mRNA_P-littoralis_Contig140.36.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig140.36.1
Unique NamemRNA_P-littoralis_Contig140.36.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A6H5L4S8_9PHAE (SpoU_sub_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4S8_9PHAE)

HSP 1 Score: 496 bits (1276), Expect = 2.050e-168
Identity = 273/346 (78.90%), Postives = 291/346 (84.10%), Query Frame = 2
Query:   56 MSVAFNSGPAGAPLARIIATFFAARAARPAVNSSVVSR---------ATSTSTLPYGLWRPRYCDGAESGRSRDDIELDITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGGLTPTLVMVSPEALCASPGPRLQAALETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQRLVAER 1066
            MSVAFNSGP+ APLAR+IA F A+RA RP   SS   R         A + S+LPYGLWR R               LDITS++N KVK MR+FHKRRTR+DGGKILAEGHRLVCDLIEGGLTPTLV+    AL ASPGPRLQAALETL ADVV+VAPAEVVQRCCDTVTSQGVVALV+RPVLPLP T+QTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTG+CVDYWAPKTVRASMGASFRLPSLRLESW EVVELMRARG+ +YAA+GG+RLSHFDADWTSPSALVVGAEARGL DAARL LESG I GVSVPL G  ESLNAAVAGAIVLGEAQRQRLVAER
Sbjct:    1 MSVAFNSGPSAAPLARMIAAFVASRAGRPPSASSRDGRGGIRDRGIRAAAMSSLPYGLWRDR------------GGTLDITSARNPKVKLMRSFHKRRTRDDGGKILAEGHRLVCDLIEGGLTPTLVI----ALRASPGPRLQAALETLSADVVAVAPAEVVQRCCDTVTSQGVVALVERPVLPLPPTMQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGSCVDYWAPKTVRASMGASFRLPSLRLESWQEVVELMRARGIRMYAADGGARLSHFDADWTSPSALVVGAEARGLSDAARLELESGGIAGVSVPLEGGVESLNAAVAGAIVLGEAQRQRLVAER 330          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A835Z4A7_9STRA (tRNA/rRNA methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4A7_9STRA)

HSP 1 Score: 300 bits (767), Expect = 4.440e-93
Identity = 160/290 (55.17%), Postives = 211/290 (72.76%), Query Frame = 2
Query:  182 STLPYGLWRPRYCDGAESGRSRDDIELDITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGGLTPTLVMVSPEALCASPGPRLQAALETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQR 1051
            ST  + LWRP       SG    D+ LDITS  N ++K   T HKR++R+  G++L EG RLV D ++ GL+P LV+VSPEAL +  G  L A L+ L +DVV +A  + V R CDTV+ QGVVA+V RP+LPLP+T++  L+ DG+ DPGN+GT+VRTAA LG DAVV+TG CVD W+PK +RASMGA+FR+PS+   +W E  EL++ARG+++YAA+GG+  +H++  W+ PSALVVG+EA GL  AAR  L+ G I G+ +PL+   ESLNAAVAGAIVLGEAQRQR
Sbjct:    3 STEAFELWRP-----PGSG----DL-LDITSPTNPRIK---TLHKRKSRDSEGRVLVEGCRLVTDALKAGLSPDLVLVSPEALASPGGSALSALLQRLSSDVVCLASGDCVARACDTVSPQGVVAVVARPLLPLPETVRLALVLDGVSDPGNMGTMVRTAAALGVDAVVMTGACVDLWSPKALRASMGAAFRVPSVATGTWRETRELLQARGLALYAADGGAATAHWEVPWSKPSALVVGSEAEGLSQAAREDLDRGVITGIRIPLSNGVESLNAAVAGAIVLGEAQRQR 279          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A8J5X903_DIALT (SpoU_sub_bind domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X903_DIALT)

HSP 1 Score: 206 bits (523), Expect = 2.250e-57
Identity = 117/265 (44.15%), Postives = 159/265 (60.00%), Query Frame = 2
Query:  266 ITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGGLTPTLVMVSPEALCASPGPRLQAALETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLP--LPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDA-DWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQR 1051
