mRNA_P-littoralis_Contig141.14.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 238 bits (608), Expect = 3.570e-73 Identity = 134/248 (54.03%), Postives = 166/248 (66.94%), Query Frame = 1
Query: 1 PSFKISNVFREMERQTGLSTDTFSLHLPDGMKVFDCDILGDVEIEDGDQLDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQRPLSNKLKQASAT------------EQCEWSVHATPDGSLQDLSTGRAYPYLFWEADAVNGGVKQSFGLDETEPFCVAGHAAGTARTVLMGVFLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
PS + +V ++++ G+ + + + G + D L D I +G L+L S KPVILLYPPAP+ TVAV+LSPLWSFS+LY + LKQ +A +QC+W+VHA+P GSL+DLSTGR YPYLFWEAD+ +G V +SFGLD + FCVAG AAG VFLD AL+RLGL+ R+RCDM+T WL QLESS F IYFV+ RYEQAARLTIV TPDVTIRVFMAFR
Sbjct: 176 PSETVLDVKKKVQDTQGIPCEQQRI-IYAGQQTSDDRTLRDCNIRNGSVAHLVL--SLRKPVILLYPPAPVDITVAVELSPLWSFSSLYPKLQPRNLKQLAADYEAGSQANVAGGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADSSDGRVTRSFGLDGSRSFCVAGEAAG--------VFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFR 412
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: A0A8H6HM41_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6HM41_9AGAR) HSP 1 Score: 136 bits (342), Expect = 1.130e-34 Identity = 87/247 (35.22%), Postives = 124/247 (50.20%), Query Frame = 1
Query: 1 PSFKISNVFREMERQTGLSTDTFSLHLPDGMKVFDCDILGDVEIEDGDQLDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQRPLSNKLKQASATEQCEWSVHATPDGSLQDLSTGRAYPYLFWEADAVNGGVKQSF-----GLDETE-PFCVAGHAAGTARTVLMGV-----FLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
PS KI + ++ G+ D L+ DG +V D LG + +E+GDQL+L+ V G KPVI LYP + + + L P W FSA+Y P+ K ++ +W V A P G L +++TG YL+WEA+ G+ G E PF + + TVL+ V +LD AL+ LGL R +TYWL L + A+ F+ + YE AA L I PDV R+FM F+
Sbjct: 60 PSLKIQKIMEVLKAHYGIPCDDQRLYY-DGERVLPDDTLGSLGVENGDQLELMPVLKGAKPVIYLYPTTATRISTTLSLVPEWEFSAIY--PVV-PAKSTENGQELKWVVDAQPSGILTEVATGMEVSYLYWEAETTGKGLVSPPLSPIPGATTVEAPFVPNRASLDSKDTVLLEVAKITPYLDGALKALGLHVEARTSFVTYWLPTLLKHEYVALRFLPQSAYEHAAPLKIDPIPDVVSRIFMLFK 302
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: A0A8H5ASV9_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5ASV9_9AGAR) HSP 1 Score: 133 bits (335), Expect = 9.850e-33 Identity = 84/247 (34.01%), Postives = 123/247 (49.80%), Query Frame = 1
Query: 1 PSFKISNVFREMERQTGLSTDTFSLHLPDGMKVFDCDILGDVEIEDGDQLDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQRPLSNKLKQASATEQCEWSVHATPDGSLQDLSTGRAYPYLFWEADAVNGGVKQS-----FGLDETE-PFCVAGHAAGTARTVLMGV-----FLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
PS K+ + ++ G+ D L+ +G +V D LG + +EDGDQL+++ V G KPVI LYP + + + L P W FSA+Y P+ K ++ +W V A P G L +++TG YL+WEA+ G+ G E PF + + TVL+ V +LD AL+ LGL R TYWL L + A+ F+ + YE AA L + PDV R+FM F+
Sbjct: 164 PSLKMQKIMEVLQAYYGIPCDDQRLYY-EGERVIPDDTLGSLGVEDGDQLEMMPVLKGAKPVIYLYPTTATRISTTLSLVPEWEFSAIY--PVV-PAKSTENGQKLKWVVDAQPSGILTEIATGMEVSYLYWEAETTGKGLLSPPLSPVTGATTVEAPFVPNQASLDSKDTVLLEVAKITPYLDGALKALGLHVEARTSFTTYWLPTLLKHEYVALRFLPQSAYEHAAPLKVDPIPDVVSRIFMLFK 406
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: D7FN69_ECTSI (Ubiquitin family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN69_ECTSI) HSP 1 Score: 124 bits (312), Expect = 2.550e-32 Identity = 58/95 (61.05%), Postives = 71/95 (74.74%), Query Frame = 1
Query: 310 EQCEWSVHATPDGSLQDLSTGRAYPYLFWEADAVNGGVKQSFGLDETEPFCVAGHAAGTARTVLMGVFLDSALQRLGLSARKRCDMITYWLAQLE 594
+ CEW VHA PDGSL D+ST R YPYLFWEAD+ +G V +FGL++T FCVAG+ AG +FLD AL+RLGL+ R+RCD+ITYWL QLE
