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPRYPRTSTPKGKRXXXXXXXXXXXXXTGTGGPWSETPXXXXXXXXXXXXFAAGGGRTADGEANPWEGLPGLSLCQFWRYRLLLEVVLAARGGVGGGE-ERSDGGGWAELPRTEFVEVMKQLASAT--SSRPASTAAIDTSG-----GGGDDLYDAEEAVFSELSEQHDRAEDGLLAGMVVEVLAALSAGLPRSEEGAVLSWKGLRAVYPRGYGAGYSHIGGVVGGLR------------------------SRLRGQLQFPPHMGNASAMLSRTGLPALPFLQHAFLTHWALSGRMGRAWGVAAAVVDVEAFVLGKTGPTCKGSEEPASRQQSSSARH---KATPSSSSWXXXXXXXXXXPVLSQENFDVFMATLVKLLPASLALAAPQTPPAGPPASSVQGGATGSCVTGRGVICAEGGSRARGSIPGVSSSPYEELECLGMVLECLVEACIESLYNGAW 1363
BLAST of mRNA_P-littoralis_Contig142.23.5 vs. uniprot
Match: D7G721_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G721_ECTSI) HSP 1 Score: 597 bits (1538), Expect = 9.130e-181 Identity = 499/1085 (45.99%), Postives = 588/1085 (54.19%), Query Frame = 2
Query: 3317 PAAECAWQGREGTQQVIEAGAACVTARSLISAAARFLLARLPAFGSFPECKDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTSRARGVQDSAGAG----VAAAGTDGLAAAALLSDLVWRYLELGARGRVCVAALRRTARDMSRSGGXXXXXXXXXXXXXXXGDLSEGVGGSGSSIEEEERAAARLEEGLRVEFIPLECLCRLVTAGVESRVTATTMAAXXXXXXXXXXTASLPPIDKESSGGNTASRDAWGGRGGRLHAKESSGAAA--TMGGSAMDSASTPSVVLVAYVELLRTLVARLETRDAGASGVGVAGEEPTRGTAKDWTGTGVRALNLETLFRGAVECSKALPLLRKAVASKSTRARPKFTPQKS----GTMRSTPARPEAAAPGRRGGIHGSGRGSEVVPGTAKRQKFSAAAAAAATKGPKDNTRWLGGHCVRRRDPGCRRRYSGGLRGVMEGRDGEHEDXXXXXXEAVFSDNLSRESAWGSSESADESNGDSLSDTYDDQGTVEGAPKRA----ASTPRGKKRAATAMTPMMTPKMAAAGPWSETPASARRNVGASSLA------AESSEINPWESMPGLSLCQFWRYRLLLEVVLAARGGRGGGEPDRGEEGRAAGLSGPRFAEVLAQLAAGTGSSSALAIDGVVESSASGGGSGGSGSRHPADEAVFLELSDQLESAEDGLLAGMIVEVLAALSTGLPRAEATAALSWKGLGVVYPRGYGAGYSHLGGVLGGLRREGISLLSSPISLRFFLN--RRGGATSRLRGQLTFSPHLRNAAVLV-RTGLPSLPFLQHALLTHWALAGRVGRLWALAAAVADIEAFVLGTSGRLSPSVYDISSSKGESSSKRSDTRKTPSFSSSFPS-TPPLCQDSFDTFVAAFVKLLPASLSLAAPSTXXXXXXXXX-RGGRSRDS----------------------SSSPYEEAECLGMVLECLVEACTESLDSGAWASSAGTEELTALRRLLRRLVFPVATCCTKALRALENQLGRSLAWRRSQPLAQKG---------------DAMDYGAARLCGGLLEQCDLCADAARALCTA 6385
P + + RE TQQ++EAGAACV ARSL+S+AA++L A L G P + XXXXXXXXX G R+ DS+ G + A G +++LLSDLVWRY ELGARGRVCVAALRRTAR ++ SG XXXXXXXXXXXXXXX RAA RLE GL +E +PLECLCRLV A VE+ V AT+ AA TAS P ++E+S +T++ GR + E + A T GS MD TPSVVLVAYVELLRTLV RLE+ A G + GVRAL+LETLFRG V+CSKALP+LRKA A+ T K TPQK + + A+ G + RWLGG VRRR R GGLRGVMEG D + XXXXXX ASTP+GK E NPWE +PGLSLCQFWRYRLLLEVVLAARGG GGG+ +R + G A L F EV+ QLAA T S A + A++ VF ELS+Q + AEDGLLAGM+VEVLAALS GLPR+E A LSWKGL VYPRGYGAGYS +GGV+GGLRR+G SLLSSP+SLRFFL+ R G TSRLRGQL F PH+ NA+V++ RTGLP+LPFLQHALLTHWAL+GR+GR W LAAAV D+EAFVLG +G S + + + SS++ T + S+SSS P+ TP L Q++ D F+AA VKLLP SL+LA+P RGG +R+ SSSPYEE ECLGMVLECLVEAC ESL +GAW SSAG EELTAL RLLRR V PVA CC+K LR LE+QL R+LAWR SQ L KG + +D+GAARLC GLLEQCDLCADA R L TA