            ITS +N  VK +R    RR RE  G +L EG RLV D ++ G     V+V+   L   PG  LQ  L  LPA VVS+A    +   C TV+ QG+VA V  P     LPD    VL+ D + DPGN+GTLVR AAG G DAVV  G C D W+PK +R++MG +FRLP +  + W ++   ++  G+ + AA+GG   S + A DW +P A+V+G+EA GL +A R  L +G +  V +P+A   +SLNAA+AG ++L E  RQR
Sbjct:   15 ITSGKNPVVKALRRLESRRHRERDGLLLLEGLRLVTDALDAGFCAETVLVAEALLAQQPG--LQRVLAALPAGVVSLADEAALAAACTTVSPQGIVAAVRMPERTGALPDAASLVLVLDNLSDPGNVGTLVRGAAGFGCDAVVALGACADAWSPKALRSAMGGTFRLPIVPAQEWAQLRAQLQRAGLRVLAADGGVAASDYAAVDWRAPLAVVIGSEATGLSEAVRADLAAGSVCAVGIPMAAGLDSLNAAMAGTVLLSECARQR 277          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A0P6YEI2_9CHLR (SpoU_sub_bind domain-containing protein n=2 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0P6YEI2_9CHLR)

HSP 1 Score: 192 bits (489), Expect = 6.720e-53
Identity = 117/265 (44.15%), Postives = 162/265 (61.13%), Query Frame = 2
Query:  266 ITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGGLT-PTLVMVSPEALCASPGPRLQAALETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQRLV 1057
            ITS  N +VK  R  H+RR RE  GKIL EG RLV D  + G+    L   S +A        +  AL +  A +VS    EV+Q   DTVT QG+VA+ +RP L  P +   +LI D ++DPGNLGTL+R AAG G + V+L    VD W+PK +RA MGA FRLP     +W+E+ + +   G+++Y A+    + +FD DWT+P+ L+VG E  G+G+AAR    +     V++PLA   ESLNAA+AG ++L EA+RQRL+
Sbjct:    4 ITSLANPRVKAARALHRRRMREREGKILLEGARLVHDAFQAGVAFEALFYTSDQAA------HIPEALRSC-AWLVSE---EVMQALSDTVTPQGIVAVAERPQLAWPTSATLLLIADNVRDPGNLGTLLRAAAGAGVEGVLLPKGTVDVWSPKVLRAGMGAHFRLPVRAGLTWEEIAQAVN--GLTVYVADARGAVRYFDVDWTAPTVLIVGGETEGIGEAARALAHTA----VAIPLAREVESLNAAMAGTVILFEARRQRLM 252          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A7S2B686_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2B686_9EUKA)

HSP 1 Score: 190 bits (483), Expect = 3.450e-52
Identity = 113/241 (46.89%), Postives = 145/241 (60.17%), Query Frame = 2
Query:  353 EGHRLVCDLIEGGLTPTLVMVSPEALCASPGPRLQAALETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHT------ESLNAAVAGAIVLGEAQRQRLV 1057
            EGHRLV D +  GL P  V++   AL +S G RL  AL  L  D V   PA +V++  DT T QGV+A++    LPLP     VL+CDGI DPGNLGTL+R+AAG G DAV+L   C D W  KT+R+ MGA FR+P   + +W +  +L+     +  AA+ G  L+H + DW   +AL+VG+EA GL DA R       +    VPLA         ESLNAAVAG++VL EAQRQR V
Sbjct:    1 EGHRLVLDALASGLQPEFVVIHDAALASSIGERLGTALAQLETDRVVRTPAHIVEQLSDTQTPQGVIAVLAHEPLPLPPAPTLVLVCDGISDPGNLGTLLRSAAGSGVDAVLLLPGCSDPWGLKTLRSGMGAQFRVPLQHMGTWADTSDLLADWSCTALAADAGGELAHDEVDWRRGAALIVGSEAHGLSDAVRA---DPSVQLCRVPLAEGLGASECLESLNAAVAGSVVLFEAQRQRRV 238          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: R7QT73_CHOCR (SpoU_sub_bind domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT73_CHOCR)

HSP 1 Score: 192 bits (487), Expect = 4.570e-52
Identity = 121/287 (42.16%), Postives = 168/287 (58.54%), Query Frame = 2
Query:  209 PRYCDGAESGRSRDDIELDITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGGLTPTLVMVSPEALCASPGPRLQAALETLPADV--VSVAP---AEVVQRC-CDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQR 1051
