mRNA_P-littoralis_Contig140.28.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig140.28.1 vs. uniprot
Match: D8LEQ1_ECTSI (Ciliary dynein heavy chain, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ1_ECTSI) HSP 1 Score: 2715 bits (7038), Expect = 0.000e+0 Identity = 1695/3049 (55.59%), Postives = 1962/3049 (64.35%), Query Frame = 1
Query: 2206 MNKGWNQMPSV-----GHEQNASSPNAGSPNNGGASPVAVVASMSSLEEELLSSVKCAPTNATTGVVDDEEYGVNA--PPKSWSFAARQRLECARIFRIFRYARLRMRQTLRGLALDHAELLLGAVTRTVVEV----AGGGGKEDKFPAGGPARG-KIQQQRPQARDGAGCNEGESDHREPSGDLEPQLGHPRHFDLGGLEEENNKVSNKDKQRVRRRS----------NPRHEARHCDAWNTRLATDVDEKDMGDLSTLALDTSGLEEIPRGGLGARVAERERLVVEWRKAFRKKVVLTGGRRSPLTPIPRFWTVPVSSFNSRISLPTNCLSVPLAIQLACELVPHAEETLALKNPSGAKPILVEMFEAEIPPDLRGDNFFPITHRFHREQHGVTEDVFMSAALKLSAACLGGIDAQLSEVSSDRSWEEEDDDEGVAIVVSAGDKGLQRETARPPDISNDGDEHPSLLDASLWDENIGVGLSLRNGKEATETLCGGGVRQEGKSKRKAWARLEQSSEVCGIDAGPCGGISLEVDIRGNFEEWDLQVFPPLQDFIDRAKRAQLQVLAALARIPCLLDHHEVKPYRTMMEGHGLGYELPQGGAFDESTATCLPPELENGFSSWERARGAKKTEARDDADNPREDSLQECDWLENLSEDPYFCGLQDKVFLSLASSHNGVYRMVDGFRPLLEEFQALETFSAEREARDLRLQNMADPDVMAAKLVASIERTGGGVGTLDLTPVLLAKSTTNWLSDWYSRFERYRQTVRASSTDCPQALLSVNAMNFISYLVALPEASLEEIRMIGPRLMLNAATTLGAVFRRCNAVLSGGLNGVDAMGEKARFLGQIEQWLHQLRDEVKRFEELGLLLKHIGCFEPRPTALPGATVKTGSVAAPTGANCSSGPLPPATAGVASSSTSATISSPKTAGAGQGGKGNDTKPACSDTISCAHQEESASYKRGQNEVT-GVFPEDCRRGGGGDNRGQYDFRAVENQTREALKSLGFHLTVLQRSVDQAHINMRIASQEFHSLLKKALESLGRDIERLETDLLDPALSSAATDPEKACSRLEGYRHRLESLQEEQSRYRDYNKLLDADLVKRVAKGGSKQQFDEEKMRLDLGRVGAERRQLVLKWQAQREVFGIRKEWDNSTLISCDAGVMAARLSRAVRAHAFAVTAGGGGNEVTASSEETLAHLGRVVEAVGFLQNRNLTTAYWERVERIMPLREDLKAAARNFHMSDLRRAANLDVSISTTAPSAGTMPPPAADKVHNRRGSCLKETSQPSPSKEHRDSFAAKQSATDSADSVTPKSTAVDKDQPSLGAASAFSSLATGILRPKTD-GKKARVRKAAAAVSSGAGRERRDEARRHAELYEVFPMAAEWGGLSLAVLFKHGLLERRREIGSISAEATASAVLRKTLEELEGVWETAPMMFCWRFDEGTPAPGKTKQPPIVNEVSLRRRQQYSRVLAEPPAVSRGYSAATTAVGGLGGXXXXEGGDNTPPASEGFTSLMSNGDELLRLAEHCRVVVDSVVDAPPALLAVGNIGKAALEWQKRIYWFQELVTQWMAVQEQWVRLAPAFVAEDPEDGVPLHEMFRFTDVSVSFQVILATLRADSCMSVLAGKHQGVEKGGRSLLAKIRKLQEDLEVVSITMDRRVAWLCGSYTAVCPRLLALPRHRLFRLFRGWVAGRVGSGASAGEMNERAACMFRGVGEIVWKEIVSTTGGMTVRTHMAAAGVRSSGAGLEVVQFLSPVPAVGRFEIWIRDIDRQLISAIAQDVETAAVALFQHCKPG----VGLGGSALLRHAGIAERVG-DNHEVSGGGVASPIRPGVPTPLSQSAEHEGQALAAAGEKLNDRRQPSVQGQLLARSAHWTTAVEAALSGTSIGTSLSPGVGSGGRGGE-VSGATKKPE-HMLREILSTILLNVDGWVGELCQPGGIIAYSSLTNTALTTQALQHRDVVEELLKTV-----SASXXXXXXXXDDG-------LSSATAGSATMS-------SFLEGREEESSGVGAD-GISPFLWMCHLRHYYTSPEEARFHNGGAQQESNGQLGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIRVGLGPWNVPYGFEYAGTLERLWLTPLSERCLLHAVHSAKGRYGGLLVSASGTHRRQADPTRCSPAPSPPSPADISTVAQDVAIAFGRPFRLLHSGCVTSPQAVSSVIASTLMAGGVTVFAGVDELPKVSLAVLAESLRAVMLCLHAGQENVLINGEEVSLSTRPHLLPNFDPALHQWKLLSWDNRMTASTSYGSRQNNCGGGGGL---FLGVFATLAKQGPSPKLPLSVRSAFRPVLTALPNTPLLLEAMLLTSGFVGARTLVQGLVQGLRELRASPRIL----------PHESATRGAAVITAAAAVPSVDSISRGS-AANSFEVRSSTDVATLLHAVAVKAVRTATGLLAAETARELRAARRKLGLDSLTSSERNEKTEHISRAVEARALIAGFVRALLLEEAGGDIRALKSQKTKKPTVSSSSGSKKLCDVPVPTGTATTAKET--STPTDAEQLEIDKRRAAMVMAFQQTEIFRGILQPLDDMAATGRKLAPQGNVKLRATELAASGTASRSRDMNVLKTLLKRALRVTGISPTRDQIDAATELWQALWSCSRPAVIVTGAAGVGKSSILQAMPRMAEDVGRTNRQLNRLLSKQAPTTGNKQDKAAGGNVKVKGRSKPDPTTQHPGASPLDPPGAIFAPPANTRGAAAYRQIVNRQLPFLAYITATAGFRKGTARSS--GSVASDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSQRSAATKSSAKSG-----SAGIRTVQTLSRRSGCAGVPRAALEGSAFVIPAQEIEVVYTGGCSAEHLLGSTDDKGSWLDGLLVRRLRVLVEGVRGGVHAGAALSRHRARGVGTGDVCPPTVG-VSSGFSHGCKSRLLVLDGPVSRLLEGIIAGDYASAPSLTGLEECGHDARCLLLPDGETLALDAWGHVAVETGDVRHLSPSTVTGVAIVHLRADGPALIGGMRD 11127
MN+ WNQMPSV G N S N G P+ AS VAV A SLE+ LLS+V A + G +D +A PP SWSFAARQR+ RQ LRGLALDH E LLG V R +V V G D G A G + Q+++P A G + GE H+E + Q P+ + E+ N RHEAR D+WN R A VDE DM DLSTLAL+ LEE G A E LVV+WRKAFR+ V TGG+R L P RF +F SRIS+ NCLSVP AIQLACEL+PHA ETLA+KNP GAKP+L+E FEAEI P+LRG+ FFPITHRF EQ GVTEDVF+SAALKLSAACLGGIDAQLSEVSSD S EE+ + E + + A D+ QRE ARP + + D +P++LDAS+WD N T++L G V S+ + R E SE+ GI PCGGISL+VD+RGNFEEWDLQVFPPL+DF+ RAK+AQ+QVL ALAR+PC+L+H +VKPY+TM+EG+GLG+ELPQGG DE A+ E EN +SW+ G E + E + EC WLENLSEDPY+ GLQDKVFLSLASSHN VYRMVDGFRPLL+EFQAL TF+AERE RLQ+ +DPD +AA ++AS +RTG G LDL+PVLLAK TT WL WYSRFER+RQTVRA+ D PQALLS+NA + I+YLVA+ FL QIEQWL QLRDEV++ +ELG+LLK IGCF+ P LP VKTGS + SS PL P T S T SP G G G D P +D Q + G+N V+ G + C G D+RG YDFRAVENQTREA +++G+HL VLQRSVDQAHINMRIASQEF SLL+KALESL RDI+RLE D+LDPALS+A+TDP KACSRLEGYR RL LQE++SRY Y+ LD D+V+ +AKGG K QFDEE MRLDL