prot_P-littoralis_Contig140.51.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig140.51.1
Unique Nameprot_P-littoralis_Contig140.51.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length100
Homology
BLAST of mRNA_P-littoralis_Contig140.51.1 vs. uniprot
Match: A0A6H5K0D2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D2_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 2.780e-57
Identity = 83/99 (83.84%), Postives = 94/99 (94.95%), Query Frame = 0
Query:    1 MAFRMTGRVLGALAKERNDVQPALRKVWKAHEHIDGLVIRSISPYQLNLVETWVRSVPKKLKTRFIEYGPEVLMSMGLIYGTYTSHKKGFAQLHKDHRD 99
            MAFRMTGRVLGA+A+ERNDVQPALRKVWKA+E +DGLVIRSISPYQLNLV  +V ++PKKLKTRFIEYGPEV+M +G++YGTYTSHKKGFAQLHKDHRD
Sbjct:    1 MAFRMTGRVLGAVARERNDVQPALRKVWKAYEPVDGLVIRSISPYQLNLVRNFVTTIPKKLKTRFIEYGPEVMMCVGIVYGTYTSHKKGFAQLHKDHRD 99          
BLAST of mRNA_P-littoralis_Contig140.51.1 vs. uniprot
Match: D7G6P4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6P4_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 4.400e-16
Identity = 35/40 (87.50%), Postives = 38/40 (95.00%), Query Frame = 0
Query:    1 MAFRMTGRVLGALAKERNDVQPALRKVWKAHEHIDGLVIR 40
            MAFRMTGRVLGA+A+ERNDVQPALRKVWKAHE +DGLV R
Sbjct:    1 MAFRMTGRVLGAVARERNDVQPALRKVWKAHEPVDGLVSR 40          
BLAST of mRNA_P-littoralis_Contig140.51.1 vs. uniprot
Match: A0A6V1P0L7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P0L7_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 1.140e-13
Identity = 36/107 (33.64%), Postives = 60/107 (56.07%), Query Frame = 0
Query:    1 MAFRMTGRVLGAL--------AKERNDVQPALRKVWKAHEHIDGLVIRSISPYQLNLVETWVRSVPKKLKTRFIEYGPEV---LMSMGLIYGTYTSHKKGFAQLHKD 96
            MA R T  V G +        A ERND+QP L+K WK    +DG+V +S+SP++  +V+ W++++P K+K + ++  P     L+ + +  G   S KK  +  H+D
Sbjct:    1 MALRRTLAVGGPVRRSFAAMFAAERNDIQPQLKKWWKGTPQMDGVVTQSLSPFEQQIVQPWIKTIPDKIKKKIVDDFPPTIPALIFVAITLGYCESEKKRLSMEHRD 107          
BLAST of mRNA_P-littoralis_Contig140.51.1 vs. uniprot
Match: A0A2R5GU00_9STRA (Cytochrome b-c1 complex subunit 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GU00_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.070e-10
Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   13 LAKERNDVQPALRKVWKAHEHIDGLVIRSISPYQLNLVETWVRSVPKKLKTRF----IEYGPEVLMSMGLIYGTYTSHKKGFAQLHKDHRD 99
            +A    +V P L K+WK ++ I+GLV R++SPYQ + +  WV++ P+K+K +      + GP VL+    ++GT       F    K HRD
Sbjct:    1 MAPPMKNVHPGLAKLWKKYKPINGLVTRTVSPYQQDFITPWVKTWPEKMKHKISDNLFDVGPGVLV----LFGTVAWADATFESEMKKHRD 87          
BLAST of mRNA_P-littoralis_Contig140.51.1 vs. uniprot
Match: A0A835ZEE9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE9_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.360e-6
Identity = 27/82 (32.93%), Postives = 43/82 (52.44%), Query Frame = 0
Query:    1 MAFRMTGRVLGALAKERNDVQPALRKVWKAHEHIDGLVIRSISPYQLNLVETWVRSVPKKLKTRFIEYGPEVLMSMGLIYGT 82
            MAFR +     A  K   +V PAL K W  +  +DG V R +SP Q+ ++     + P K+  +   +GP V+ +  ++YGT
Sbjct:    1 MAFRRSTAAF-ATHKPGPEVHPALVKFWSKYSSVDGEVTRHLSPNQIRIMMPLYEAAPAKMARKMKNFGPYVVGTFLMVYGT 81          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.51.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K0D2_9PHAE2.780e-5783.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6P4_ECTSI4.400e-1687.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6V1P0L7_HETAK1.140e-1333.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2R5GU00_9STRA2.070e-1035.16Cytochrome b-c1 complex subunit 8 n=1 Tax=Hondaea ... [more]
A0A835ZEE9_9STRA1.360e-632.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyGENE3D1.20.5.210coord: 26..99
e-value: 1.1E-5
score: 27.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig140contigP-littoralis_Contig140:238324..242033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig140.51.1mRNA_P-littoralis_Contig140.51.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig140 238324..242033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig140.51.1 ID=prot_P-littoralis_Contig140.51.1|Name=mRNA_P-littoralis_Contig140.51.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
MAFRMTGRVLGALAKERNDVQPALRKVWKAHEHIDGLVIRSISPYQLNLV
ETWVRSVPKKLKTRFIEYGPEVLMSMGLIYGTYTSHKKGFAQLHKDHRD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036642Cyt_bc1_su8_sf