            PR+              L++TS++N  +K  R+  +RR R+    IL EG RL+ D +     P  +  S + L      R  AA+  L ADV     AP   AE + R  C+TV+ QGVVA+++RP LPLPD+    L+CD ++DPGN+GTL+R+AAG G DAV++T  C D W  K +RA MGA FRLP    +SWDEV++++   G  +  A+GG    +   DW  P+A+VVG EA G G+ A    + G +VG+  PL    ESLNAAVAG++VL E +RQR
Sbjct:   16 PRHLPHPTRALRTSRASLELTSARNPHLKLARSLLRRRHRDKNNLILLEGQRLIEDALSASFAPHQLFYSDKLL------RRSAAMGALLADVRRSGCAPMLVAEPIMRSLCNTVSPQGVVAVLERPALPLPDSGTLALVCDEVRDPGNVGTLLRSAAGAGVDAVLMTHGCADPWGLKVLRAGMGAHFRLPVQVDQSWDEVMQVVHKWGCEVSVADGGGE-DYAKVDWCGPAAIVVGGEANGPGERAFQEAQ-GRVVGI--PLCSGMESLNAAVAGSVVLFEVRRQR 292          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A7S0LQQ5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQQ5_9EUKA)

HSP 1 Score: 187 bits (474), Expect = 3.020e-50
Identity = 105/263 (39.92%), Postives = 156/263 (59.32%), Query Frame = 2
Query:  266 ITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGGLTPTLVMVSPEALCASPGPRLQAAL-ETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQR 1051
            ++S+ N ++K +R    +R R+  G ++ EGHRL+ D ++ G +   V++S EAL A  G RL  +L E L A+ +++AP  ++    DT T QGVV ++ +P L LP++   VL+ D I DPGNLGTL+R+AAG G ++ +L   C D W  K +RA MGA  RLP + +  + E   ++R  G    AA+      ++  DW  PSALVVG+EA GL +     L   D     +PLA   ESLNAA+AG++++ E  RQR
Sbjct:   33 LSSTSNPRIKLLRKLQAKRARDKSGLMILEGHRLLTDALDAGYSADFVLLSEEALHAPEGARLARSLREVLRAEQLAIAPQSLIAELSDTQTPQGVVGMLQQPRLALPESPSFVLVLDRISDPGNLGTLLRSAAGAGVESALLLSGCTDPWGLKALRAGMGAQLRLPLVEVRGYAEAAGMLRRWGCHGVAADARGETDYWAVDWRQPSALVVGSEAHGLAEEV---LSDVDTQLCRIPLANGVESLNAAIAGSVMMYEVGRQR 292          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A7C7US29_9CHLR (RNA methyltransferase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C7US29_9CHLR)

HSP 1 Score: 185 bits (470), Expect = 4.050e-50
Identity = 108/263 (41.06%), Postives = 159/263 (60.46%), Query Frame = 2
Query:  266 ITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGGLTPTLVMVSPEALCASPGPRLQAALETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLG-DAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQR 1051
            +TS+ N KVK++R+ H+RR R      + EG RLV + ++ G+ PTLV  +P+      G  L A +E LP +   V   +V++   DTV+ QG++A+V    LP P+    VL+ D ++DPGNLGT++R+A   GA+ V+LT   VD ++PK VR +MGA F LP     SW E+ E +  R + +  AEG     +++ DWT PSAL+VG+EA G G +A RL  E      + +P+ G  +SLN AVA +++L EA RQR
Sbjct:    1 MTSTANKKVKYVRSLHRRRVRHRERNFVVEGLRLVEEALKAGVVPTLVFFTPDLGSGRRGRELLAVIEDLPGECFVVTD-KVMRALSDTVSPQGILAVVPFLGLPFPENPWLVLVVDRVRDPGNLGTILRSAEAAGANQVILTPATVDVYSPKVVRGAMGAHFYLPIATRASWSEMAEALEGRQILLAEAEGEK--VYYEVDWTKPSALIVGSEAEGAGQEAGRLATER-----IVIPMQGRAKSLNVAVAASVILFEAARQR 255          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A1X6PKW2_PORUM (SpoU_sub_bind domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKW2_PORUM)

HSP 1 Score: 187 bits (474), Expect = 1.620e-49
Identity = 116/273 (42.49%), Postives = 160/273 (58.61%), Query Frame = 2
Query:  260 LDITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGG--LTPTLVMVSPEALCASPGPRLQAALETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQRLVAERLG 1072
