prot_P-littoralis_Contig1397.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1397.2.1
Unique Nameprot_P-littoralis_Contig1397.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length209
Homology
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BLAST of mRNA_P-littoralis_Contig1397.2.1 vs. uniprot
Match: A0A0L0FQP7_9EUKA (EGF-like domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQP7_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 4.010e-7
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0 
Query:  159 SKTCP-TCGNGGVCNTLTGKCACLGLWTGLTCDRAIGDFSVPAAASSWYKP 208
            +K CP  C   G C+  +G+C+C   WTGL C+R IGDF +P    +WYKP
Sbjct:    8 AKECPYDCWGNGACDPFSGRCSCNSRWTGLYCERIIGDFRIPEHNKTWYKP 58
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1397.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0L0FQP7_9EUKA4.010e-747.06EGF-like domain-containing protein (Fragment) n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainPROSITEPS00022EGF_1coord: 178..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1397contigP-littoralis_Contig1397:2758..4682 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1397.2.1mRNA_P-littoralis_Contig1397.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1397 2756..4682 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1397.2.1 ID=prot_P-littoralis_Contig1397.2.1|Name=mRNA_P-littoralis_Contig1397.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=209bp
LQSCPRDCGECVADGDGICAYPFEDAGVGDCEGSSITNFIAYGGEEYATI
DNAEVLDGDYDDNSCTSSPVSVPAGWRIASWDADVAFNLIKTEGAVFDTY
CLVFEEGIAASSDTGLHDGAWETGCGIVPILRFNGNKFAINPDSCASRIM
IQRIKATGSKTCPTCGNGGVCNTLTGKCACLGLWTGLTCDRAIGDFSVPA
AASSWYKPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom