mRNA_P-littoralis_Contig1406.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A2D8LND4_9FLAO (3-oxoadipyl-CoA thiolase n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LND4_9FLAO) HSP 1 Score: 340 bits (871), Expect = 2.810e-112 Identity = 181/206 (87.86%), Postives = 184/206 (89.32%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVK 558
ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIK+GDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQE YGTDGMG TAENLVEK+NISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ +ILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVK
Sbjct: 68 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKAGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQEFYGTDGMGVTAENLVEKHNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQRKKDPIVFKDDEFVKPNTTKEILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVK 273
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A2E2W799_9FLAO (3-oxoadipyl-CoA thiolase n=5 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A2E2W799_9FLAO) HSP 1 Score: 332 bits (850), Expect = 4.220e-109 Identity = 175/209 (83.73%), Postives = 182/209 (87.08%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKNTN 567
ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIK+GDGDVFI+GGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQE+YGTDGMG TAENLVEK+NISREDQDAFAY SQMKA AQ+NGRLAKEIV VEIPQ ++LAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVK N
Sbjct: 68 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKAGDGDVFISGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQEIYGTDGMGVTAENLVEKHNISREDQDAFAYHSQMKATKAQENGRLAKEIVPVEIPQRKKDPIVFKEDEFIRPNTTKEVLAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKKYN 276
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A370Q609_9FLAO (3-oxoadipyl-CoA thiolase n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A370Q609_9FLAO) HSP 1 Score: 331 bits (849), Expect = 5.790e-109 Identity = 176/209 (84.21%), Postives = 182/209 (87.08%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKNTN 567
ARMSLLLAGLP+TVPGETVNRLCSSGLSAIIHANRAIK+GDGDVFI+GGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMG TAENLVEK+NISREDQDAFAY SQMKA AQK+GRLAKEIV VEIPQ +ILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVK N
Sbjct: 67 ARMSLLLAGLPYTVPGETVNRLCSSGLSAIIHANRAIKAGDGDVFISGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGVTAENLVEKHNISREDQDAFAYHSQMKATEAQKSGRLAKEIVPVEIPQRKKDPIIFKEDEFIKPTTTKEILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKKYN 275
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A6G6GPA2_9FLAO (3-oxoadipyl-CoA thiolase n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GPA2_9FLAO) HSP 1 Score: 325 bits (834), Expect = 1.110e-106 Identity = 172/211 (81.52%), Postives = 181/211 (85.78%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKNTN*N 573
ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIK+GDGD+FIAGGVENMTRGP+VI+K +S FGNDSKMYDSSFGWRF+NPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAY SQMKA+ AQ+NGRLAKEI V IPQ +ILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVK N N
Sbjct: 68 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKAGDGDIFIAGGVENMTRGPYVIAKPSSAFGNDSKMYDSSFGWRFVNPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYHSQMKASKAQQNGRLAKEIAPVSIPQRKKDPIVFAQDEFIKPGTTKEILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKKYNLN 278
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A7Y2A6R9_9FLAO (3-oxoadipyl-CoA thiolase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y2A6R9_9FLAO) HSP 1 Score: 321 bits (823), Expect = 5.260e-105 Identity = 169/209 (80.86%), Postives = 180/209 (86.12%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKNTN 567
ARMSLLLAGLPF+VPGETVNRLCSSGLSAIIHANRAIK+GDGD+FIAGGVENMTRGP+VISKSASP+GNDSKMYDSSFGWRF+NPKMQELYGTDGMG TAENLVEKY ISREDQD FAY SQMKAA AQ++GR KEIVAVEIPQ +ILAKLRPAFKKEGGSVTAGNASGLNDGAAAT+IASE+AVK N
Sbjct: 67 ARMSLLLAGLPFSVPGETVNRLCSSGLSAIIHANRAIKAGDGDLFIAGGVENMTRGPYVISKSASPYGNDSKMYDSSFGWRFVNPKMQELYGTDGMGTTAENLVEKYQISREDQDEFAYRSQMKAAKAQRDGRFKKEIVAVEIPQRKKDPIVFSEDEFIKPNTSKEILAKLRPAFKKEGGSVTAGNASGLNDGAAATLIASEEAVKRYN 275
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A7Y1XQ21_9FLAO (3-oxoadipyl-CoA thiolase n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7Y1XQ21_9FLAO) HSP 1 Score: 318 bits (814), Expect = 1.100e-103 Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKNTN 567
ARM+LLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIK+GDGD+FI+GGVENMTRGP+VI+K++S FGNDSK+YDSSFGWRFINPKM ELYGTDGMGNTAENLV+K+NISREDQDAFAY SQMKAA AQ+NGRLAKEIV VEIPQ +ILAKLRPAFKKEGGSVTAGN+SGLNDGAAATI+ASE+AVK N
