prot_P-littoralis_Contig141.11.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig141.11.2
Unique Nameprot_P-littoralis_Contig141.11.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length216
Homology
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A6H5JQ33_9PHAE (MRP-S28 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ33_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 9.810e-69
Identity = 133/206 (64.56%), Postives = 141/206 (68.45%), Query Frame = 0
Query:   10 LLRACPAAARRTGTAKGAGVAAAAPALRPSLRVVMVSCYSVAAGSRPXXXXXXXXXXXXXXXXXXXXRPGGDEDGDSSEGGVRQAGHGGGGMSGHPLPPRTVPDDILGFSCRTYMAGDSDDRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEARNVEDEAA 215
            L RA PAAARR GTA     AAAA    P   V ++   + A G R                     R GGDED  S E          G MSG PLPPRTVPDDILGFSCRTYMAGDSD+RYPNAHGVHPAEFKVEL VPVP LGL+ +EEERLIQIVGPRY E +QVLRLVSDRFPNRIDNKRYLVHLLENILVEARNV+DE A
Sbjct:    9 LARALPAAARRAGTA---ATAAAASRRCPHPAVYVLRPAAAAEGVR---------GSGVLFSSMSASRAGGDED--SMEXXXXX-----GAMSGQPLPPRTVPDDILGFSCRTYMAGDSDERYPNAHGVHPAEFKVELRVPVPLLGLAPAEEERLIQIVGPRYLERQQVLRLVSDRFPNRIDNKRYLVHLLENILVEARNVDDEEA 195          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: D7FTB0_ECTSI (MRP-S28 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB0_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 4.690e-61
Identity = 101/137 (73.72%), Postives = 108/137 (78.83%), Query Frame = 0
Query:  101 MSGHPLPPRTVPDDILGFSCRTYMAGDSDDRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNK----------------------RYLVHLLENILVEARNVEDEAA 215
            MSG PLPPRTVPDDILGFSCRTYMAGD+D+RYPNAHGVHPAEFKVEL VPVP LGL+ +EEERLIQIVGPRY E +QVLRLVSDRFPNRIDNK                      RYLVHLLENILVEARN++DE A
Sbjct:    1 MSGEPLPPRTVPDDILGFSCRTYMAGDADERYPNAHGVHPAEFKVELRVPVPLLGLAPAEEERLIQIVGPRYLERQQVLRLVSDRFPNRIDNKSAPETRLDMRTKAVVDNYLAFQRYLVHLLENILVEARNIDDEEA 137          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A836CGV1_9STRA (Ribosomal protein S24/S35, mitochondrial, conserved domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGV1_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.430e-30
Identity = 53/103 (51.46%), Postives = 78/103 (75.73%), Query Frame = 0
Query:  106 LPPRTVPDDILGFSCRTYMAGDSDDRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEAR 208
            LPPRT+P+++L F  RTY A D+ + YPN HGVH AEFKV L+V + +LGL  +++E+L ++ G R+ +  Q+LRL  + FP+R++NK+YLV+LLE +L EAR
Sbjct:   13 LPPRTIPEELLTFKARTYFASDTGNPYPNVHGVHLAEFKVVLSVRMEDLGLDRTQQEKLRKLAGLRFNKKEQILRLPCELFPSRVENKKYLVYLLETLLEEAR 115          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A6U1LR57_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LR57_9STRA)

HSP 1 Score: 110 bits (276), Expect = 9.410e-27
Identity = 54/109 (49.54%), Postives = 78/109 (71.56%), Query Frame = 0
Query:  106 LPPRTVPDDILGFSCRTYMAGDSDDRYPNA-HGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEARNVEDE 213
            LPPRTVP++ L F  RTY+ GD   ++P   HG+HP+EFKV + V + +LGL   +++RL  +VGPRY  ++  L LV +RF NRI+NK+Y V LLEN+L+EAR  +++
Sbjct:   85 LPPRTVPEEKLKFKVRTYIGGDQGIQWPGTPHGIHPSEFKVVMKVQLEDLGLDERQQQRLKFMVGPRYNPDKDELTLVVNRFLNRIENKKYAVFLLENLLIEARKDDND 193          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A7S2W1L2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1L2_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.570e-24
Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 0
Query:  106 LPPRTVPDDILGFSCRTYMAGDSD-DRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEAR 208
            LP RTVPD+ L F+ R+YM+   D    P  H +   EF+V L V + +LGL+  EEERL+ +VGPRY   ++ L+L ++RFPNR++NK+YL++LLEN+L+EAR
Sbjct:   71 LPERTVPDEALLFTGRSYMSAGRDVPSLPEQHRI--GEFRVSLQVKLRDLGLAPEEEERLLIMVGPRYNRKKRELKLTAERFPNRVENKKYLIYLLENLLLEAR 172          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A7S2CHN1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHN1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.110e-23
Identity = 55/109 (50.46%), Postives = 74/109 (67.89%), Query Frame = 0
Query:  106 LPPRTVPDDILGFSCRTYMAG-DSDDRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEARNVEDE 213
            LP RTVPD++L F+  T+M+        P  H V   E+KV L V + +L L+  EE RL+ +VGPRY      ++LVSDRFPNR++NKRY+V+LLENIL+EAR  ED+
Sbjct:   73 LPERTVPDELLQFTTCTHMSSIRHSPLIPEQHMV--GEYKVILKVKLADLALTREEERRLLVLVGPRYNWKTGEIKLVSDRFPNRVENKRYIVYLLENILLEARRNEDQ 179          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A7S3H6S6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6S6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.040e-12
Identity = 37/105 (35.24%), Postives = 66/105 (62.86%), Query Frame = 0
Query:  106 LPPRTVPDDILGFSCRTYMAGDSDDRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEARNV 210
            +P RTV DD+L F      +  S+  +P+    +PA+FK  L V + +L L+  E++  +++VG R R     ++L  ++FPNR++N++YL+  LE++L EA+N+
Sbjct:   66 IPERTVSDDVLKFEFTARFSSGSEFFHPHLR-TNPADFKTILKVLLEDLPLTKQEKQIFVRMVGKRIRVGNGEVKLTCNKFPNRLENRKYLIFQLESLLREAKNL 169          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A8H7BQ76_9FUNG (37S ribosomal protein S24, mitochondrial n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BQ76_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 1.270e-10
Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 0
Query:  106 LPPRTVPDDILGFSCRTYMAGDSDDRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEARNVEDEAA 215
            +PP +  D IL F   TY+ G+           HP E KV LTV V +L L+ +E  +L+ + GPRY  N   ++L S++FP+R  NK+Y+   L+ ++ EA+N  D  A
Sbjct:   65 VPPNS--DQILKFKTHTYL-GEG----------HPVERKVVLTVKVSDLKLNDTERHKLLLLAGPRYDVNTDEIKLSSEKFPHRKQNKKYVSDTLDKLVAEAKNTTDTFA 161          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A8H7QX41_9FUNG (MRP-S28 domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QX41_9FUNG)

