prot_P-littoralis_Contig139.129.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig139.129.1
Unique Nameprot_P-littoralis_Contig139.129.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length201
Homology
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BLAST of mRNA_P-littoralis_Contig139.129.1 vs. uniprot
Match: A0A6H5KRI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI1_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 2.660e-97
Identity = 159/209 (76.08%), Postives = 161/209 (77.03%), Query Frame = 0 
Query:    1 MDMDTATVSTPARQSLGTRPAVTPTPSAKKDEDERRKRRTSGPRAVGTDAQQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHCTAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVK--------DEDLACYYGLKKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTSK 201
            MDMDTATVSTPARQSLGTRPAVTPT SAKKDEDERRKRRTSGPRAVGTDAQQAT D TKGNGPNYP GF+PGREGSDGAKLPVYMFLQQG LEEGVQEH TA VHA VARWWSS ADSNEDRAFTGN TSTGKILA+VVK        DEDLA YYGLKKSFSG                            WAEEY ADGSWKFKTSK
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPCGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTTAEVHAHVARWWSSYADSNEDRAFTGNRTSTGKILASVVKADLYIPRQDEDLAFYYGLKKSFSG----------------------------WAEEYSADGSWKFKTSK 202
[Close]
BLAST of mRNA_P-littoralis_Contig139.129.1 vs. uniprot
Match: A0A6H5K1G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G6_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.260e-56
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0 
Query:    1 MDMDTATVSTPARQSLGTRPAVTPTPSAKKDEDERRKRRTSGPRAVGTDAQQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHCT 101
            MDMDTATVSTPARQSLGTRPAVTPT SAKKDEDERRKRRTSGPRAVGTDAQQAT D TKGNGPNYPRGF+PGREGSDGAKLPVYMFLQQG LEEGVQEH T
Sbjct:   22 MDMDTATVSTPARQSLGTRPAVTPTQSAKKDEDERRKRRTSGPRAVGTDAQQATHDSTKGNGPNYPRGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTT 122
[Close]
BLAST of mRNA_P-littoralis_Contig139.129.1 vs. uniprot
Match: A0A6H5K994_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K994_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 2.990e-12
Identity = 39/61 (63.93%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:  140 KDEDLACYYGLKKSFSGRSTTWVLSRSSLARERADAQWSFC--LPAGWAEEYGADGSWKFK 198
            +DEDLA YYGL+K  S + T WVLSRSSL  ERA+A  SF   LPAGW EE+G D SW FK
Sbjct:   63 RDEDLAQYYGLRK-VSSKPTKWVLSRSSLGEERAEAHISFGFGLPAGWCEEFGPDHSWTFK 122
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KRI1_9PHAE2.660e-9776.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1G6_9PHAE1.260e-5694.06Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K994_9PHAE2.990e-1263.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:501539..502495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.129.1mRNA_P-littoralis_Contig139.129.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig139 501535..502495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig139.129.1 ID=prot_P-littoralis_Contig139.129.1|Name=mRNA_P-littoralis_Contig139.129.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=201bp
MDMDTATVSTPARQSLGTRPAVTPTPSAKKDEDERRKRRTSGPRAVGTDA
QQATPDLTKGNGPNYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHC
TAGVHARVARWWSSNADSNEDRAFTGNCTSTGKILAAVVKDEDLACYYGL
KKSFSGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTS
K
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