            +++ S++N ++K +R   +RR RE  G +L EGHRLV D +       P   +V+     A   P L  A      D + VA  +VV   CDTVT QGVVA+V RP   +      +L  DG+ DPGN+GTL+R+AA  GAD VVLT  C D W+PK +RA MGA  RLP L     +EVV   R RG+ +  A+G + +++   DW +P+ LVVG EA G   +A L   + D+V  ++P+ G  ESLNAA+AG++VL EA+RQR  A   G
Sbjct:   90 VEVVSTRNPRIKAVRHLLRRRMREREGLLLLEGHRLVVDALGAARPAAPVHTVVATRQAAARLWPALSTATGVA-RDALLVATPDVVASVCDTVTPQGVVAVVGRPSTTVVPGSTLLLALDGVADPGNVGTLLRSAAAAGADGVVLTKGCADVWSPKALRAGMGAQLRLPVLAGLEPEEVVAWARGRGLRLRVADGSAVMAYDGVDWAAPTVLVVGGEAEG--PSAALLAAADDVV--AIPMLGEVESLNAAIAGSVVLYEARRQRSEASGSG 357          
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Match: A0A540V9T9_9CHLR (RNA methyltransferase n=1 Tax=Litorilinea aerophila TaxID=1204385 RepID=A0A540V9T9_9CHLR)

HSP 1 Score: 183 bits (464), Expect = 2.950e-49
Identity = 111/263 (42.21%), Postives = 156/263 (59.32%), Query Frame = 2
Query:  266 ITSSQNTKVKFMRTFHKRRTREDGGKILAEGHRLVCDLIEGGLTPTLVMVSPEALCASP-GPRLQAALETLPADVVSVAPAEVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVRTAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELMRARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGDIVGVSVPLAGHTESLNAAVAGAIVLGEAQRQR 1051
            ITS+ N ++K +R  H+RR R + G+IL EG RLV D  + G+ P +V+  PEA+       RL   L+    + ++ +P EV     DTVT QG++A+V  P  PLP     VLI D ++DPGN GTL+RTA   G D V+L    VD +  K +RA MGA FRLP    ESW+++ + +    + +Y AE  ++  +   DW  P+ALV+G EA G  DAAR    +     +++P+ G  ESLNAAVAGA++L EA RQR
Sbjct:    2 ITSTSNPRIKEIRKLHRRRHRHESGRILLEGVRLVEDATQAGVRPEMVLYVPEAVAGQERAARLLQQLQEQGVECLACSP-EVFASVSDTVTPQGILAVVPLPHRPLPSQPTLVLILDQVRDPGNAGTLLRTAEAAGVDLVLLAPGTVDPFNEKVIRAGMGAHFRLPLRICESWEQLAQQLPPEMI-LYRAEAEAQTPYDQVDWRRPAALVIGGEAAGPSDAARQRTHA-----IAIPMQGQVESLNAAVAGAVILFEAARQR 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4S8_9PHAE2.050e-16878.90SpoU_sub_bind domain-containing protein n=2 Tax=Ec... [more]
A0A835Z4A7_9STRA4.440e-9355.17tRNA/rRNA methyltransferase n=1 Tax=Tribonema minu... [more]
A0A8J5X903_DIALT2.250e-5744.15SpoU_sub_bind domain-containing protein n=1 Tax=Di... [more]
A0A0P6YEI2_9CHLR6.720e-5344.15SpoU_sub_bind domain-containing protein n=2 Tax=Ar... [more]
A0A7S2B686_9EUKA3.450e-5246.89Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
R7QT73_CHOCR4.570e-5242.16SpoU_sub_bind domain-containing protein n=1 Tax=Ch... [more]
A0A7S0LQQ5_9EUKA3.020e-5039.92Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7C7US29_9CHLR4.050e-5041.06RNA methyltransferase n=1 Tax=Anaerolineae bacteri... [more]
A0A1X6PKW2_PORUM1.620e-4942.49SpoU_sub_bind domain-containing protein n=1 Tax=Po... [more]
A0A540V9T9_9CHLR2.950e-4942.21RNA methyltransferase n=1 Tax=Litorilinea aerophil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig140contigP-littoralis_Contig140:190434..197706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLV7
Preferred nameRNMTL1
PFAMsSpoU_methylase
Model size2119
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC02723,RC02817
KEGG koko:K00140,ko:K03437,ko:K03768,ko:K20095
KEGG ReactionR00705,R00706,R00922,R00935
KEGG Pathwayko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200
KEGG ModuleM00013
Hectar predicted targeting categorymitochondrion