RVGAERRQLVLKW+AQR+ IR+EW++S LI CDA VMA++LSR VRAHAFAV G +EV+AS E TLAHLGRVVEAVGFL NR+L+ AYWERVE+ MPL EDLK AAR M LR AA L+ P AD +++ G + PS K + + K DS D + +ST S G A FSS+AT ++ PK D G K RV KAAA VSS AGRERR +ARR AE+YEVFPMAAEWGGLSLA L H LLE+ + IGSISAEATASAVLR TLEELEGVWE APM+F WRF+EG PAPG TKQ P V+ SLRRR+ YSRVLAEP V +GYSA T A GG XXXX D PASEGFTSL+SNGDELLRLAEHCR+VVDSVVDAP ALLAVGNIG+AALEWQKRI WFQE++T WMAVQEQWVRLAPAFV E +DGVP H+ RFTDVS SFQ IL TLRAD+CM+VLAGK QG E+GGRSLLAK+RKLQ+DLE VSITMDR LFR W AGRVGSGA+AGE NERAACMFRG+GEI+WKE+VST G TVRTHMAA GVR GAGLE V F SP+PAVGR EIW+RD DRQL+SAIA+DVE AA +L Q+ G +GL S L G+ + G + A+ R G P + + +G GE+ RQPSVQGQLLAR AHWT +E+ L+ T S G+GG G VS AT KPE + L+++L ++LL+++ W GE QP G+ AY+SLT TALTTQALQ RDVVEELL+TV S S G +SA +G A S S + G + G+ + PFLW CHLRHYYTSPEE + NG AQQ S+ L ++ XXXXXLIRV +GPWNVPYGFEYAGTLERLWLTPLSERCLLHAVH AK AVSSVIASTLMAGGVTVFAGVDELPKVSLAVLAESLRAVMLC+HAGQE VL+NGEEV LST PHLLPNFDP LHQW+LL W + A G+ +N FLG FATLA+ GP P+LPLSVR+AFRPVLT LPN PL+LEAMLL+ GFVGAR LV GLV GLREL+ P P T + TA AA S + S +A V D ATLLH VAVKAVRTA LLA ETARELRAARRKLGL SLTSSER EKT+H+SRAVEAR LIAGFVRALL EE GGD RALKSQKTKKP +S+S + + + +TP DA QLEID RRA MV FQ+T++ + IL+PL+DMAATGRKLA Q N+KLRATELA SGTA RSRD+ LKTL KRAL + G+SPT+DQIDAA ELWQALWSCSRPAVI+TGAAG+GKSSILQAMP+MAE V NR+LN+ L KQ P KQD A G TTQHP AS LDPPGA+F PPAN+RGAA YR+IVNRQ+PFLAY+ AT+ RKG +S G+VAS S FSQRSAA +G+ V + G G+P A +EGSAFV+PAQEIEV+YTGGCSAEHL+GSTDDKG WLDGLLVRRLR LVEGVRGG A SRHRA GVGTGDVC P G +SGFSHGC+SRLLVLDGP+SR+LEGI+A D+A P LTG EEC H +RCLLLPDGE LALDAWGHVAVETGDVRHLSPST+TG AIVHLRADGPAL+ GMR+
Sbjct: 1 MNRAWNQMPSVHRPPDGGSPNKESSNTGLPSEDQASSVAVAARRPSLEQVLLSTVNQATSRKAGGDIDXXXXXRSATEPPTSWSFAARQRI----------------RQELRGLALDHGERLLGVVARRLVAVPEERGTGATNADGIVRGRAAAGERTQREQPSAGHGGLDSRGEEGHQEQAERPPRQRRQPKQPGVCDQEQGGXXXXXXXXXXXXXXXXXXXXXXXXRNLRHEARPYDSWNMRWALAVDEGDMADLSTLALEACLLEEATGDGSEAGAEEGADLVVKWRKAFREAVTSTGGKRDSLAP-SRF------NFCSRISVQDNCLSVPRAIQLACELIPHATETLAIKNPLGAKPVLIETFEAEITPNLRGEEFFPITHRFSGEQKGVTEDVFLSAALKLSAACLGGIDAQLSEVSSDFSEEEDGEVEALMVSRLAADEEKQREHARPINENKD-HRNPTVLDASMWDANSN-----------TDSLSGVEVAAH-PSRTRTSMRPEHLSEIYGISTAPCGGISLKVDVRGNFEEWDLQVFPPLEDFVRRAKQAQVQVLTALARVPCILEHPDVKPYQTMVEGYGLGFELPQGG--DEEIAS----ERENTSTSWQETGGRGIAETTHRMEQVAEGPMDECGWLENLSEDPYYRGLQDKVFLSLASSHNSVYRMVDGFRPLLQEFQALGTFTAEREREYERLQSTSDPDAIAADVIASAKRTGNKAGCLDLSPVLLAKPTTEWLHSWYSRFERFRQTVRATKIDSPQALLSINATDLITYLVAV-------------------------------------------------FLCQIEQWLWQLRDEVQKLQELGILLKKIGCFDAWP--LPRLAVKTGSGVVSANGDGSSMPLSPPTT---SKPAEITAFSPTKTSRGDG-NGKDETPT-NDVARSEQQTDPPPDDGGKNNVSRGTAGKSC---GFFDDRGGYDFRAVENQTREATENVGYHLVVLQRSVDQAHINMRIASQEFSSLLRKALESLSRDIDRLEADILDPALSNASTDPTKACSRLEGYRQRLADLQEDESRYHHYSGFLDKDVVRALAKGGGKNQFDEENMRLDLERVGAERRQLVLKWEAQRKAVHIRQEWESSALIFCDADVMASQLSRVVRAHAFAVETAGCADEVSASCEATLAHLGRVVEAVGFLHNRDLSAAYWERVEQAMPLNEDLKRAARKEFMPALRHAAGLEKG-------------PPAD-INDNNGESFNQAEPPSAEKGEKTAI-EKTGVADSVDPLATESTDSVTGPSSSGTAKVFSSVATRVIPPKFDAGGKLRVSKAAAVVSSVAGRERRGDARRRAEVYEVFPMAAEWGGLSLATLLNHELLEKIKVIGSISAEATASAVLRNTLEELEGVWEAAPMIFLWRFNEGAPAPGITKQSPTVDSDSLRRRRLYSRVLAEPALVQQGYSAGTIA-GGXXXXXXXXASDL--PASEGFTSLLSNGDELLRLAEHCRLVVDSVVDAPSALLAVGNIGQAALEWQKRISWFQEILTNWMAVQEQWVRLAPAFVPEHLDDGVPAHDRVRFTDVSGSFQNILGTLRADTCMTVLAGKQQGAERGGRSLLAKVRKLQDDLEGVSITMDR--------------------------LFRDWAAGRVGSGAAAGETNERAACMFRGIGEILWKEVVSTNG-TTVRTHMAATGVRCCGAGLEAVPFSSPIPAVGRLEIWVRDFDRQLMSAIAEDVEIAANSLRQYQAGGGFGHLGLRTSGLNAIPGLLPKSGIPSSSNKPANTATSERSGG-DPYAVGGDGDG---GKNGEQTTTGRQPSVQGQLLARGAHWTAQIESVLACTISEPLHSTDGGNGGGGAAGVSAATNKPERNKLQDVLESLLLSLNAWSGEFSQPDGLTAYNSLTITALTTQALQQRDVVEELLQTVLMPPPSPSPTPPSENGGQGRQAGETLATSAASGMAPSSPTARSAPSSINGHRDREHGIDEEENYFPFLWACHLRHYYTSPEEVQPLNGRAQQRSD--LQTDNDDRSDHGAAGSGGTKNEGRGGYEDQENDSVPXXXXXLIRVSVGPWNVPYGFEYAGTLERLWLTPLSERCLLHAVHCAK--------------------------------------------------------------AVSSVIASTLMAGGVTVFAGVDELPKVSLAVLAESLRAVMLCMHAGQEKVLVNGEEVPLSTTPHLLPNFDPILHQWRLLPWGRQRAAGA--GNCYHNXXXXXXXXXPFLGFFATLARTGPDPQLPLSVRAAFRPVLTVLPNIPLILEAMLLSRGFVGARALVLGLVGGLRELQNIPAPCHTRSDGNAGTPGSMHTGKLSFETATAAEKSSNKSSNNRCSAGGDSVTRPADPATLLHTVAVKAVRTAAELLAPETARELRAARRKLGLASLTSSERKEKTKHLSRAVEARVLIAGFVRALLFEETGGDPRALKSQKTKKPALSTSGNTNSXXXXXXXSAPKIVPVDNLAATPKDAGQLEIDARRAVMVSTFQKTQVLQEILKPLEDMAATGRKLAQQ-NLKLRATELAESGTAIRSRDVAQLKTLAKRALIMNGMSPTKDQIDAAAELWQALWSCSRPAVIMTGAAGIGKSSILQAMPKMAEHVDLINRKLNKSLKKQVPKAKKKQDGAEAGGA----------TTQHPNASVLDPPGAVFEPPANSRGAAPYRRIVNRQVPFLAYVNATSTGRKGGNKSDDGGTVASGASGSSKGTKATTISETSNVSGASSDGGASVFSQRSAAXXXXXXXXXXXXXGSGVARVG----KCGSGGIPPATIEGSAFVVPAQEIEVLYTGGCSAEHLIGSTDDKGCWLDGLLVRRLRALVEGVRGGACTTAKRSRHRACGVGTGDVCLPPAGKATSGFSHGCRSRLLVLDGPISRVLEGILASDHAGGPPLTGPEECRHSSRCLLLPDGEALALDAWGHVAVETGDVRHLSPSTITGAAIVHLRADGPALVKGMRE 2818