Sbjct: 72 QHCEWIVHANPDGSLTDISTSREYPYLFWEADSTDGLVCGNFGLEKTPSFCVAGNDAG--------LFLDVALERLGLNVRERCDVITYWLPQLE 158
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: A0A550C5E0_9AGAR (Uncharacterized protein n=1 Tax=Auriculariopsis ampla TaxID=97359 RepID=A0A550C5E0_9AGAR) HSP 1 Score: 130 bits (326), Expect = 2.340e-31 Identity = 82/212 (38.68%), Postives = 111/212 (52.36%), Query Frame = 1
Query: 130 IEDGDQLDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQR-PLSN-KLKQASAT---EQCEWSVHATPDGSLQDLSTGRAYPYLFWEADAVNGGVKQ---SFGLDETEP------FCVAGHAAGTARTVLMGV-----FLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
++DGD +D+ + Q GGKPVI LY P ++ATV + L+ W FS +Y P+ +L AT + EW V DG+L++LSTG YL+WEA G+ S D T+P F A + +VL+ V +LD+AL +GL R ITYWL L A+ FV A YE+AA L +V PDV RVFM F+
Sbjct: 232 LQDGDHIDVHMEQKGGKPVIYLYAPQQVEATVRLSLTYEWGFSVVYPVVPVKKARLGTGEATKVGQAVEWRVQTQQDGTLRELSTGLDVAYLYWEARTEGAGISSPPPSPSRDTTQPTPTTEVFSPATSSVSDGDSVLLAVDGITLYLDAALAAMGLHTEARTSFITYWLPALLKHKHVALRFVNQAAYERAAPLEVVPAPDVVTRVFMLFK 443
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: D8QFP1_SCHCM (Uncharacterized protein n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8QFP1_SCHCM) HSP 1 Score: 128 bits (322), Expect = 4.420e-31 Identity = 79/220 (35.91%), Postives = 116/220 (52.73%), Query Frame = 1
Query: 88 GMKVFDCDILGDVEIEDGDQLDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQRPLSNKLKQASATEQCEWSVHATPDGSLQDLSTGRAYPYLFWEADAVNGGV--KQSFGLDETEPFC--------VAGHAAGTARTVLMGV---FLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
G+++ D + V +EDGD +D+ VQ GG PV+ LY P P++ATV + L P W+FS +Y P+ +K +A + EW V DG+L++L+TG YL+WEA G S T P ++G + + + +G +LD+AL LGL R ITYWL + A+ F++ A YE+AA L + PDV RVFM F+
Sbjct: 184 GIRLTPTDTVDSVGLEDGDTVDVWDVQKGGNPVVYLYSPQPVEATVRLSLVPEWNFSVVY--PVV-PVKSTAAGQGLEWRVRTQQDGTLRELTTGLEVAYLYWEAKTDGAGTISPPSSPALATPPAITQEVFRPSLSGLSDEDSVVLPIGTVTPYLDTALAALGLHTEARTSFITYWLPSMLKHQHVALRFIEQAAYERAAPLDVTPAPDVVTRVFMLFK 400
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: A0A8H6HKS0_9AGAR (Ubiquitin-like domain-containing protein n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6HKS0_9AGAR) HSP 1 Score: 125 bits (314), Expect = 5.440e-30 Identity = 82/247 (33.20%), Postives = 123/247 (49.80%), Query Frame = 1
Query: 1 PSFKISNVFREMERQTGLSTDTFSLHLPDGMKVFDCDILGDVEIEDGDQLDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQRPLSNKLKQASATEQCEWSVHATPDGSLQDLSTGRAYPYLFWEADAVNGGVKQS-----FGLDETE-PFCVAGHAAGTARTVLMGV-----FLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
P+ ++ + + +G+ D L +G + D L +++GD L ++ Q+GGKPVI LYPP + + + L P W FSA+Y P+ K A ++ +W V A G+L ++ TG YL+WEA+ G+ G E PF + + TVL+ V +LD AL+ LGL R ITYWL L + A+ F+ + YE+AA L I TPDV R+FM F+
Sbjct: 149 PNARVQELMDVIRNASGICNDN-QRWLWEGQTLMPYDTLSGSGVKEGDTLAMVERQTGGKPVIYLYPPTATRISATLCLVPEWEFSAIY--PVV-PAKTTEAGQELKWVVDAERSGTLTEVGTGLEVSYLYWEAETTAKGLVSPPLSLVLGATTAEAPFVPNQASLDSKDTVLLEVAKMTQYLDGALKALGLHVEARTSFITYWLPSLLKHDYVALRFLPQSVYERAAPLAIEPTPDVVARIFMLFK 391
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: A0A146HXL2_MYCCL (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HXL2_MYCCL) HSP 1 Score: 127 bits (319), Expect = 8.160e-30 Identity = 85/219 (38.81%), Postives = 115/219 (52.51%), Query Frame = 1
Query: 85 DGMKVFDCDILGDVEIEDGDQLDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQRPLSNKLKQASATEQCEWSVHATPDGSLQDLSTGRAYPYLFWEA--DAVNGGVK--QSFGLDETEPF--CVAGHAAGTARTVLMGV-----FLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
