mRNA_P-littoralis_Contig14.251.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: A0A6H5JY97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE) HSP 1 Score: 214 bits (544), Expect = 3.110e-58 Identity = 113/251 (45.02%), Postives = 161/251 (64.14%), Query Frame = 1
Query: 325 RSLSRGRWRGRSLHVKLLAMHAAAALSHAGGVLKYALPVSDTSCLVTHRIFVCFTLLFDASLVTFLLAKVHVTTGGGNLRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEG---TFCYNGFASGEDDAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNETADNNQAAQVRDMAIAVNQLVVLCLTEVSLPLGFASCCKA 1068
R+ S G + R LH+ LL H + ++ V KY LPV++ +C TH++ V LL+DASL+TFLLAKVHVT G L WE IVW++R YAW+YLP+ + + F G N E TFC NG+ +D ++N + + LV+Q VLLL +F++P+LV EG+QSG A+Y+ VV++N+ CT +VTAY + T V + AL+ ++ D+N A+ D+ VNQ V LCLTE++LPLGF+SC KA
Sbjct: 72 RTHSAGSPQVRFLHITLLVTHFVSVITGVAAVFKYTLPVTEANCTATHKVLVSMILLYDASLLTFLLAKVHVTNGHRKLAWWETVIVWISRGYAWIYLPIVAVVIPYQFRGGTNDEASVKTFCVNGYHMDDDTDEVNDNVLGYGSNMGSLVIQFVLLLILFVRPLLVRLEGSQSGEAMYRMVVIKNITCTIAVVTAYAVTTVVVIAALIRQSNDSNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKA 322
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: A0A6H5JPA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE) HSP 1 Score: 205 bits (522), Expect = 3.630e-56 Identity = 119/237 (50.21%), Postives = 150/237 (63.29%), Query Frame = 1
Query: 352 GRSLHVKLLAMHAAAALSHAGGVLKYALPVSDTSCLVTHRIFVCFTLLFDAS----------LVTFLLAKVHVTTGGGNLRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEGTFCYNGFASGEDDAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNETADNNQAAQVRDMAIAVNQLVVLCLTEV 1032
GR+LH +LLAMH A+++ G KY LP SDTSC V+HR ++ L +D S LV FLLAK VT G L WE GI W +R +AW+YLPV+ LGL FPG NSEGT C+N + E + + FA +N +L VQ VLLL +F+KPMLV TQSGGA+Y+RVV+RN+VCT I AYVI T V VLALL+ D ++AA V D+ ++N V LCLTEV
Sbjct: 8 GRTLHRRLLAMHVVASVNMGAGAAKYMLPPSDTSCRVSHRAWIASLLFYDVSAPQAVADGACLVLFLLAKTSVTNGNRTLTSWENGITWWSRFWAWIYLPVSGTVLGLSFPGEVNSEGTACFNSYGE-ETETREVGDVAGFAGNNVLLTVQYVLLLAMFIKPMLVSHGNTQSGGAVYRRVVIRNIVCTIGIACAYVITTVVVVLALLSSRPDTDKAAAVGDIVPSINICVTLCLTEV 243
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: D7G2C9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI) HSP 1 Score: 199 bits (505), Expect = 9.150e-55 Identity = 113/223 (50.67%), Postives = 147/223 (65.92%), Query Frame = 1
Query: 559 LRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEGTFCYNGFA-SGEDDAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNETADNNQAAQVRDMAIAVNQLVVLCLTEVSLPLGFASCCKAIGT----VRKQEGQA-----SRPVNGAADAV-----TKTKVIPVEVLPPQIP 1182
L WE+ I W +R Y WVYLP+ + LG FPG + GTFCYNG +G + TS NA+SF ++N +LVVQ +LLLG+F++PMLV EG QSGGA+Y+RVV+RNV CTA IV +Y I T V V+ALL E+ ++N++AQ+RD+A+A N L LCLTE++LPLGF SC KA T + QA + P AA A T K+IP+E LPPQ P
Sbjct: 2 LAWWEKAIRWWSRLYGWVYLPLMALMLGTRFPGGTDPAGTFCYNGIVPTGASELTTSNNAQSFGINNVLLVVQFILLLGLFVQPMLVRVEGAQSGGAVYRRVVLRNVFCTAGIVISYAITTLVVVIALLRESVESNKSAQIRDVALAANSLGTLCLTEITLPLGFRSCMKACSTGTAMANSTKTQAVGQTTANPGTAAAGATIISTTTTIKIIPLEELPPQAP 224
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: D8LG97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG97_ECTSI) HSP 1 Score: 194 bits (492), Expect = 1.190e-51 Identity = 103/210 (49.05%), Postives = 144/210 (68.57%), Query Frame = 1
Query: 328 SLSRGRWRGRSLHVKLLAMHAAAALSHAGGVLKYALPVSDTSCLVTHRIFVCFTLLFDASLVTFLLAKVHVTTGGGNLRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEGTFCYNGFASGED---DAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNE 948