GOsGO:0000154,GO:0000451,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
Exons7
Evalue3.27e-177
EggNOG OGsCOG0566@1|root,KOG2506@2759|Eukaryota
Ec32 ortholog descriptiontRNA/rRNA methyltransferase, SpoU type
Ec32 orthologEc-26_001080.1
EC1.2.1.18,1.2.1.27,5.2.1.8
DescriptionRNA methyltransferase activity
Cds size1083
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03016,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig140.36.1prot_P-littoralis_Contig140.36.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig140 191415..197651 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789655.5956662-UTR-P-littoralis_Contig140:190433..1914141680789655.5956662-UTR-P-littoralis_Contig140:190433..191414Pylaiella littoralis U1_48UTRP-littoralis_Contig140 190434..191414 -
1680789655.6771014-UTR-P-littoralis_Contig140:197651..1977061680789655.6771014-UTR-P-littoralis_Contig140:197651..197706Pylaiella littoralis U1_48UTRP-littoralis_Contig140 197652..197706 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789655.6073081-CDS-P-littoralis_Contig140:191414..1916381680789655.6073081-CDS-P-littoralis_Contig140:191414..191638Pylaiella littoralis U1_48CDSP-littoralis_Contig140 191415..191638 -
1680789655.6164222-CDS-P-littoralis_Contig140:192176..1922931680789655.6164222-CDS-P-littoralis_Contig140:192176..192293Pylaiella littoralis U1_48CDSP-littoralis_Contig140 192177..192293 -
1680789655.6272376-CDS-P-littoralis_Contig140:192849..1929611680789655.6272376-CDS-P-littoralis_Contig140:192849..192961Pylaiella littoralis U1_48CDSP-littoralis_Contig140 192850..192961 -
1680789655.6364858-CDS-P-littoralis_Contig140:193637..1936901680789655.6364858-CDS-P-littoralis_Contig140:193637..193690Pylaiella littoralis U1_48CDSP-littoralis_Contig140 193638..193690 -
1680789655.6455355-CDS-P-littoralis_Contig140:194344..1945521680789655.6455355-CDS-P-littoralis_Contig140:194344..194552Pylaiella littoralis U1_48CDSP-littoralis_Contig140 194345..194552 -
1680789655.654241-CDS-P-littoralis_Contig140:195568..1956891680789655.654241-CDS-P-littoralis_Contig140:195568..195689Pylaiella littoralis U1_48CDSP-littoralis_Contig140 195569..195689 -
1680789655.663197-CDS-P-littoralis_Contig140:197403..1976511680789655.663197-CDS-P-littoralis_Contig140:197403..197651Pylaiella littoralis U1_48CDSP-littoralis_Contig140 197404..197651 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig140.36.1

>prot_P-littoralis_Contig140.36.1 ID=prot_P-littoralis_Contig140.36.1|Name=mRNA_P-littoralis_Contig140.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=361bp
MSVAFNSGPAGAPLARIIATFFAARAARPAVNSSVVSRATSTSTLPYGLW
RPRYCDGAESGRSRDDIELDITSSQNTKVKFMRTFHKRRTREDGGKILAE
GHRLVCDLIEGGLTPTLVMVSPEALCASPGPRLQAALETLPADVVSVAPA
EVVQRCCDTVTSQGVVALVDRPVLPLPDTLQTVLICDGIQDPGNLGTLVR
TAAGLGADAVVLTGTCVDYWAPKTVRASMGASFRLPSLRLESWDEVVELM
RARGVSIYAAEGGSRLSHFDADWTSPSALVVGAEARGLGDAARLGLESGD
IVGVSVPLAGHTESLNAAVAGAIVLGEAQRQRLVAERLGGAGGEGRGGAA
GESGRRGVAQ*