BLAST of mRNA_P-littoralis_Contig140.28.1 vs. uniprot
Match: A0A6H5KFY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY1_9PHAE) HSP 1 Score: 1638 bits (4242), Expect = 0.000e+0 Identity = 1112/2259 (49.23%), Postives = 1327/2259 (58.74%), Query Frame = 1
Query: 283 PRRPSTTSGRPYRAGRHHRGQMAHASGRQLVQPWSAPPEVVDSGREAGSDDGACEE----------------RELQESRQHPQQNYPLRPVGEKERARQPYTNASQRTIRNTATSTPSDEGNLEVGNDGGHDEKTPWVEARLGPDVSTPRPIAE-----AESSALLGHLHSTRQRTVE---GDEDAWSQSMEGEEEEGAERSASVVLSSNVLLSPRGRARTPTLLVGDDSHFSPKATDCRVASPDGGDDWVYDLRPRSHIAE-----GISGTSRPTRCHAPAASSPNAPQNQLRMSSDAVIRQHVLTKEHAELVESLWTQGSVLG-----HVEKNNPARVVFGTDEFAGDREIACFLATAAAMAEIEAXXXXXXXXXXXXXXELSVSGTAEAHTLERWSLLPPEAGSILVAVPLHAGDLSRRYNPYHLRIVDRVVEGGGRQGRREGTKEMFDGDHEISGNWNGEELPEKASLSETRVTFALDSGGGECGCYKKEPEQAPGYEKKCFGVEEERRE--C-DVERAYFSLQGVTLVNVHGETSFQPLEEWRLEKERFDHIYGMSFVRGYPGWKYLRGIAMFVRSKRANELKHNIERGLAWLDPVCRSAVQEIVVQLHRMQPLRLMTAKKGATATYTLDEFFGEQTRNMVKYERELMDVYDR-CGQILGRTAKKHLDAEGLLVMNKGWNQMPSVGHEQNASSPN-----AGSPNNGGASPVAVVASMSSLEEELLSSVKCAPTNATTGVVD--DEEYGVNAPPKSWSFAARQRLECARIFRIFRYARLRMRQTLRGLALDHAELLLGAVTRTVVEV----AGGGGKEDKFPAGGPARGKIQQQRPQARDGAGCNEGESDHREPSGDLEPQLGHPRHFDLGGL--EEENNKVSN-------KDKQR---VRRRSNPRHEARHCDAWNTRLATDVDEKDMGDLSTLALDTSGLEEIPRGGLGARVAERERLVVEWRKAFRKKVVLTGGRRSPLTPIPRFWTVPVSSFNSRISLPTNCLSVPLAIQLACELVPHAEETLALKNPSGAKPILVEMFEAEIPPDLRGDNFFPITHRFHREQHGVTEDVFMSAALKLSAACLGGIDAQLSEVSSDRSWEEEDDDEGVAIVVSAGDKGLQRETARPPDISNDGDEHPSLLDASLWDENIGVGLSLRNGKEATETLCGGGVRQEGKSKRKAWARLEQSSEVCGIDAGPCGGISLEVDIRGNFEEWDLQVFPPLQDFIDRAKRAQLQVLAALARIPCLLDHHEVKPYRTMMEGHGLGYELPQGGAFDESTATCLPPELENGFSSWERARGAKKTEARDDADNPREDSLQECDWLENLSEDPYFCGLQDKV---FLSLASSHNGVYRMVDGFRPLLEEFQALETFSAEREARDLRLQNMADPDVMAAKLVASIERTGGGVGTLDLTPVLLAKSTTNWLSDWYSRFERYRQTVRASSTDCPQALLSVNAMNFISYLVALPEASLEEIRMIGPRLMLNAATTLGAVFRRCNAVLSGGLNGVDAMGEKARFLGQIEQWLHQLRDEVKRFEELGLLLKHIGCFEPRPTALPGATVKTGSVAAPTGANCSSGPLPPATAGVASSSTSATISSPKTAGAGQGGKGNDTKPACSDTISCAHQEESASYKRGQN-EVTGVFPEDCRRGGGGDNRGQYDFRAVENQTREALKSLGFHLTVLQRSVDQAHINMRIASQEFHSLLKK-------ALESLGRDIERLETDLLDPALSSAATDPEKACSRLEGYRHRLESLQEEQSRYRDYNKLLDADLVKRVAKGGSKQQFDEEKMRLDLGRVGAERRQLVLKWQAQREVFGIRKEWDNSTLISCDAGVMAARLSRAVRAHAFAVTAGGGGNEVTASSEETLAHLGRVVEAVGFLQNRNLTTAYWERVERIMPLREDLKAAARNFHMSDLRRAANLDVSISTTAPSAGTMPPPAADKVHNRRGSCLKETSQPSPSKEHRDSFAAKQ-------SATDSADSVTPKSTAVDKDQPSLGAASAFSSLATGILRPKTD-GKKARVRKAAAAVSSGAGRERRDEARRHAELYEVFPMAAEWGGLSLAVLFKHGLLERRREIGSISAEATASAVLRKTL-----------EELEGVWETAPMMFCWRFDEGTPAPGKTKQPPIVNEVSLRRRQQYSRVLAEPPAVSRGYSAATTAVGGLGGXXXXEGGDNTPPASEGFTSLMSNGDELLRLAEHCRVVVDSVVDAPPALLAVGNIGKAALEWQKRIYWFQ 6786
PRRP+T S + ++AG+ + + SG + ++ SAPP S R+A + + + E QE Q P Q YPLRP EKER Y + QRT+R TSTP+ +GN E + + E RL D T + + AES + ST Q + D D S G +R A+VVLSS V+LSPRGRAR PT + F A + R S D DW + L PR H A+ G S PT A S NA Q SSDA QH +K+ AEL+E LW QGSV + +N AR +FG DEFAGDREIACFLA+AAA XXXXXXXX + T AH+ +R LL P+A LVAVP+HA D SRRYNPYHLRIV R V+GG GRR+ K M D D E SGN + E+ SL E + S + G +++ + G VEE++ + C D+ERAY GVT VNVHGET+FQ L +W EKERFD + M FVR YP WKY+R I FV KR N+LK +ERGL LD V SA+QEIVVQL R+Q L +TAKKGATA YTLDEFF EQ RN VK ERE+MDVYDR I+G MPSV ++ SPN G ++ AS VA+ A SLE+ LLS+V A T G +D D+E PP SWSFAARQR ECARI R+FR+AR R+RQ LRGLALDH E LLGAV R +V V G D G A G+ + QR Q R AG + +S RE G+ +E+ + + D R VRRR N RHEAR CD+WN R A VDE DM DLSTLAL+ S LE+ G A E LVV+WRKAFR+ V TGG+R L P RF EQ GVTEDVF+SAALKLSAACLGGIDAQLSEVSSD S EE + EG+ + A D+ Q E ARP N +P++LDAS+WD + T++L G GV + R E SE+ GI GPCGGISL+VDIRGNFEEWDLQVFPPL+DF+ RAK+AQ+QVL LAR+PC+L+H +VKPY+TM+EG+GLG+ELPQGG DE A+ E EN +SWE G E + + E + ECDWL+NLSEDPY+ GLQDKV FLSLASSHN VYRMV+GFRPLL+EFQ +DPD +AA ++AS +RTG G+LDL+PVLLAK TT WL WYSRFER+RQTVRA+ D PQALLS+NA + I+YLVALPE LE++R+IGPRLMLNA LGAVFRRCNA+LSGGL GVDA+GEKA FL QI QWL QLRDEV++ +ELG+LLK IGCF+ P+ P KTGS P + SS P P A T SP G G G D P + Q G+N + G + C G D+RG YDFRAVENQTREA +++GFHL VLQRSVDQAHINMRIASQEF SLL+K ALESL RDI+RLE D+LDPALS+A+TDP KACSRLEGYR RL LQE+QSRY Y+ LD D+V+ +AKGG+K QF+EE MRL L RVGAERRQLVLKW+AQR IR+EW++S LI CDA VMA++LSRAVRAHAFAV G +EV+AS E TLAHLGRVVEAVGFL NR+LT AYWERVE+ MPLREDLK AAR M LR AA L+ P AD +++ G + PS +F + +ATD DSVT S S G A FSS+AT ++ PK D G K RV KAAA VSS AGRERR +ARR AE+YEVFPMAAEWGGLSLA L HGLLE+ + + + R T+ +ELE VWE APM+F WRF+EG PAPG TKQ P V+ SLRRR+ YSRVLAEP V +GYS T A GG+G XXXX D PASEGFTSL+SNGDELLRLAEHCR+VVDS+VDAP LLAVGNIG+AALEWQKRI WFQ