S S G + R LH+ LL H A ++ A VLKYALPV+ ++C TH++ F +LFDASL+TFLL KV VT G L WE+G++W+ RA+AW+YLP+A I + +PG N EGTFC NGF ED + S+NA +A+ N++L+VQ VLLL +F++P++V EG QSGGA+Y+ VV+RN+ CT +V +Y+I T V V+ALL +
Sbjct: 89 SASAGSPKVRFLHIALLLEHIVALIAIASTVLKYALPVTASNCNATHKVSTAFAILFDASLLTFLLFKVDVTNGIRKLSCWEKGVIWICRAFAWIYLPLASIFVSATYPGGTNEEGTFCENGFKRDEDVNYEREASDNAYGYAVTNAMLLVQYVLLLILFVRPLMVRLEGAQSGGAVYRSVVIRNISCTVAVVVSYIITTIVTVIALLRQ 298
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: D8LN54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN54_ECTSI) HSP 1 Score: 190 bits (483), Expect = 1.320e-51 Identity = 102/189 (53.97%), Postives = 129/189 (68.25%), Query Frame = 1
Query: 352 GRSLHVKLLAMHAAAALSHAGGVLKYALPVSDTSCLVTHRIFVCFTLLFDASLVTFLLAKVHVTTGGGNLRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEGTFCYNGFASGEDDAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMT 918
GR+LH +LLAMH A+++ + G KY LP+SDTSC V+HR ++ L +DA LV FLLAK VT G L WE+GI W +R +AW+YLPV+ LGL FPG NSEGT C+N + D A + A FA +N +L VQ VLLL +F+KPMLV TQSGGA+Y+RVV+RN+VCT I AYVI T
Sbjct: 8 GRTLHRRLLAMHVIASVNMSAGAAKYMLPLSDTSCRVSHRAWIASLLFYDACLVLFLLAKTGVTNGNRTLTCWEKGITWWSRFWAWIYLPVSATFLGLTFPGEVNSEGTACFNSYREETDTAEVGDVA-GFASNNVLLTVQYVLLLAMFIKPMLVSQGNTQSGGAVYRRVVIRNIVCTIGIACAYVITT 195
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: D8LG96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG96_ECTSI) HSP 1 Score: 193 bits (490), Expect = 3.290e-51 Identity = 105/248 (42.34%), Postives = 146/248 (58.87%), Query Frame = 1
Query: 325 RSLSRGRWRGRSLHVKLLAMHAAAALSHAGGVLKYALPVSDTSCLVTHRIFVCFTLLFDASLVTFLLAKVHVTTGGGNLRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEGTFCYNGFASGEDDAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNETADNNQAAQVRDMAIAVNQLVVLCLTEVSLPLGFASCCKA 1068
R+ S G + R LH+ LL H + ++ + KY LPV+ +C TH++ V LL+DASL+TFLLAKVHVT G L WE IVW++R YAW+YLP+ + + F G N E TFC NG+ +D EN R + + L++Q VLLL +F++P+LV EG+QSG AIY+RVV++N+ CT +VTAY + T V + ALL + D+N ++LPLGF SC KA
Sbjct: 72 RTHSAGSPQVRFLHITLLVTHVVSVMAVVAALFKYTLPVTVENCTATHKVLVSMLLLYDASLLTFLLAKVHVTNGHRKLAWWETAIVWISRGYAWIYLPIVAVAIPYQFRGGTNDERTFCINGYNMDDDADEVHENIRGYGSNMGSLIIQFVLLLILFVRPLLVRLEGSQSGEAIYRRVVIKNITCTIAVVTAYAVTTVVVIAALLRQNNDSNT---------------------IALPLGFTSCWKA 298
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: A0A6H5JQ65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ65_9PHAE) HSP 1 Score: 189 bits (481), Expect = 6.380e-51 Identity = 102/201 (50.75%), Postives = 140/201 (69.65%), Query Frame = 1
Query: 355 RSLHVKLLAMHAAAALSHAGGVLKYALPVSDTSCLVTHRIFVCFTLLFDASLVTFLLAKVHVTTGGGNLRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEGTFCYNGFASGED---DAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNE 948
RSLHV L+ H A ++ A VLKYALPV+ ++C TH+I F +LFDASL+TFLL KV VT G L WE+G++W+ RA+AW+YLP+A I + +PG +GTFC N F ED + S+NA +A+ N++L+VQ VLLL +F++P++V EG QSGGA+Y+ VVVRNV CTA +V +Y+I T V V+ALL +
Sbjct: 52 RSLHVALVVEHIVALIAIASTVLKYALPVTASNCNATHKISTAFAILFDASLLTFLLFKVDVTNGMRKLSCWEKGVIWICRAFAWIYLPLASIFVSATYPGANIYQGTFCENSFNRDEDVNYEREASDNAFGYAVTNAMLLVQYVLLLILFVRPLMVRLEGVQSGGAVYRSVVVRNVSCTAAVVVSYIITTIVTVIALLRQ 252