Sbjct: 68 ARMALLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKAGDGDLFISGGVENMTRGPYVIAKASSAFGNDSKLYDSSFGWRFINPKMHELYGTDGMGNTAENLVDKFNISREDQDAFAYWSQMKAAKAQENGRLAKEIVPVEIPQRKRDPIIFSKDEFVKPNTTKEILAKLRPAFKKEGGSVTAGNSSGLNDGAAATIVASEEAVKEYN 276
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A520Z4M5_9FLAO (3-oxoadipyl-CoA thiolase n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A520Z4M5_9FLAO) HSP 1 Score: 317 bits (813), Expect = 1.550e-103 Identity = 165/206 (80.10%), Postives = 180/206 (87.38%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVK 558
ARM+LLLAGLPFTVPGETVNRLCSSGLSA+IHANRAIKSGDGD+ I+GGVENMTRGP+VI+K +S FGNDSKMYDSSFGWRF+NP+MQELYGTDGMGNTAENLV KYNISREDQDAFAY SQMKAA AQ+NGRLAKEIV+VEIPQ +ILAKLRPAFKKEGGSVTAGN+SGLNDGAAATIIASE+A+K
Sbjct: 68 ARMALLLAGLPFTVPGETVNRLCSSGLSAMIHANRAIKSGDGDILISGGVENMTRGPYVIAKPSSAFGNDSKMYDSSFGWRFVNPRMQELYGTDGMGNTAENLVAKYNISREDQDAFAYCSQMKAAKAQENGRLAKEIVSVEIPQRKKDPISFLKDEFVKPNTTKEILAKLRPAFKKEGGSVTAGNSSGLNDGAAATIIASEEAIK 273
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A661Y4T5_9BACT (3-oxoadipyl-CoA thiolase n=4 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661Y4T5_9BACT) HSP 1 Score: 317 bits (813), Expect = 1.650e-103 Identity = 167/206 (81.07%), Postives = 179/206 (86.89%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVK 558
ARM+LLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGD+FI+GGVENMTRGP+VISK ++ FGNDSKMYDSSFGWRFINPKM+ +YGT+GMGNTAENLVEKYNI+REDQD FAY SQMKAA AQKNGRLAKEIVAVEIPQ +ILAKLRPAFKKEGGSVTAGNASGLNDGA ATIIASE+AVK
Sbjct: 68 ARMALLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDLFISGGVENMTRGPYVISKPSAAFGNDSKMYDSSFGWRFINPKMETMYGTEGMGNTAENLVEKYNITREDQDGFAYWSQMKAAEAQKNGRLAKEIVAVEIPQRKRDPIVFANDEFIKPGTTKEILAKLRPAFKKEGGSVTAGNASGLNDGAVATIIASEEAVK 273
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A497CIK6_9BACT (3-oxoadipyl-CoA thiolase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A497CIK6_9BACT) HSP 1 Score: 317 bits (811), Expect = 3.120e-103 Identity = 165/209 (78.95%), Postives = 179/209 (85.65%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKNTN 567
ARM+LLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIK+GDGD+FI+GGVENMTRGP+VISKS+S FGNDSKMYDSSFGWRF+NP+MQ+LYGTDGMGNTAENLVEKYNISREDQDAFAY SQMKA AQKNGRLAKEI+ VEIPQ ++L KLR AFK EGGS+TAGN+SGLNDGAAATIIASEDAVK N
Sbjct: 68 ARMALLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKAGDGDLFISGGVENMTRGPYVISKSSSAFGNDSKMYDSSFGWRFVNPRMQKLYGTDGMGNTAENLVEKYNISREDQDAFAYWSQMKATKAQKNGRLAKEIIEVEIPQRKKDSLQFSKDEFVKPTTTLEVLGKLRAAFKTEGGSITAGNSSGLNDGAAATIIASEDAVKKYN 276
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Match: A0A2G2Q5T7_FLASP (Acetyl-CoA C-acyltransferase n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A2G2Q5T7_FLASP) HSP 1 Score: 317 bits (811), Expect = 3.120e-103 Identity = 168/209 (80.38%), Postives = 179/209 (85.65%), Query Frame = 1
Query: 1 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENMTRGPWVISKSASPFGNDSKMYDSSFGWRFINPKMQELYGTDGMGNTAENLVEKYNISREDQDAFAYSSQMKAAAAQKNGRLAKEIVAVEIPQ--------------------QILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEDAVKNTN 567
ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIK+GDGD+FIAGGVENMTRGP+VISK++S FGNDSKMYDSSFGWRF+N KM LYGT+GMGNTAENLVEKYNISREDQDAFAY SQMKA AQ+NGRLAKEI++VEIPQ +ILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASE AVK N
Sbjct: 67 ARMSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKAGDGDLFIAGGVENMTRGPYVISKTSSAFGNDSKMYDSSFGWRFVNKKMDALYGTEGMGNTAENLVEKYNISREDQDAFAYWSQMKATEAQQNGRLAKEIISVEIPQRKKDPIIFKDDEFIKPTTSKEILAKLRPAFKKEGGSVTAGNASGLNDGAAATIIASEAAVKKYN 275 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1406.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1406.5.1 >prot_P-littoralis_Contig1406.5.1 ID=prot_P-littoralis_Contig1406.5.1|Name=mRNA_P-littoralis_Contig1406.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=188bp MSLLLAGLPFTVPGETVNRLCSSGLSAIIHANRAIKSGDGDVFIAGGVENback to top mRNA from alignment at P-littoralis_Contig1406:14738..15734+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1406.5.1 ID=mRNA_P-littoralis_Contig1406.5.1|Name=mRNA_P-littoralis_Contig1406.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=997bp|location=Sequence derived from alignment at P-littoralis_Contig1406:14738..15734+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1406:14738..15734+ >mRNA_P-littoralis_Contig1406.5.1 ID=mRNA_P-littoralis_Contig1406.5.1|Name=mRNA_P-littoralis_Contig1406.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=564bp|location=Sequence derived from alignment at P-littoralis_Contig1406:14738..15734+ (Pylaiella littoralis U1_48)back to top |