Sbjct: 5 PRRPATASNQRHQAGKPQLLRDSTYSGGRRIKSSSAPPTATGS-RDANAGESTDHQDDYEVLPTAGLEINCPSETQEQLQ-PLQMYPLRPTVEKERTPLSYADVGQRTLRRRVTSTPTGDGNQEDDDQEDNGRVVRCEEPRL--DQGTTVVVGQKGAYTAESELVTNPFSSTPQNAADYHPADGDCQSAG-------GQDRGATVVLSSTVILSPRGRARNPT----PSTAF---AAEWRATSQDNEVDWAFSLSPRPHTAQDSYFGGASWHDPPT------AYSSNARCEQHWASSDAKSGQHGTSKDPAELLEILWGQGSVTAVHGKHELANDNLARTLFGNDEFAGDREIACFLASAAAAXXXXXXXXXXXXXLAAATAKFPAQETGGAHSSQRPPLLIPKATISLVAVPIHADDPSRRYNPYHLRIVSREVDGGLGAGRRDDLKGMPDDDGETSGNSSSED-----SLGERLPRWKKASCPPQ-GNHRRGSAEQRGSPGPALWVEEKQGQDDCRDIERAYICSDGVTYVNVHGETTFQSLNQWSKEKERFDTLSRMRFVRSYPAWKYVRAITTFVGRKRVNQLKDGVERGLITLDAVYSSAIQEIVVQLERVQSLCFVTAKKGATAEYTLDEFFDEQARNTVKCEREVMDVYDRQVPHIVG--------------------MMPSVHRPRDRGSPNKESSITGLQSDDQASSVAIAARRPSLEQVLLSTVNKATTRKAGGDIDNDDDERSAVEPPTSWSFAARQRYECARIARVFRFARQRIRQELRGLALDHGERLLGAVARRLVAVPEERGTGAANADGIVRGRAAAGE-RTQREQPR--AGRSGFDSRGREGXXXXXXXXXXXXXXRQPGVCDQEQGGREGDGXXXXXXADVVRHLVVRRRRNLRHEARPCDSWNKRWALAVDEGDMADLSTLALEASLLEDATGDGSEAGAEEGADLVVKWRKAFREAVTSTGGKRDSLVP----------------------------------------------------------------------------SRFSGEQKGVTEDVFLSAALKLSAACLGGIDAQLSEVSSDFSEEEGGEGEGLMVSGPAADENKQCEHARPI-YENKDHRNPTVLDASMWDAHCN-----------TDSLSGAGVAAH-PPRTGTSMRPEHLSEIYGIRTGPCGGISLKVDIRGNFEEWDLQVFPPLEDFVRRAKQAQVQVLTTLARVPCILEHPDVKPYQTMVEGYGLGFELPQGG--DEDIAS----ERENTSTSWEDTGGRSVAETTERMEQLAEGPMDECDWLQNLSEDPYYRGLQDKVTAVFLSLASSHNSVYRMVNGFRPLLQEFQGT-----------------SDPDAIAADVIASAKRTGSRAGSLDLSPVLLAKPTTEWLHSWYSRFERFRQTVRATQIDSPQALLSINATDLIAYLVALPEKCLEDVRLIGPRLMLNATAILGAVFRRCNAILSGGLQGVDAIGEKAVFLCQIGQWLWQLRDEVQKLQELGVLLKKIGCFDAWPS--PRLAAKTGSGPVPANGDGSSMPRSPPLVVTARKPAGITAFSPTKTSRGDG-NGKDATPT-NGVAGSEQQTGPXXXXXGKNNDSRGPAGKTC---GFFDDRGGYDFRAVENQTREATENVGFHLVVLQRSVDQAHINMRIASQEFSSLLRKVLSSSESALESLSRDIDRLEADILDPALSNASTDPTKACSRLEGYRQRLADLQEDQSRYHHYSGFLDKDVVRTLAKGGAKNQFEEENMRLVLERVGAERRQLVLKWEAQRTAVHIRQEWESSALIFCDADVMASQLSRAVRAHAFAVETARGADEVSASCEATLAHLGRVVEAVGFLHNRDLTAAYWERVEQAMPLREDLKRAARKEFMPALRHAAGLEKG-------------PPAD-INDNNGESFNQAEPPSAEVGENTAFEKTEVVDSVDPAATDLTDSVTGPS--------SSGTAKVFSSVATRVIPPKFDAGGKLRVSKAAAVVSSAAGRERRGDARRRAEVYEVFPMAAEWGGLSLATLLNHGLLEKIKYLECPGKPYAPRPLARNTISSMTCPPTDPHQELESVWEAAPMIFLWRFNEGAPAPGITKQSPTVDSDSLRRRRLYSRVLAEPALVQQGYSTGTIA-GGVGXXXXXXASDL--PASEGFTSLLSNGDELLRLAEHCRLVVDSIVDAPSPLLAVGNIGQAALEWQKRISWFQ 2066
BLAST of mRNA_P-littoralis_Contig140.28.1 vs. uniprot
Match: D8LEQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ0_ECTSI) HSP 1 Score: 945 bits (2442), Expect = 4.600e-291 Identity = 556/972 (57.20%), Postives = 664/972 (68.31%), Query Frame = 3
Query: 14172 KSNRKGSLAGPHSQPGDGVSYLEVCL-------HKNGSAPRRKRHKTIMEMVAHGVLINCKDVFSTSALTEHFARAVEMLKVPWPARPDSRPLVTPQDVTNTCKCLRQLALPWSPLLVLRSESRGMSREGGPESAFRLACALEGAGVVVMEAGAARMFTKIERVKGAITSTANYFLSIKTVLRTAVLACIGKGFRGPYLQKSQDGDEDLWLNPGSCQNSTPTAFPHHVKNQNGHASAAAAASH-ATSGVGNGGESPASNRFPPAGPMFATRTVVFVKGAANLWGAGDGEWALRALMDLVEGGDVRRLFSDAELLELAGAEEEHERRRTT------NGTYKPGVKENYSLTSRELAGAGADSRRPSSRQRWSRERSRNTCCNSRGNQILRWSCWTRGGIDFVYRRIVSYVRQSLTVALCLDDDEVATLCPSFPTLTTCPSVRLEEWSAGSMRLAASRSLSAHRFDRP-PATAVTKTATCAR--GLCSRLSGKGGVFLWSGATHANLVGGLAFGRFQSTVLAFRDPTVANVSPGADSGFSDRVGAHVAERIKKDANAAAEESEQLFDAWMAMAKPSCCIEVYQVVEACAGGGSVG----GGFMDEE------------SSSGDQGQPSWSAVKARCFRAMAEEGRGPRPASLGQVLLLFKHLCRSGCHR--QRAQTLRRALRAAESWGVYEARREAEKVCLKRRAKDVLDALDQNNQQVRRFHQERTRVQEFWSEKSKATREQRQAQYARNERVENMLQPIKAAYEASKYSLSSLQEEDMEFLCTLCLGADVFNATAGVSPHVATAAQQRKQKGLHPELAFVVETVAVLLGNMSSYPQWVGEWVRLKASPSARIIRALLLDPAIADRLNSFDPESEGGQRVVKLVIEKMNERAAAVAXXXXXXXEVISSNGAPRGANGGDEDPDDSEDSFPDTPATQYAKQMPLLPLKLDSRAGGLLAAWVQAAVVLVDSLCRA 16982
K KGSLAG G +SY+E+C +++ + PR KR + MVAHG+L+N KDVFS A+T++FARAVE+LKVPWPARPDS+P+VTPQDVTN CKCLRQL++PW+PLLVLR ESRGMSREGGPESAFRLA ALEG G+VVM+AG RM K E V GA + LR AVL CIGK +GP+L++S D +DLWLNPG C+ S A + ++N + + S ATS G S A + AGP+ T+TV+ VKGAANLWGAG+G+W LRALMDLVEGGDVRRLFSDAELLELA AEE+HE R + N + G + R +GA A S+ E R+ NS +I RWSCWTRGG DFVYRRIVS++RQ LTVALCLDD+EV L PSFP L+TCPS+RLE WS SM++ A+RSL A P PA+ + A R G S GKG V LWSGATHANLVG LAFGRFQSTV AF+DP +P A + VG+ VAE I+ D AAA+E+E+LFDAWMA A PS C+ V++ VE CAGG G GG ++ SS Q Q W +VKA+CFRAMAEEGRGPRPAS+ +VLLLFKHLCR GC R +RAQ L RAL AAE WGV++ARREAEK+ LK RAKDVLDAL QNN+QVR QE+T+VQEFW+E++K+TREQRQAQ R E VE L+PI +AYE S+ LS+LQEEDMEFLCTLCLG+ +FN+ AGVS HVA A QQRKQKGLH EL F++ETVAV+LGNMS YPQ VGEWVRLKASPS +IIRALLLDP IA+RL+SFDPESE GQR VKLVIE+M ER+ V + + D P + A YAK++P+L LKL+SRA GLLAAWVQA VVL D+LC A