Sbjct: 34 PRRHSSRRSRESTQQLVEAGAACVAARSLLSSAAKYLRAHLSPTGGSPLLPET--------FAKATSNNPRSGXXXXXXXXXNVYGSRGARRSHADADSSDTGGVVDLNAGEASGPGSSSLLSDLVWRYPELGARGRVCVAALRRTARQVAGSGXXXXXXXXXXXXXXXXXXXXXXXXXX--------RAATRLEGGLSLELMPLECLCRLVNADVENYVIATSTAAMATSPT----TASSPRGEEETS--STSNGRYVEKNDGRCRSAEDTAMATSTTAMGSLMDGVKTPSVVLVAYVELLRTLVTRLESGGAREGGAALXXXXXXX-XGPAGVALGVRALDLETLFRGTVKCSKALPILRKAQATSKTALLAKLTPQKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSIDASRGGGSRGTARWLGGDSVRRRGG---RGVIGGLRGVMEGGDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRYPRASTPKGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRTADVEANPWEGLPGLSLCQFWRYRLLLEVVLAARGGDGGGD-ERSDGGGWAELPRTEFVEVMKQLAAATSSRPASXXXXXXXXXXX------XDDLYDAEDVVFSELSEQHDKAEDGLLAGMVVEVLAALSAGLPRSEEAAVLSWKGLRAVYPRGYGAGYSRVGGVVGGLRRQGASLLSSPVSLRFFLHLHRYSGTTSRLRGQLQFPPHMGNASVMLSRTGLPALPFLQHALLTHWALSGRMGRAWGLAAAVVDMEAFVLGKTGPTCKSSEEPAFRRQSSSARHKATPSSSSWSSSPPTPTPVLSQENLDVFIAAVVKLLPTSLALASPQKPLTGPPATSVRGGATRNDVTGSGVIYAESGSRVRGPIPGVSSSPYEELECLGMVLECLVEACIESLYNGAWNSSAGAEELTALGRLLRRCVLPVALCCSKTLRTLESQLERALAWRCSQTLDVKGVRDRGKSATVPGGSTEGVDFGAARLCRGLLEQCDLCADAVRMLGTA 1085
BLAST of mRNA_P-littoralis_Contig142.23.5 vs. uniprot
Match: A0A835Z3F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3F5_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.450e-21 Identity = 116/362 (32.04%), Postives = 145/362 (40.06%), Query Frame = 2
Query: 464 SLHDLPLGADTRQEVSAMTLEALSVVGEEDLPVVIRTLLKTVRERDSSRVVARVRAECAGLGPTALAVLVDVLADAFSFNESVTRAFLAGLTSSVASSTTTSGESRSFFGASSSSTSAPEQSXXXXXXXXXXXXXXXXXXXXXXXXXKSLSTLDVVGFLLLLPHRRHVAAVHNLLDKLSRNPERLPTDIIASLAARSG-APPWACLASPIRQLGLWAAMASPDHRARVRSSTSSAXXXXXXXXXXXXXXXXXXXLRLLRRAGSRILLAVFRGHPNARAPIVSCCLGVVGTHRLPTRGAGVGGLVGXXXXXXXCAEERYCSATDQLLETCLGALDLLLALADKCPALMLPYANTVGDLVLGGG 1546
SLHDLPL R V+A+TLEAL++V EED+PVV+RTLL+T C L LAV++DVLADAF + VT+AFLA + VA + +AP LS +DVV LLLLP H AAV L L+ P R+P + A G W L + + L LW A AR RSS+SS LR +L VF P R I+S CL V G L A + A R LL + LD+L ALA + P L+ P A + D L GG
Sbjct: 122 SLHDLPLRRAARAAVAALTLEALAIVDEEDVPVVVRTLLRT----------------CGELQHATLAVMIDVLADAFLLHAGVTKAFLAAVARDVA---------------AGGGDAAP------------------------------LSDVDVVALLLLLPLPHHAAAVERCLLALAAAPARMPWGALMRAAEAGGRGAQWGRLLATLIDLALWLLTAPVRLAARPRSSSSSGAAASETDAAQ------------LRDGACAVLFVVFETCPPHRERIISACLSVAGD--LGRAAAAATAALEIALIKPGPAVPRA------LLLSAAAPLDVLRALATRMPQLLAPSAAAISDFALHGG 402