DG ++ + I+G ++EDGD L++L+ Q GGKPVI L P L ATV V L P WSFSALY + K + W+V DG++ D ++G YLFWEA + +G + QS L + F +A A A +V + V +LD+AL LGL R ITYWL + F+ + YE AA L+I +PDV RVFM FR
Sbjct: 1841 DGRRLEEHHIVGSYDMEDGDVLEMLIQQKGGKPVIYLRAPEELDATVEVSLVPDWSFSALYPVVPTTTPKSPHLHQSARWNVKTALDGTMLDKTSGVQVSYLFWEALTNFPSGQLSPPQSPVLGPSGTFRPALAKDAFRYASSVALDVPDAPLYLDAALLDLGLDTEARTSFITYWLPSFLHHKHVLLSFIPQSSYEAAAPLSISPSPDVVTRVFMIFR 2059
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: A0A409YS31_9AGAR (Uncharacterized protein n=1 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409YS31_9AGAR) HSP 1 Score: 124 bits (312), Expect = 6.110e-29 Identity = 83/252 (32.94%), Postives = 118/252 (46.83%), Query Frame = 1
Query: 4 SFKISNVFREMERQTGLSTDTFSLHLPDGMKVFDCDILGDVEIEDGDQLDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQRPLSNKLKQASATEQCEWSVHATPDGSLQDLSTGRAYPYLFWEADA------------VNGGVKQSFGLDETEPFCVAGHAAGTARTVLMGV-----FLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
+++++N+ +TG+ D + L DG + D+ +ED ++D L V GGKPVI L+ P PL+A++ + L P WSFSA+Y + K K + E+ W V P G L +L+TG YLFWEA V + E F +V++ V +LD L LGL R ITYWL + A F+ A YE+AA L + PDVT RVFM F+
Sbjct: 155 TYRLANLLPVFASRTGMCEDDWRLFY-DGSMISYNQTPADLGMEDNAEIDCLKVLIGGKPVIYLFSPNPLEASIQLSLVPQWSFSAVYP-VVPVKPKAERSNEEISWRVQVRPTGELTELTTGLEVAYLFWEAHTNTSKPPTPPPSPVADSSSPGAAASDVEAFIPNEATLRDDDSVVISVDKITPYLDKTLSALGLHTEARTSFITYWLPAMLKHKNIAFRFLAQASYERAAPLEVHPPPDVTTRVFMLFQ 404
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Match: UPI0004449FEF (hypothetical protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI0004449FEF) HSP 1 Score: 122 bits (306), Expect = 8.900e-29 Identity = 82/215 (38.14%), Postives = 103/215 (47.91%), Query Frame = 1
Query: 112 ILGDVEIEDGDQ----LDLLLVQSGGKPVILLYPPAPLKATVAVKLSPLWSFSALYQRPLSNKLKQASATEQCEWSVHATPDGSLQDLSTGRAYPYLFWEADAVNGGVKQSFGLD-------ETEPFCVAGHAAGTARTVLMGV-----FLDSALQRLGLSARKRCDMITYWLAQLESSAFYAIYFVQTARYEQAARLTIVATPDVTIRVFMAFR 708
++GDV E + +D+ VQSGGKPVI L+ P + ATV + L P W FSA+Y P+ E+ W V DGSL + +TG YLFWEA N G S TE FC G +V++ V +LD AL LGL R ITYWL A+ FV A YE+AA L + PDV RVFM F+
Sbjct: 194 VVGDVLWEKDEDYPLTIDIFPVQSGGKPVIYLFSPMEMDATVNLSLVPSWKFSAIY--PVVPTKISVLGDERLSWKVRTHADGSLLEKTTGLDVAYLFWEAHT-NAGAPPSPPSSPLPGQNASTERFCPIGSNLYDHNSVVLPVASLTPYLDKALMSLGLHTEARTSFITYWLPSFLKHTHIALRFVPQAAYERAAPLDVSPVPDVITRVFMLFK 405 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig141.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig141.14.1 >prot_P-littoralis_Contig141.14.1 ID=prot_P-littoralis_Contig141.14.1|Name=mRNA_P-littoralis_Contig141.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=240bp PSFKISNVFREMERQTGLSTDTFSLHLPDGMKVFDCDILGDVEIEDGDQLback to top mRNA from alignment at P-littoralis_Contig141:99078..100311+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig141.14.1 ID=mRNA_P-littoralis_Contig141.14.1|Name=mRNA_P-littoralis_Contig141.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1234bp|location=Sequence derived from alignment at P-littoralis_Contig141:99078..100311+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig141:99078..100311+ >mRNA_P-littoralis_Contig141.14.1 ID=mRNA_P-littoralis_Contig141.14.1|Name=mRNA_P-littoralis_Contig141.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=720bp|location=Sequence derived from alignment at P-littoralis_Contig141:99078..100311+ (Pylaiella littoralis U1_48)back to top |