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mRNA from alignment at P-littoralis_Contig140:190434..197706-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig140.36.1 ID=mRNA_P-littoralis_Contig140.36.1|Name=mRNA_P-littoralis_Contig140.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7273bp|location=Sequence derived from alignment at P-littoralis_Contig140:190434..197706- (Pylaiella littoralis U1_48)
GAGAACCGCCGTCCACACGGCAGTTCCCGCGACAGCAGCGACGGTTGCAG CCACAATGAGCGTTGCTTTCAACAGTGGACCGGCAGGCGCGCCGCTGGCA AGAATAATCGCGACATTTTTCGCGGCCCGCGCCGCGCGACCAGCTGTCAA CAGCAGTGTCGTTTCGAGAGCAACGTCAACATCAACACTTCCTTACGGCC TCTGGCGTCCTCGATACTGCGATGGAGCAGAGAGCGGGAGGAGCAGGGAT GATATCGAGCTTGATATCACGAGCTCTCAGAACACCAAGGTCAAGTTCAT GAGGTGTGTATAGCATGTGTGTAAGCTACTGGAGGTAATGACAGAGTTTG TGCCGTCGTTGGTCCTGAGTATTCGGTATTCAGGCGTCTCTCTTTCGTCA GTCATGATGCGGCAAGATGCTGGTTCTCTCCGCGATACAGAAACATAGCA ACAGCACAGATGTAGCCACGTTCAGCAACCAGCAGCACTTGTTGAACTCT CAGGCCTAGAGGAATCACAGCAGTAGTTTGTGTGAGATATAGTTGTACAG CATACCCACTGAACCACAAGACTTAGTCAGCGCTGACTGGTAGATCCGTG GATACGCTGTACGTAACAGACTGTGCTGATGTACAGCAGACAACAGTACT GCTGCTGTACCACGTGCACACGTGCGCACCCACTGGTACACCAGCCCATA CCCATACGCAGTCCAACAGCAGCGACACACGCCGAACAGCGGTGCTGCTG TTATGCAGCAGCAGCAGCAGCAGGAGCAGCAGAGGCAACAGCATTCTTGC AGGGTGCAAAGTGAAAGTGTTCCAAGACAGTCCTACGTCAGCAGTACGTG CGAAAATCCTGTACCGAAAACACGGGAAACAGCGGAGAAGGAATAACGGT CAGTCTTGAATATATCATGCGGAGGATTAACAAAACCACACATTGAGAAC CGCTGTGGGTGGGTTGTTCGTCGTAGGCTTTTCTGCGAAAGCGGGAGAAA CGCAGAGAGGGCGACGAACCAGTTTATTATCGGTATGGTGTGATACCGCT ACTTACGCGACCGGTATTGTACGTAGTTCGAACAAGGCCTACTTCCCCAA CCAGCCTCGATCCCGTGACATGTTGGCAGCTATCGCTCGTCGTGAAAAGC CTAAACTAGCCATGCCTGTGCTGCTGCCTATACAGTAAGCATGGAGTCAA CCTACCGCAAGGGACGAGAAGGGCTTCTAGACCCCACTTGCCCACGAATA CGAACAACGCAACTTAATCGATACTGCGAGTGGTATACGTCAATCAATCA GACCGTGCGAATGCTCTCTCTCTATTTATCTCTCTTTCTCTCTTTCTCTC CTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCATCCACTCGCATATACATCACACGTGGGGTTCCCAATGGGAG AATCCTTCTCCGCACTTAACCTTCTACTTCAGTACCTGGTACTCTGAAAG CGTGCACTTGAAAACAGAGCACAACCCTATTCCAGCCTTTTTCTCGACCG AGGCTGTGCTGCTGTCCATCTGGAGCACCTGTGCGCCGAGACCGTTCAAC ACGCCTGCACACAGCAGTAGAACGCCTACGTGCTAGACAAATAGAACACA GGGTACCGCGTAGAACTGAAACCATGGAGAGTACAGCCGTGGTTAGGGAG GCCAAGGTTCCGTGTACCTGTAATTGTCTTCTGGCAAAGACACACCGGAG ATTTGGTAGAGGGACGGTCGATGGTTGGACAATACGGCGCTGCTACGTAT GAGCTAGCTACTGTAGGTTAGTTTGTTAAACCAATTGTGCATCAAAGCTG CTGCCGGTTTTTGCGTTGTTGACAAACACCGCCCAAGGAGATACCTTCGC CTGTTATTCTTGATTGTATCCCGTCTTCGTGTGCCTTATGGTCTACCGGC ACGTGTGCGGTGTGTATCAACTCAAGTGTCTAACGCAATAGAATGCCACC CGGTACTCATCGAGCAGGACCTTTCACAAACGGCGGACACGGGAAGACGG AGGGAAAATCTTGGCGGAAGGTCACCGGCTGGTGTGCGATCTCATAGAGG GAGGTCTCACTCCCACCCTCGTCATGGTGTCGCCTGAGGTGAGTTTGCAT TATTTCTACTGCTACTTGCTGCTGCCGCTGCTGCTAATGCTGCTTGTGCG GTGGTCTTCACTCTGAAACCGTTCCTTCCTCTACCCAGTACCTCCCCACT CGGTACTGCTCCAACTGGTGCATGGATCGCGTTCAGCGCGGGTGATTCCA GTGACACAAGCCTCATCGAAGTCCGTGAGCGTCGCTGGGCTCATGACCTG TGGTCATTTGGAGTCACCTCATTAGTTTGATGTGTCTGTATGCCAGGCGG TAGTGGTTGGACTGCCTGTTGACAGTATGAGAAAATGTAGGACACAGCTG GTTCTGCTTTTGTAGCAGAGGAAAGGGTCCGAAACAAACCGTACCAAGCT CCGGTATCAGCGAACAACACTGAATATCAGGAGCGGCTTTAAAATCGCAC ATTACACGGTGTAGCGGAGCTCGATTTCGAAGCAGGTATGACAATCATCG GTGTGAAATGTATCATGCAAAGATACCGGTACACAGAATCCGACATAAGT AATCGACTGTCACACTTCTTCAAGGTTGGCCTGCATGCCGAATAAAATAT GAACAGCCCAGTTCGCCCCCCATTGTGTCGTTTCTGGCTTGGCCAACATA