Sbjct: 787 KHGSKGSLAGSREHSGGNISYVEICSKGDEGAGNESKTPPRSKRAEIPQTMVAHGILMNTKDVFSFGAITKYFARAVELLKVPWPARPDSKPIVTPQDVTNICKCLRQLSIPWNPLLVLRLESRGMSREGGPESAFRLASALEGTGMVVMDAGIGRMCAKTEIVNGAGPPREASSRTFNATLRKAVLTCIGKTSQGPHLERSGDVGDDLWLNPG-CRQSPDAAHAYSTSSRNDATTLTTSTSFSATSRDEKAGLSSAHSPSTGAGPLVPTKTVLLVKGAANLWGAGNGDWPLRALMDLVEGGDVRRLFSDAELLELAEAEEKHEARNPSGSCNMKNSSNGQGAATDGGRAKRSTSGASAAEEALSTGGVGDDEPGRS---NSAQPKISRWSCWTRGGTDFVYRRIVSHIRQCLTVALCLDDEEVIALGPSFPALSTCPSMRLESWSDRSMQMVAARSLGADLSKSPAPASGTDELARRERFSGPNSGFDGKGRVCLWSGATHANLVGLLAFGRFQSTVPAFKDPPT---TPAAGTTEGGDVGS-VAELIENDQFAAADEAERLFDAWMASADPSACVVVFRAVEECAGGSCDGVDCDGGTRSDDARVGGVNVEMDGSSRAGQDQGRWGSVKAQCFRAMAEEGRGPRPASIDEVLLLFKHLCRLGCRRLVERAQVLNRALAAAEHWGVHKARREAEKIQLKNRAKDVLDALSQNNEQVRHVQQEKTKVQEFWNEQTKSTREQRQAQLLRMEEVEKALEPIMSAYEVSRDLLSTLQEEDMEFLCTLCLGSSMFNSAAGVSSHVAEATQQRKQKGLHQELPFIMETVAVMLGNMSGYPQVVGEWVRLKASPSMKIIRALLLDPTIAERLSSFDPESETGQRAVKLVIEQMAERSTVDMSKTKVPDGVSKGVAGRQSGSXXXXXXXXXXDGCPASSAIHYAKKIPILALKLESRACGLLAAWVQATVVLFDALCTA 1750
BLAST of mRNA_P-littoralis_Contig140.28.1 vs. uniprot
Match: D8LEP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP9_ECTSI) HSP 1 Score: 797 bits (2059), Expect = 1.290e-247 Identity = 587/1374 (42.72%), Postives = 729/1374 (53.06%), Query Frame = 3
Query: 17856 MVSMEIIAACAGKGEILPVCSLEGGLHSDLALFLGSGVLPIAAAENKGENFDQQRGKEGPSTVGGVGGTGSDAF--VSVGVDLQSSTTTIVLKPGFRMILFETSSSXXXXXXXXXXXX-SSLIFLQDSPDALASVQLVRFGGVDSSGVAAADDG---MIYLRDYNPSAEDVERVSTASSIEDPGSGSNXXXXXXE--SKEAEDVPVPSFVLAGMGLTRQPGFEMSKTIGALLKEEITRAFPKELGPCVEVEQQEMEKSVAKIEGAQRDALAYSGQLGATHEAVIALLAARPPCFEEDLPRFTPDTTVPSGGEPTTGVTDDVEVDQNRVLNNLIETLFAYKTTLEKGIDTVPKCDRASQEQIAVTARRTEQLANRLTSSTLRFLARCGDMLHVWGLDPALYSPVFPGVRALVHGVIRRAADAMAARTQNGEGVLERIIVGNLTRSMATRVADECGWVVPLAALAVNNPRDLPADTWWDTFVALLADR-RGKDFEGGLSSRLTLGKLFHMVAAVDAGTVGGRTTMLDHSAADEEDNREDRTEMAYGN---------EAMVQGLAQVRVIVDPWLEYREAEAPKLANGEDNTSGGSASEAGDDE------TNRHGVILSPQRWDLGFDTSEWARDRGAAAVAALARDRGIPFDTNGRRVDEEEN-----NHFFRTLLQLWATAKTDRAMMNAMQAAEAKLFSGDETLYRLVFLEATMNCVFARLPGYVMCEASQWVRWIAKVRYSLSLVAGG-GDSSXVSSLRYLXXXXXXXXXXKQRMSEDMSLSTSSXSQEGDSNS--------------------------GSDSGEDGNKAKSTKNHPTPDEHLRETSDLSCTNGDAQPLAVAGEVKPPGSLGGEGVGHTKVRRDSRERMKIKLGLLDGLGTTAASGENGSNDASAESKMEINARASSLFGVPTSSTRGMISARKPYSSAAASRAAAN-DYALPHSG------PAGQGSKPTVDCPVSVNGHEDDSADEEEECKFITFVAETFRPQRDDSDWHKEAKPIPPPQNISTDATSTSDLTIADQEVTDAAKDENTDVADTGGADEIFTVAENIAVGEDKESDATQQIAPAVTSSTTPLGETGLESEAPAGSRVSFRTRKERRIKRGSQAKEKLATMSKQMFGRSALSHGGNEDRLSGVNTLRRAGKIHNIESIFSTVMTFSHQRKKRRHLLHVSIRELGSWSQRWNESPLIGIILLLALAPYGDLATKCAAACLMAEGGRDNLSRSSLWQEFKNESYVGDAQKGQIQLALELSRRWTPIVVIAPANDDMSDAVSRHFTSVLSHIERAAKKAGTTVIVHDASKPAHVLLSRGVLVAQTHRVQKGQSRAERNHSHLASNAVGGPATANM 21788
MVSM+IIAACA KGEILPVCS EGG+H DLALFLGS VLP+ AA +K +Q GK + G GG+ S+ F V+VG + QSSTT +V K GFR+ILF S +S++FL+DSP+AL+ VQL+RFGGVDS G+AA DDG + + S++ + XXXXXX SKE+ED +P FV GMGL QPG EMSKT+G L++E+ RA P P +E + QL ATHEAVI LLAARPPCF D+PR TPD TVPSGGEP +GV+DDVE DQNRVLNNLIETLFAYK+TLEKG DTV +C+RASQ Q A AR+ EQ+A RLTSS L+FLAR GD+LH G DP YSPVFPGVRALVH IRRAA M Q+ EG LER++VG+LTRSM TRV +C W+VPLAALAVNNP D PA WWD F L+ADR RG + G SR++L KLF MV A + G H+ E NR + + E+ QGL +V+ +V+ W E+ ++E PK+ D+ E GDDE T HG+ LSPQ+WDLGFDTS+WARDRGAAA A+ R++G PF +E + F +L LW A +DR+ MNA QAA+AK FSGD L RLV LEATMN VFARLPG+V+CEAS+W WI++V SLS V G G+++ + LR+L K + GD+NS G D D KAK T ++ + C+ DA A +GE+K G G H+KVRRDSRERMKIKLGL DGLG S E + SAE+ E ARASSLFG+ TS RG+ SA+K SSAAA+ A+ D +L S PA G+ P + ++V+ HED E+EE KFITFVAETFRPQRDDSDWHKE KP+P P STDA +T L +A+Q +V+ V +D S AT P ++ P+ + + SEA S+ + S Q ++ + GS P G A+ RSS+ ++ S V D+ T V+ PA D+++AVSRHF SVLS+IE AAK+AGTTV VHDASKPAH LLSRGVLV Q Q G SRA + A GG +TANM