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: A0A6H5JPA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE) HSP 1 Score: 188 bits (478), Expect = 2.160e-49 Identity = 110/246 (44.72%), Postives = 144/246 (58.54%), Query Frame = 1
Query: 334 SRGRWRGRSLHVKLLAMHAAAALSHAGGVLKYALPVSDTSCLVTHRIFVCFTLLFDASLVTFLLAKVHVTTGGGNLRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEGTFCYNGFASGEDDAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNETADNNQAAQVRDMAIAVNQLVVLCLTEVSLPLGFASCCKAI 1071
S G R R+LH +LLAMH A + + G KY VS+ SCL T R V LL+DASLV FL+ K VT G L +WE I W +R Y WV L + L V + EGTFC ED+ T + F ++N IL++Q LLL +F+KP+++P TQSGGA+Y+R+V+RNV CT I Y + T + VL L + +AAQ+ D+ N V LCLTE+SLPLGF+SC KAI
Sbjct: 58 SAGGSRVRALHKRLLAMHFIAIANMSAGCAKYMPDVSELSCLATRRAMVATILLYDASLVLFLVGKTSVTNGNRALAIWEACITWWSRFYGWVVLTTGALFLAAQASSVPSLEGTFCLT-LDLKEDEDVTFSDTLGFVINNGILIIQFALLLAMFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEISLPLGFSSCVKAI 302
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: A0A6H5K249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE) HSP 1 Score: 153 bits (387), Expect = 8.850e-39 Identity = 85/191 (44.50%), Postives = 112/191 (58.64%), Query Frame = 1
Query: 499 DASLVTFLLAKVHVTTGGGNLRLWERGIVWLTRAYAWVYLPVAIIGLGLGFPGVANSEGTFCYNGFASGEDDAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNETADNNQAAQVRDMAIAVNQLVVLCLTEVSLPLGFASCCKAI 1071
ASLV FL+ K VT G L +WE I W +R Y WV L L V + EGTFC ED+ T +A F ++N IL++Q LLL +F+KP+++P TQSGGA+Y+R+V+RNV CT I Y + T + VL L + +AAQ+ D+ N V LCLTE+SLPLGF+SC KAI
Sbjct: 12 QASLVLFLVGKASVTNGNRALAIWEACITWWSRFYGWVVLTTGAFFLAAQASSVPSLEGTFCLT-LDLQEDEDVTFSDALGFVINNGILIIQFALLLAIFVKPLMIPQGHTQSGGAVYRRLVMRNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTELSLPLGFSSCVKAI 201
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Match: D8LN45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI) HSP 1 Score: 107 bits (267), Expect = 5.790e-23 Identity = 60/138 (43.48%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 658 VANSEGTFCYNGFASGEDDAGTSENARSFAMHNSILVVQLVLLLGVFLKPMLVPAEGTQSGGAIYKRVVVRNVVCTACIVTAYVIMTAVAVLALLNETADNNQAAQVRDMAIAVNQLVVLCLTEVSLPLGFASCCKAI 1071
V + EG FC E++ T + F +N ILV+Q VLLL +F+KP+++P QSGGA+Y+R+V+RNV CT I Y + T + VL L + +AAQ+ D+ N V LC+TE+SLPLGF+SC K+I
Sbjct: 35 VPSPEGNFCL-ALDLQENEDVTFSDTLGFVFNNGILVIQFVLLLAMFVKPLMIPQGHIQSGGAVYRRLVMRNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCVTEMSLPLGFSSCVKSI 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig14.251.1 >prot_P-littoralis_Contig14.251.1 ID=prot_P-littoralis_Contig14.251.1|Name=mRNA_P-littoralis_Contig14.251.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=268bp MHAAAALSHAGGVLKYALPVSDTSCLVTHRIFVCFTLLFDASLVTFLLAKback to top mRNA from alignment at P-littoralis_Contig14:1020624..1029034- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig14.251.1 ID=mRNA_P-littoralis_Contig14.251.1|Name=mRNA_P-littoralis_Contig14.251.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8411bp|location=Sequence derived from alignment at P-littoralis_Contig14:1020624..1029034- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig14:1020624..1029034- >mRNA_P-littoralis_Contig14.251.1 ID=mRNA_P-littoralis_Contig14.251.1|Name=mRNA_P-littoralis_Contig14.251.1|organism=Pylaiella littoralis U1_48|type=CDS|length=804bp|location=Sequence derived from alignment at P-littoralis_Contig14:1020624..1029034- (Pylaiella littoralis U1_48)back to top |