CAAGAAGGGGATACCGGACCGTACACTGACCTCTGAACGATTTTTCAGTT TTCAGCCACCAGCGACAGAAAAACTACAACTACAACTACAACTACAACTA CAACTACAACTACAACAACAACTACAACTACAACTTACAACTACAACTAC AACTACAACCACAACTACAACTACAACCACAACCACAACTACAACTACAA CTACAACTACAACTACAACTACAACTACAACTACAACTACAACTACAACT ACAACCACAACCACAACTACAACTACAACTACAACTACAACTACAACTAC AACCACAACGACAACTACAATGGTGCTGACCCATGTTGAATCCTTTGCCT CTCGTGACAATCTTCGGGCGTTGTTGTTCGGTCGTCGCCCGTGGATACAA ACAGGCGCTTTGTGCATCCCCTGGGCCCCGATTGCAGGCCGCCCTGGAAA CCCTGCCAGCAGACGTTGTTTCCGTCGCTCCGGCAGAGGTTGTCCAGCGC TGTTGCGACACGGTAACCTCGCAAGGAGTGGTGGCGCTGGTGGATCGGCC GGTGCTTCCGTTACCCGACACCCTGCAGACGGTGTTGATATGTGACGGTA TACAAGATCCAGGTGTGTAGAGGAAGCCAGGATGATCTGTAGCGATGTAT AGTAGCTGTAGAACATCTTCCATGTACAGTAGCCGCATACTCGCAGCCGT ACCTTGGTGCAAGAACACATCTTACCAGTTTATCATATCAACATATGCTG AATTGATTTCGTCCCCACAAACATGGGTGCAACAAGTCGGTGACAGGGAC TACGTATGTAACTACGGTGGCAGCCTACCGACTTTTACGCTTGGCCGATA GTGATGGATGGTCTCAGCGTCTGCCGAATTTTAGAATTTCTGGAATTTTG TCAACAACACCACCCGTGCTGCTTAGAACGAGGGTCCGAAACCTACCTTC CTCCCTCGCCCCGTTTCTGACTTGGGCTTGCAAGCACCCGGCCCAGCTGA CTTGGGCATGCAATCGGTTCCGCGATCGGAGAACCCACACACAAGATGGC GTGCTTTTTCGTCCTCTTGCGAACGAAGCACGGTATCGAATGATGCATTC CTTGCCCGCCGACCGACATTCACAACGTGCATACAGCAGTAGCTTCGCGT CTTTAAGGCTTCCCCGAATGGAAAACCGCTGCGACCATAGGTACAACCCT GGTGCCCCCCCCCCCCCCCCCCCGATTCCTTCGTTCCGTGAACGCTGCTT GATAACTTGATGAAAGGGAACCTCGGGACTCTGGTTCGGACTGCGGCGGG GTTGGGTGCTGACGCAGTGGTGAGTTGTTTTTCCATTGTAGCAGTTTGCG CCAAAACGGACAGGGTTTTCTCGGGGGCACCGCAGAGTGTAAACGAGCGT TGTTTGCGCCCCCGCGTCGGCGGGTGTTTTGACACGGTTCTACATATCTG TTTGATTGTTTTACCGGGACGATGCAAAGGTGTTCTCGAGATGTTCGCGT TCCGCTGCAGAAGACTTTGTGTATCGCACTCCGTGTGACAGTTTTGGGCG CCGTAAAAACGATTACCCGATGCGGTAAGTAGCCGTGATGTACGCCGCCG TGGTAATATTCAACAGCAGGTGGACAGGAACGGGTGTATACATTGTGCGC GTATGTTTCGAGCTGGTGTTTTTTCTGTGTGATCGTTTTTCGGGAAGGCC TACGATTCATTTACGCGAGTATCGCAGTACATCATATCGCTCGACGAACG CAAAGAAGCTTTGGCTTTTTTTGAAACTCAGTTAAAAATAGATGCAGATA AACCAAAATCGGCTTGTATTTTCTCTTGATGAAGCAGACAGCCAATTAAA TATAAGTAAAATTCGAATTAACTTGGGGCATAAGGGGTTGTCTGTGATCT CTCCGCTGCTGCTGCTGCTGCTGGATCTACTACTGCTGTTGCTGTTGTTG CTGCTGTTGCTGCCGCCACTCGTGCCAACATGAACAAACGCCCAGGTACT CACGGGGACGTGCGTGGACTACTGGGCGCCGAAAACGGTGCGAGCTTCGA TGGGGGCTTCGTTCCGACTCCCGTCGCTGAGACTGGAATCGTGGGACGAA GTTGTCGGTGAGTCGTCCTCGATGCGGTGTGAGGTCGGGAGAGGAGGGGT GGCGGGAGGGCAAGGCGGCACGACAACATCGGGGAAAAACTGTTAACAAG GGCCCCGGGTGTTTGGCGGGCGGGGGCCGATGTGGTTTCTCGACAACTGC GAAGGCTGTTTGGGTGTGGATTGGCGGTGGTTCACCGGCCGTGTGAAGGC AGCTTTTGTCGGGGGGTGTAGCCTTGCCGCGGGCTTGATGCCTGCGCGTG TGGTCGACCTCACGGACAGGCACAGAACCGTCTGCTCGCCTGCCGCGAAC AGCTCGTTTCGTAGCTCCGGTTTTAGCGCGAGCACCCATCCCCCTGGCTC CGTACCCCGGCACATACTCATCCCCAGCTCGTTGTTTCGCACGAGTGCGA CATACCCGACGGGTTCACGCTCACTTCTCTACTCCATCTCCCTCACACAC ACACCACACACCACACACCACACACCAGCAATCGCTCCCAATGTGCGCCC GTATCGCCCCCAGTCCTAACCCTCTCTCTTCCCCTTAATCCTCGCCCTCC CTCCTAATACAAGAGCTCATGCGAGCGCGCGGCGTGAGCATCTACGCTGC CGAGGGGGGCTCGAGGCTGTCGCACTTCGATGCCGACTGGACCTCTCCGA GTGCACTCGTCGTCGGCGCCGAGGCCAGAGGTAGGCGGCGTGCAGGGAGG GGGGGAGGAGGGGGGGGGCAGGGGGCGTACCCATTTGTTGCTTGCCTTTG GTATGTGACCCTTGACCACGCATCCCCACAAAATTCATAACGGAGGGAGC ATGATTGGGTTGTCATTAACAAGGAAGATAAGGGTGGGAGGCGGGGGGGG AAATCTTCGGCCCAATTTTTGTCATGGGTCGGTATCATACCCCCTCCCTC