Sbjct: 1 MVSMDIIAACAAKGEILPVCSTEGGVHIDLALFLGSNVLPVEAAGHKKPPRRKQDGKPESNAFGNGGGS-SECFGSVTVGEEPQSSTTFVV-KMGFRLILFARSLDFANPQPLKSSDDVTSMVFLEDSPEALSGVQLIRFGGVDSVGLAAGDDGGGCSLDTKGCESSSDGTSQXXXXXXXXXXXXXXXXXXXXXXXXSKESEDATIPPFVTGGMGLRCQPGLEMSKTMGGRLQDEMVRALP----PALEARGSD------------------ERQLSATHEAVITLLAARPPCFTPDVPRRTPDPTVPSGGEPPSGVSDDVERDQNRVLNNLIETLFAYKSTLEKGPDTVSRCERASQAQHAEAARKDEQVAYRLTSSALQFLARSGDVLHACGSDPVFYSPVFPGVRALVHSAIRRAAGTMRPPNQDREGDLERVVVGSLTRSMITRVPSDCTWIVPLAALAVNNPDDFPAKGWWDAFGTLVADRHRGSEESSGHFSRISLAKLFKMVTAAEKAGAGDN-----HAGIALESNRSPDGDPCHLEVHALGAGQVESATQGLYRVQAVVNSWREHHDSEVPKVTMVNDDHLHECIRETGDDEESDGDETIHHGITLSPQQWDLGFDTSDWARDRGAAAAASYKRNQGTPFGIEDGVDGPDERGSGNFDSFCFSLSSLWTAAVSDRSKMNATQAAQAKAFSGDGVLRRLVLLEATMNSVFARLPGFVLCEASKWSEWISEVCRSLSSVREGCGNNASIGWLRFLLSHPPPVFESKHSV--------------GDANSSXXXXXXXXXXXXXXXXXXXXASGEIGIDEAIDEEKAKRGPISETANDDI-------CSETDA---AFSGELKHR-EAPGAGAPHSKVRRDSRERMKIKLGLADGLGIAVGS-EQSDDIPSAETGKEFTARASSLFGISTSRLRGVASAKKLPSSAAANGVDADSDGSLRFSHTENVGTPATAGTTPDL---LNVSTHEDFDTGEDEESKFITFVAETFRPQRDDSDWHKEEKPVPAPLETSTDAKNTVALVVAEQSTA--------------------SVSTTTVVEDDMASMATH---PEDKTAKNPMIQQQMTSEA------------------------------------------------------------------VSSPVASSPQ----------TVDQDGS------------------ATPAGLGASP---------------ERSSICSPPQSTSTVEDSV--------------TVAKVMVPAGGDITEAVSRHFVSVLSNIECAAKEAGTTVTVHDASKPAHALLSRGVLVGQARGQQTGHSRARGRGNPAAVAINGGLSTANM 1170
BLAST of mRNA_P-littoralis_Contig140.28.1 vs. uniprot
Match: A0A6H5KDN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDN6_9PHAE) HSP 1 Score: 662 bits (1709), Expect = 8.360e-204 Identity = 452/1034 (43.71%), Postives = 551/1034 (53.29%), Query Frame = 3
Query: 17856 MVSMEIIAACAGKGEILPVCSLEGGLHSDLALFLGSGVLPIAAAENKGENFDQQRGK-EGPSTVGGVGGTGSDAFVSVGVDLQSSTTTIVLKPGFRMILFETSSSXXXXXXXXXXXX-SSLIFLQDSPDALASVQLVRFGGVDSSGVAAADDGMIYLRDYN--PSAEDV--------ERVSTASSIEDPGSGSNXXXXXXESKEAEDVPVPSFVLAGMGLTRQPGFEMSKTIGALLKEEITRAFPKELGPCVEV---EQQEMEKSVAKIEGAQRDALAYSGQLGATHEAVIALLAARPPCFEEDLPRFTPDTTVPSGGEPTTGVTDDVEVDQNRVLNNLIETLFAYKTTLEKGIDTVPKCDRASQEQIAVTARRTEQLANRLTSSTLRFLARCGDMLHVWGLDPALYSPVFPGVRALVHGVIRRAADAMAARTQNGEGVLERIIVGNLTRSMATRVADECGWVVPLAALAVNNPRDLPADTWWDTFVALLADRR-GKDFEGGLSSRLTLGKLFHMVAAVD----AGTVGGRTTMLDHSAADEEDNREDRTEMAYGNEAMVQGLAQVRVIVDPWLEYREAEAPKLANGEDNTSGGSASEAGDDE------TNRHGVILSPQRWDLGFDTSEWARDRGAAAVAALARDRGI----------PFDTNGRRVDEEENNHFFRTLLQLWATAKTDRAMMNAMQAAEAKLFSGDETLYRLVFLEATMNCVFARLPGYVMCEASQWVRWIAKVRYSLSLVAGGGDSSXVSSLRYLXXXXXXXXXXKQRMSEDMSLSTSSXSQEGDSNSGSDSGEDGNKAKSTKNHPTPDEHLRETSDLSCTNGDAQPLAVAGEVKPPGSLGGEGVGHTKVRRDSRERMKIKLGLLDGLGTTAASGENGSNDASAESKMEINARASSLFGVPTSSTRGMISARKPYSSAAASRAAAN-DYALPHSG------PAGQGSKPTVDCPVSVNGHEDDSADEEEECKFITFVAETFRPQRDDSDWHKEAKPIPPPQNISTDATSTSDLTIADQEVT 20828
MVSM+IIAACA KGEILPVCS EGG+H DLALFLGS VLP+ AAE K +Q GK E + + G G + V+VG + QSSTT +V K GFR+ILF S + ++FL+DSP+A + VQL+RFGGVDS G AA DDG D S+ DV E S SS D SN SKE ED +P V GM L QPG EMS +G L++E+ RA P P +E +++++ S A AQ++ALAYS QL A+HEAVI LLAARPPCF D+PR PD TVPSGGEP +GV+DDVE DQNRVLNNLIETLFAYK+T+EKG DTV +C+RASQ Q A AR EQ+A RLTS L+FLAR GD+LH G DP YSPVFPGV+ALVH IR A AM Q+ EG LER++VG+LTRSM TRV +C WVVPLAALAV NP D PA WWD F L+ADRR G + G SSR++L KLF MV A D + + G D S + D+ E T A +E+ QG+ +V+ +V+ W E+ ++E P + D+ S EAGDDE T + G+ LSPQRWDLGFDTS+W RD GAAA AA R++G P++ D F +L LW A +DR+ MNA QAA+AK FS D L RLV LEATMN VF RLPG+V+CEA+ GLG S E SAE+ E ARASSLFG+ TS RG+ SA+K SSAAA+ A A+ D +L S PA +G+ P + +N E+EE KFITFVAETFRPQRDDSDWHKE +P+P P ST A +T L +ADQ T
Sbjct: 1 MVSMDIIAACAAKGEILPVCSTEGGVHIDLALFLGSIVLPVEAAEEKKPPCRKQGGKPESNAFLNGGGSSECYGSVTVGEESQSSTTFLV-KMGFRLILFTRSLDFANPQRLKSPSNVTPMVFLEDSPEAFSGVQLIRFGGVDSVGSAAGDDGGCSSLDTKGCKSSSDVTSPELVAGEDTSGLSSPSDDNESSNSG-----SKEGEDATIPPLVTGGMRLRCQPGLEMSNAMGGRLQDEMVRALP----PALEARGSDERQVSASRAAFSIAQKEALAYSCQLSASHEAVITLLAARPPCFTPDVPRRAPDPTVPSGGEPPSGVSDDVERDQNRVLNNLIETLFAYKSTIEKGPDTVSRCERASQAQHAEVARNGEQVAYRLTSCALQFLARSGDVLHACGSDPVFYSPVFPGVKALVHSAIRNVAGAMRPLNQDREGELERVVVGSLTRSMTTRVPSDCTWVVPLAALAVGNPDDFPAKGWWDAFGTLVADRRRGGEEPSGDSSRISLAKLFKMVTAADKVGASDSHAGIAQESDCSPGRDPDHLEAHTLGAGQDESATQGVNKVQAVVNSWREHHDSEVPTVTTVNDDRERESVREAGDDEESDGDETIQPGITLSPQRWDLGFDTSDWVRDGGAAAAAAYNRNQGTSSGIEDGVDGPYERGAGNFDS-----FCFSLSSLWTAAVSDRSKMNATQAAQAKAFSSDGVLRRLVLLEATMNSVFGRLPGFVLCEAN----------------------------------------------------------------------------------------------------------------------------------------------GLGIAVGS-EQSDEIVSAETSKEFTARASSLFGISTSRLRGVASAKKLPSSAAANSADADSDESLRFSRTENVGMPAAEGTTPAL-----LNASTQFDTGEDEESKFITFVAETFRPQRDDSDWHKEDQPVPTPLETSTGAKNTVALVVADQSTT 871
BLAST of mRNA_P-littoralis_Contig140.28.1 vs. uniprot
Match: A0A835YHS2_9STRA (DHC_N2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHS2_9STRA) HSP 1 Score: 371 bits (952), Expect = 3.700e-98 Identity = 621/2230 (27.85%), Postives = 846/2230 (37.94%), Query Frame = 1