HSP 1 Score: 66.6 bits (161), Expect = 8.920e-10
Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 0
Query:  113 DDILGFSCRTYMAGDSDDRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEARNVEDEAA 215
            D IL     TY+ G+           HP E K  L V V +L LSA+E+ + + + GPRY  N + L + S+RFP+R  NK+YL+ +L  ++VEA++ +D  A
Sbjct:   93 DQILRIKSHTYV-GEG----------HPVEKKAVLNVKVSDLKLSATEKHKFLLLSGPRYNVNTEELVMSSERFPHRKQNKKYLLDVLNKLIVEAKDTKDTFA 184          
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Match: A0A7R9ZEZ3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZEZ3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.970e-9
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0
Query:  111 VPDDILGFSCRTYMAGDSDDRYPNAHGVHPAEFKVELTVPVPELGLSASEEERLI-QIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLLENILVEARNVEDEAA 215
            +P+D L F  RT   G    RY     ++PAE K+ + V + ++ L +  E  +  QIVGPR+ + RQ L+L S  F +RI+NKR+LV +LE I+   + +  E A
Sbjct:   29 IPEDKLMF--RTVSYG----RYLQEPYINPAEHKITMIVNLRDIPLESDLEHEIFHQIVGPRFMQKRQQLKLTSGVFASRIENKRHLVSMLERIVAHTKRLAKEVA 128          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig141.11.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JQ33_9PHAE9.810e-6964.56MRP-S28 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FTB0_ECTSI4.690e-6173.72MRP-S28 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CGV1_9STRA7.430e-3051.46Ribosomal protein S24/S35, mitochondrial, conserve... [more]
A0A6U1LR57_9STRA9.410e-2749.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2W1L2_9STRA3.570e-2450.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CHN1_9STRA4.110e-2350.46Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3H6S6_9STRA2.040e-1235.24Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8H7BQ76_9FUNG1.270e-1037.2737S ribosomal protein S24, mitochondrial n=1 Tax=A... [more]
A0A8H7QX41_9FUNG8.920e-1037.86MRP-S28 domain-containing protein n=1 Tax=Mucor sa... [more]
A0A7R9ZEZ3_9STRA2.970e-937.74Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019349Ribosomal protein S24/S35, mitochondrial, conserved domainPFAMPF10213MRP-S28coord: 131..213
e-value: 3.6E-14
score: 53.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..112
IPR039848Ribosomal protein S24/S35, mitochondrialPANTHERPTHR13490MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28coord: 138..212

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig141contigP-littoralis_Contig141:35975..49178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig141.11.2mRNA_P-littoralis_Contig141.11.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig141 34943..49570 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig141.11.2 ID=prot_P-littoralis_Contig141.11.2|Name=mRNA_P-littoralis_Contig141.11.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=216bp
MFGVASRVALLRACPAAARRTGTAKGAGVAAAAPALRPSLRVVMVSCYSV
AAGSRPPTTAGGGGGGGERFSSMTASRPGGDEDGDSSEGGVRQAGHGGGG
MSGHPLPPRTVPDDILGFSCRTYMAGDSDDRYPNAHGVHPAEFKVELTVP
VPELGLSASEEERLIQIVGPRYRENRQVLRLVSDRFPNRIDNKRYLVHLL
ENILVEARNVEDEAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019349Ribosomal_S24/S35_mit
IPR039848Ribosomal_S24/S35