CGACTGAAAAAAGCATTTAATGAAGTACCTAGCAGCACGAACCCCCGGGA AATGCTTGTTTCTGATTTTTTGTTGTTTTTTCATTTCGTGCGATGATGCG CCTGTTGTACTGTACTGTATTTTCATGTGAATTTGTTGTTGGGTGTCCGC CACGCGGTACGTTTTTGGCGGGCGCACTGCGCTGTTTTGTTTCCATCTCC GACTTGTACTTTCTCGGAGACGCATGCAACAAAAAAAACAAAATCGGTGT CGCGGGAATCTGTAAGTCGAGAATGTACCTAAGGCCCCCCTAATGTGCCT TACCGCGGCACGACTCAGGCCTGGGCGACGCCGCGAGGCTGGGGTTGGAG AGCGGGGACATCGTCGGGGTCAGCGTCCCTCTGGCGGGACACACGGAGAG CTTGAATGCGGCGGTGGCGGGCGCAATCGTGCTGGGGGAGGCGCAAAGAC AACGCCTCGTAGCGGAGAGACTTGGTGGAGCTGGGGGAGAGGGCAGGGGC GGTGCGGCGGGGGAATCGGGCAGGCGGGGTGTCGCACAGTAGTAGTCGTG ACTGGCATGGCAGGGGCGTTTCATTCGGACGGAGTGAAGGGGTCCCGACA ATGAAAACGGCACTATCGTAGCTGTATACCAGGTCGGTGATCCGGGGAGA GTGAGTGTGTGTGTGCGTGTGTGTGCGCTTTGTGGGGCTCGCACCCGACT TGCTCCTAGCCGGGTACCCGACCTCGATTACCCGGAACCGAGTAGCGTCA CCGGGTACCCGGTTCCAATTTTACGAGTCGGGTGCGACCCTTAGTGTCGC ACCCGACTTGCTCCTAGCCGGGTACCCGACCTCGGGTACCCGGAAACGAG TAGCCCCACCGGGTACCCGGTTCCACTTTTATGAGTCGGGTGCCACCATT AGCCATTTGTCATGCACGGCCATAGTTCACCACTGGAAGGGTTAGGTTAG GGTGTACGCGCGCAGGTGCCTTTGTGTATGTTACTCATCATGAACGGCCG TGACTGTTTCTAGATTGTTGCACTCTTTTTATTTTTGCATGGCCGATATG GAGCGCGTCAGGGCTGTCGACCGTTCGGGAGATTTCAAGTTTTGGGTTGC ATCGGGGAGTTCTGGCTTGCTGTTCGGTTATTGGCACCACAGCTTGTGGA GTAGAGCGTGGTTGGACCAATGTTGACGTGTTTTTAACGGCGGCGTTGGC TGGTTGGCTACCGTTAAACCCTTTGTCAATTTGTCAACCCCCCGTATACC ACCCCCCCCCCCCATCACCTTTTCAGCCTTGAACCATGAAGCCTTTGATT TAGCCCCGGGGGGAACGTTTTTAACAAAAAAAAAAAAATCCCCCGCCCGA GACACAATTTGCCCCCGGGGTAATTTTTTCCGATTCGTTCCCCCCGGGTA TTTTTTTTTTAATATACTTGTTGCGATTTTGGCATCACTGCGAATGAAAA GCGCCGGCTCTTTTGAGGCCGGCAAGCTGTTTTATTGCTATTCTTAGGGA GTCGTCACTAAGGCCGAGCCGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig140:190434..197706-

>mRNA_P-littoralis_Contig140.36.1 ID=mRNA_P-littoralis_Contig140.36.1|Name=mRNA_P-littoralis_Contig140.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1083bp|location=Sequence derived from alignment at P-littoralis_Contig140:190434..197706- (Pylaiella littoralis U1_48)
ATGAGCGTTGCTTTCAACAGTGGACCGGCAGGCGCGCCGCTGGCAAGAAT
AATCGCGACATTTTTCGCGGCCCGCGCCGCGCGACCAGCTGTCAACAGCA
GTGTCGTTTCGAGAGCAACGTCAACATCAACACTTCCTTACGGCCTCTGG
CGTCCTCGATACTGCGATGGAGCAGAGAGCGGGAGGAGCAGGGATGATAT
CGAGCTTGATATCACGAGCTCTCAGAACACCAAGGTCAAGTTCATGAGGA
CCTTTCACAAACGGCGGACACGGGAAGACGGAGGGAAAATCTTGGCGGAA
GGTCACCGGCTGGTGTGCGATCTCATAGAGGGAGGTCTCACTCCCACCCT
CGTCATGGTGTCGCCTGAGGCGCTTTGTGCATCCCCTGGGCCCCGATTGC
AGGCCGCCCTGGAAACCCTGCCAGCAGACGTTGTTTCCGTCGCTCCGGCA
GAGGTTGTCCAGCGCTGTTGCGACACGGTAACCTCGCAAGGAGTGGTGGC
GCTGGTGGATCGGCCGGTGCTTCCGTTACCCGACACCCTGCAGACGGTGT
TGATATGTGACGGTATACAAGATCCAGGGAACCTCGGGACTCTGGTTCGG
ACTGCGGCGGGGTTGGGTGCTGACGCAGTGGTACTCACGGGGACGTGCGT
GGACTACTGGGCGCCGAAAACGGTGCGAGCTTCGATGGGGGCTTCGTTCC
GACTCCCGTCGCTGAGACTGGAATCGTGGGACGAAGTTGTCGAGCTCATG
CGAGCGCGCGGCGTGAGCATCTACGCTGCCGAGGGGGGCTCGAGGCTGTC
GCACTTCGATGCCGACTGGACCTCTCCGAGTGCACTCGTCGTCGGCGCCG
AGGCCAGAGGCCTGGGCGACGCCGCGAGGCTGGGGTTGGAGAGCGGGGAC
ATCGTCGGGGTCAGCGTCCCTCTGGCGGGACACACGGAGAGCTTGAATGC
GGCGGTGGCGGGCGCAATCGTGCTGGGGGAGGCGCAAAGACAACGCCTCG
TAGCGGAGAGACTTGGTGGAGCTGGGGGAGAGGGCAGGGGCGGTGCGGCG
GGGGAATCGGGCAGGCGGGGTGTCGCACAGTAG
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