Query: 6220 ELYEVFPMAAEWGGLSLAVLFKHGLLERR--REIGSISAEATASAVLRKTLEELEGVWETAPMMFCWRFDEGTPAPGKTKQPPIVNEVSLRRRQQYSRVLAEPPAVSRGYSAATTAVGGLGGXXXXEGGDNTPPASEGFTSLMSNGDELLRLAEHCRV--------------------VVDSVVDAPPALLAVGNIGKAALEWQKRIYWFQELVTQWMAVQEQWVRLAPAFVAE--DPEDGVPLHEMFRFTDVSVSFQVILATLRA------------------------------------DSCMSVLAGKHQGVEKGGRSLLAKIRKLQEDLEVVSITMDRRVAWLCGSYTAV-CPRLLALPRHRLFRLFRGWVAGRVGSGASAGEMNERAACMFRGVGEIVWK---EIVSTTGGMTVR--THMAA-----AGVRSSGAGLEVVQF------------------------------LSPVPAVGRFEIWIRDIDRQLISAIAQDVETAAVALFQHC----------------KPGVGLGGSALLRHAGIAERVGDNHEVSGGGVASPIRPGVPTPLS---------------------------QSAEHEGQALAAAGEKLNDRRQPSVQGQLLARSAHWTTAVEAALSGTSIGTSLSP-GVG-SGGRGGEVSGATKKP---EHMLREILSTILLNVDGWVGELCQPGGIIA--YSSLTNTALTTQALQHRDVVEELLKTVSASXXXXXXXXDDGLSSATAGSATMSSFLEGREEESSGVGADGISPFLWMCHLRHYYTSPEEARFHNGGAQQESNGQLGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIRVGLGPWNVPYGFEYAGTLERLWLTPLSERCLLHAVHSAK--GRYGGLLVSASGTHRRQADPTRCSPAPSPPSPADISTVAQDVAIAFGRPFRLLHSGCVTSPQAVSSVIASTLMAGGVTVFAGVDELPKVSLAVLAESLRAVMLCLHAGQENVLINGE-EVSLSTRPH------LLPNFDPALHQWKLLSWDNRMTASTSYGSRQNNCGGGGGLFLGVFATLAKQGPSPKLPLSVRSAFRPVLTALPNTPLLLEAMLLTSGFVGARTLVQGLVQGLRELRASPRILPHESATRGAAVITAAAAVPSVDSISRGSAANSFEVRSSTDVATLLHAVAVKAVRTATGLLAAETARELRAARRKLGLDSLTSSERNEKTEHISRAVEARALIAGFVRALLLEEAGGDIRALKSQKTKKPTVSSSSGSKKLCDVPVPTGTATTAKETSTPTDAEQLEIDKRRAAMVMAFQQTEIF-----------------RGILQPLDDMAATGRKLAPQGNVKLRATELAASGTASRSRDMNVLKTLLKRALRVTGISPTRDQIDAATELWQALWSCSRPAVIVTGAAGVGKSSILQAMPRMAEDVGRTNRQLNRLL--------SKQAPTTGNKQDKAAGGNVKVKGRSKPDPTTQHPGASPLDPPGAIFAPPANTRGAAAYRQIVNRQLPFLAYITATAGFRK-------------GTARSSGSVASDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSQRSAATKSSAKSGSAGIRTVQTLSRRSGCAGVPRAALEGSAFVIPAQEIEVVYTGGCSAEHLLGSTDDKGSWLDGLLVRRLRVLVEGVRGGVHAGAALSRHRARGVGTGDVCPPTVGVSSGFSHGCKSRLLVLDGPVSRLLEGIIAGDYASAPS-------LTGLEE-----CGHDARCLLLPDGETLALDAWGHVAVETGDVRHLSPSTVTGVAIVHLRADGPALIGGMRDAW------------LKKLTRKSFQHPGTAGGTFRRVLVTTVSDFFSQEGFAEG----------GCCLEDTGDVKNAVSMESGTPASTCASRMRNTLLLLEGLLDVLVEIDEYAILWQPEVGRSGGKTKTKAEATHCSKCHANPMCNHGVSHIRIISEPIDTSPQHVFAFSTVGKPVRPQSSLVAGADEPTPDETIEEEDKTVTTHVIARQDDLTLAEIQDIEKCLRLRAFLLCVYASVWGMGGHLVGEASRTMCSAYVRQSSPVELRPHIRES--NLFDFVVDISRAKLIPIEEDASACPGALPRGIWSLDPHWALQASELSCPLPPSLVIPSHRLSTVATVAYTLLGMDCA---RVMVEGPTGAGKTALLSHLLKILGKGIPN 12198
E+ E PMAA WG L L VL GL + + ISAEATAS V+ +TL EL+ +W APM F WRF E G A G GG A E L+SNG LL L + V ++VV AP ALLA NI A W+ + WF ++ QW A Q Q VRL+P F D G+ E RF +V F+ +L +C V Q ++G R+LL K+ K++EDL+ + + R W+ + AV CPRLLALP H LF+L R W G V G G ++ + +F GVGE++++ + V + R +H A AGV SSGAGLE + F FE + + + A + VA + C KP GL G Q H + AA + +Q LLA AH+T+A EAAL S SL P G+G GGR SG P LR +L L +V+GW C + A Y L+ A TQAL RDV+++L + + ++SG +D S W CHLR YY + A XXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +GPW+V YG+EY GT ERLW+ PL+ER LLHA HSA+ G GGLL + +G + + C+P A D A AFGR +L + +TSP AV++++ + G V + D L ++ VL ESL + L AG +V++ EV L+ P + + P L QW+L + A G L G ++ G + LPL++R +FRPV P+ LL A+L G A L L+ G+R + A RG + ++ S+ D + AV + R +LA E R L A RKLGL +L +E+ + E + A EAR L A +++LL G + T +++ LC + G A + + +E + + + A Q + R P +D+ A S T + ++D V+ LL+ AL G+ P +Q+ AA +W++LWSC PAVI+ G GVGKS++L ++ MA V +N RL +K AP A + YR + NR +PF+AY +K T +S S AS XXXXXXXXXXXXXXXXXXXXXXXXXXXX ++S K A+ GSA RS G+P+ +E SAF +PAQ +EV+YTGGC LLG++D+ G W DGLL RRLR +G G S H RG P G SRL+VLDGP+SR LEG A A P L G DAR L LP+G L + A HVA E ++ L+PST+ VAIV L AL+ + AW +K R+ PG G + S+ + AE GCC E G + E T AST +R+ L +LEG+L W P+ G + T A +L+ VYA+ WGMG HL S R P R+ +LFD +D A+L+P+ ++ C G G W W + SEL+ LP +++PS R V V LL ++C V + GP GKTAL + +++ G P+
Sbjct: 1803 EVAETHPMAATWGLLPLGVLLDEGLSDEAVVARVAQISAEATASGVMARTLAELDSIWMNAPMRFEWRFRED------------------------------------GLELGGDAAHGSGGY-----------AQE--LQLLSNGRALLSLVDRSSAXXXXXXXXXXXXXXXXXXXAVANAVVGAPQALLATANIAVRATRWRADLQWFHAVLLQWEAAQAQLVRLSPLFFGPFGDARAGLAA-ERGRFLEVGGRFKRLLVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQACCHVAPLALQ--QEGSRNLLGKLSKVREDLDACARSAQR---WM--EFKAVTCPRLLALPAHDLFQLHRSWAQGVVQLGGGGGALDTQVNLLFPGVGELIYRACDDAVLRARLLEARGLSHAQASTQQTAGVCSSGAGLESLLFGVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFESAVSNSVTDGVEAWLDATQQRVVACMRTCLAATLSKLRDGSGWPAKP-TGLEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPRVHRLRRRAA-------EQSACLQASLLAHHAHFTSAAEAAL--LSPEPSLRPLGLGLGGGRPSFSSGGKPSPGGAAAALRGLLEETLEHVEGWAAT-CHDASLDAAQYPLLSACAHATQALHFRDVLQDLCAGIDSGAI-----------------------