BLAST of mRNA_P-littoralis_Contig142.23.5 vs. uniprot
Match: W7TYH3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYH3_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 7.290e-9 Identity = 114/433 (26.33%), Postives = 170/433 (39.26%), Query Frame = 2
Query: 464 SLHDLPLGADTRQEVSAMTLEALSVVGEEDLPVVIRTLLKTVRERDSSRVVARVRAECAGLGPTALAVLVDVLADAFSFNESVTRAFLAGLTSSVASSTTTSGESRSFFGASSSSTSAPEQSXXXXXXXXXXXXXXXXXXXXXXXXXKSLSTLDVVGFLLLLPHRRH-VAAVHNLLDKLSRNPERLPTDIIASLAARSGAPP--WACLASPIRQL------GLWAAMASPDHRARVRSSTSSAXXXXXXXXXXXXXXXXXXXLRLLRRAGSRILLAVFRGHPNARAPIV--------SCCLGVVGTHRLPTRGAGVGGLVGXXXXXXXCAEERYCSATDQLLETCLGALDLLLALADKCPALMLPYANTVGDLVLGGGRRTLHPRLLDKAAECLAALTR-HSNSMVN-ELMNHVQKQVF-----FLGAGGNGG 1690
+L DLPLG R+E A+ EAL+VV + D+PV++RTLL+++ + V+ ++R ECA L P A+AVL++VL+ + + V R L + RS GA S Q + +S +D + +LLLPH H A LL L+ +P P S R G P CLAS + + LW A+AS + S R R + +L +F+ H R I+ +C GV LP GAG G G T +LLE + +++ LA L++PYA + D +L P L+ L+ L R H+ S + L ++QK ++ G G GG
Sbjct: 143 ALFDLPLGPRLRREALALAEEALAVVKDADVPVIVRTLLRSLDDHSDPAVLGQIRRECANLSPQAMAVLMEVLSSTLATSPRVARLLLMSI--------------RSCAGAKSVLLGRQRQELQ-----------------------QHISIVDALTLVLLLPHPSHRPVAQETLLRALAASP---PIQA-ESGGQRRGRPASRGRCLASHLCAIVELTVDKLWQAVAST-------LAEMSQWLLLSALLPPPCPSPGLEAGRQARALATHLLRRLFQLHVGLRDEILGFLMTLFLACGRGVAAGLELPG-GAGCRGGRGGG------------QRTSELLELMRASHSIIVGLAQDSSQLLVPYAGMLCDQLLNSAFEIPVP-LMAPLLRSLSLLARSHAASGIEITLFIYIQKHLWTNSVTHAGTGARGG 513 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.23.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig142.23.5 >prot_P-littoralis_Contig142.23.5 ID=prot_P-littoralis_Contig142.23.5|Name=mRNA_P-littoralis_Contig142.23.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1379bp MPMWPFSDGCRGDEGPAEDPGGYWEVDGSADWESGGYPLWRVPAAECAWQback to top mRNA from alignment at P-littoralis_Contig142:33583..56839- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig142.23.5 ID=mRNA_P-littoralis_Contig142.23.5|Name=mRNA_P-littoralis_Contig142.23.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=23257bp|location=Sequence derived from alignment at P-littoralis_Contig142:33583..56839- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig142:33583..56839- >mRNA_P-littoralis_Contig142.23.5 ID=mRNA_P-littoralis_Contig142.23.5|Name=mRNA_P-littoralis_Contig142.23.5|organism=Pylaiella littoralis U1_48|type=CDS|length=4137bp|location=Sequence derived from alignment at P-littoralis_Contig142:33583..56839- (Pylaiella littoralis U1_48)back to top |