------DTSGRSSDPRSAPRWQCHLR-YYLNERAA-------------------PAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPYLVASIGPWSVAYGWEYHGTAERLWIAPLAERALLHAAHSARRAGGCGGLLTAPAGDAQ-----SLCAP-------------AWDAAAAFGRGMAVLSASSITSPHAVAALLRRVVAGGCVGLVTRADALSALARGVLVESLHVLRQALLAGHASVVLGAAAEVPLACAPQHPAVTAVTGGYMPELTQWRLAAAPGARPAFALPVFATLGGGSAAALSSGASSSWLGDGAAAPLPLALRVSFRPVAVVEPSVGTLLTALLHAHGCRYAVPLAAPLLGGVRAML---------RAVRGXXXXXXXXXXXXXXXXXXRA-----QLLSAMDDPSSRQAVFRRCARLCASVLAREKGRALTTADRKLGLSTLPRAEKRQLAEGLLAASEARVLAAAMLKSLLEVINGMASSGAGAXXXXXXTAAATP----LCVNWI--GGCLVAPLQAAMAPLQDMEKVGKMRSRLPAHMQAQXXXXXXXXXXXXXXXXDAARTTAGPGEDLLAIFDSGGSXXXXXXXXXXXXKSSTTAANKDEAVVMALLRSALSAGGLVPAPEQVRAAVAVWESLWSCRAPAVILCGPPGVGKSAVLHSLAHMARYV--SNNMARRLAVEVDRIQKAKAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXATPVTSLPYRTLGNRTVPFIAYAAHCNRLKKQRRSARGADAQSVATGKSGNSRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSTTAK--ARDGSA----------RS---GLPQVMME-SAFAVPAQRVEVLYTGGCEPHLLLGTSDETGLWCDGLLTRRLRAAAQGF------GDLYSAHGRRGAAH----EPPPGER-------PSRLVVLDGPLSRALEGG-ASQQARGPGWHDRLVRLGGAANREPPAAAADARRLCLPEGAWLQMGAMLHVAAEAVNIAQLAPSTLAAVAIVPLSPPRDALVYSLVAAWAARVRAAPWPDVVKSTLREIICAPGAERGRSSGSGGSVASNSAAAAPAAEVFPPVSELIALGCCFEQDGPQSCRCAPE--TSASTAVARVTAMLRILEGMLP-----------WLPQDGAAARGTAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTL--------------------------------------------VWLMSVYAAGWGMGAHL-------QASGCGRARRRARAPPATRDGAVSLFDCTLDARAARLVPVGDE---CRGGSGGGSWRAPRFWGVHHSELAGALPACVLVPSPR---VRAVGEALLTLNCKLRLNVALRGPPLCGKTALAAAVMRAAGAAAPH 3769
BLAST of mRNA_P-littoralis_Contig140.28.1 vs. uniprot
Match: D8LEQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ2_ECTSI) HSP 1 Score: 249 bits (635), Expect = 8.690e-67 Identity = 226/561 (40.29%), Postives = 283/561 (50.45%), Query Frame = 1
Query: 283 PRRPSTTSGRPYRAGRHHRGQMAHASGRQLVQPWSAPPEVVDSGREAGSDDGA-----------------CEERELQESRQHPQQNYPLRPVGEKERARQPYTNASQRTIRNTATSTPSDEGNLEVGNDGGHDEKTPWVEARL--GPDVSTPRPIAEAESSALLGHLHSTRQRTVEGDEDAWSQSMEGEEEEGAERSASVVLSSNVLLSPRGRARTPTLLVGDDSHFSPKATDCRVASPDGGDDWVYDLRPRSHIAE-----GISGTSRPTRCHAPAASSPNAPQNQLRMSSDAVIRQHVLTKEHAELVESLWTQGSV-LGH----VEKNNPARVVFGTDEFAGDREIACFLATAAAMAEIEAXXXXXXXXXXXXXXELSVSGTAEAHTLERWSLLPPEAGSILVAVPLHAGDLSRRYNPYHLRIVDRVVEGGGRQGRREGTKEMFDGDHEISGNWNGEELPEKASLSET--RVTFALDSGGGECGCYKKEPEQAPGYEKKCFGVEEERRE--C-DVERAYFSLQGVTLVNVHGETSFQPLEEWRLEKERFDHIYGMSFVR 1863
PRRP T S + ++AG+ + + SG + ++ SAPP + R+A + + C L P Q YPLRP EKER Y++ QRT+R TS+P+ EGN E + + E RL G V + A++ + ST Q + G ++ GA +VVLSS VLLSPRGRART T + F A + R S D DW Y L PR H + G S PT A S NA Q SDA QH +K+ A+L+E LW QGSV H + +N AR +FG DEFAGDREIACFLA+AAA XXXXXXXXXXXXX T H+ +R LL P+A LVAVP+HA D SRRYNPYHLRIV R V+GG GR + + M D D E SGN + E+ S ET RV A G E +PG G+EE++ + C D+ERAY GVT VNVHGET+FQ L +W EKERFD + M FVR
Sbjct: 5 PRRPGTASDQRHQAGKPQLLRDSTYSGGRRIKSSSAPPTAAGT-RDANAGESIDHQDDYEVLPTAGLEIHCRSETL--GPLQPSQIYPLRPTVEKERTPLSYSDVGQRTLRRRETSSPTGEGNQEADDQEDYGRVVRCEEPRLDQGTTVVGQKGAYTADNELVTNPFFSTPQNAADYHPAEGDCQSAGRQDRGA----TVVLSSTVLLSPRGRARTST----PSTAF---AAEWRAVSQDNEADWAYSLSPRPHTTQDSYFGGGSWHDPPT------AYSSNARCEQRWAPSDAKSGQHGTSKDPADLLEILWGQGSVSAAHGRHGLANDNLARTLFGKDEFAGDREIACFLASAAAXXXXXXXXXXXXXXXXXXXANFPAQETGGTHSSQRPPLLIPKATISLVAVPIHADDPSRRYNPYHLRIVSREVDGGLGAGRGDDLEGMPDDDGETSGNSSNED-----STGETLPRVQKASCPPQGNRRRRSAEQRGSPG---TALGLEEKQGQDDCRDIERAYICSDGVTYVNVHGETTFQSLNQWSKEKERFDTLSRMRFVR 537 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig140.28.1 >prot_P-littoralis_Contig140.28.1 ID=prot_P-littoralis_Contig140.28.1|Name=mRNA_P-littoralis_Contig140.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=4702bp MLGLLSTPSVGRISKDGRKAKRALRRRIKPKQQRCTEHMRGPVIDQPSRGback to top mRNA from alignment at P-littoralis_Contig140:106956..162289+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig140.28.1 ID=mRNA_P-littoralis_Contig140.28.1|Name=mRNA_P-littoralis_Contig140.28.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=55334bp|location=Sequence derived from alignment at P-littoralis_Contig140:106956..162289+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig140:106956..162289+ >mRNA_P-littoralis_Contig140.28.1 ID=mRNA_P-littoralis_Contig140.28.1|Name=mRNA_P-littoralis_Contig140.28.1|organism=Pylaiella littoralis U1_48|type=CDS|length=14106bp|location=Sequence derived from alignment at P-littoralis_Contig140:106956..162289+ (Pylaiella littoralis U1_48)back to top |