mRNA_P-littoralis_Contig1006.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1006.5.1
Unique NamemRNA_P-littoralis_Contig1006.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: D8LL85_ECTSI (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LL85_ECTSI)

HSP 1 Score: 626 bits (1615), Expect = 1.510e-220
Identity = 289/350 (82.57%), Postives = 315/350 (90.00%), Query Frame = 1
Query:  535 MFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584
            MFE  T MW AY+M   YTM  L  DD  T +ARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGF VSGREA CV+LYRLAFPCRLKD RLVFGLSESCI E+FNWMLHFL+FKWGWLLSLDVERL P+LVEF+EAIYN+  PLTHCWGFIDGTVRGIARP RFQR YYNGHKRKHA+KFQGV+TPDG+FVD+WGPV+GTRHD+YLLAQSGLMQK+ATH NSPSGHPYCLYGDPAYGLS+HL  PFS +++GPLTP+MADFN+RMSHCRV VEWGFKEMT KW FV+MKPQQK+LLSPVG QY VATLLSN HSCLNGGNQISQ+F V PP+L+EYLKV
Sbjct:    1 MFEAYTDMWMAYNMAFIYTMASLVTDDAATRVARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFAVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCISETFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHSNSPSGHPYCLYGDPAYGLSDHLACPFSASSHGPLTPDMADFNQRMSHCRVAVEWGFKEMTSKWTFVDMKPQQKYLLSPVGKQYLVATLLSNIHSCLNGGNQISQFFDVQPPTLQEYLKV 350          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5KB08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB08_9PHAE)

HSP 1 Score: 600 bits (1546), Expect = 2.130e-210
Identity = 274/331 (82.78%), Postives = 305/331 (92.15%), Query Frame = 1
Query:  592 MTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584
            M RL +DDTPTS+AR D T FFSPQDC+NFLRFTQ Q+MLMLDLLLIPAFIRTDC FVVSGREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FNWMLHFLDF+WG+LLSLDV RL P L+EF+EAI+NSG PLTHCWGFIDGTVRGIARPK +QR++YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRHD+++LAQSGLM+K++   NSP+GHPYCLYGDPAYGLSNHL+ PFS ++ GPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFV+MKPQQKFLLSPV  QYRVATLLSNWHSC+NGGN+ISQYFGV PP+ EEY+ V
Sbjct:    1 MARLELDDTPTSIARSDATAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCEFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKYWQRLFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVSMKPQQKFLLSPVAKQYRVATLLSNWHSCMNGGNEISQYFGVVPPTFEEYVAV 330          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5JS57_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS57_9PHAE)

HSP 1 Score: 580 bits (1495), Expect = 3.130e-201
Identity = 272/382 (71.20%), Postives = 316/382 (82.72%), Query Frame = 1
Query:  439 PLPSNHATMTRLHIRARNARKKRALVLLQCRNMFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584
            P  S+H   + L IR R ARKKRAL+ +Q +  + + T MWFA H    YT+ RLA+DD PT  ARR V NFFSPQDC+ F+RFT+ QI+LML+LL++PA IRT+CGFVV GREA CV+LYRLAFPC LKD RL FGLSESCICE+FNWMLHF+DFKWG+LLSLDV+RLVPKL  F+EA+YN G PLTHCW FIDGTVRGIARP R +R +YNG+KRKHA+KFQGVVTPDG+FVDL+   +GT HD YLLA+S L++K+ TH NSPSGHPYC+YGDPAYG ++H+  PFS + NGPLTP M  FNK MS CRVTVEWGFKEMT KWAFV+MK QQKFLLSPV  QY+VATLLSN+HSCLNGGNQISQYFGV PP+LEEYLKV
Sbjct:   40 PRASHHVPPS-LRIRDRIARKKRALLPMQWQQSYSLYTSMWFASHFAVIYTLGRLAIDDIPTGAARRHVDNFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGFVVGGREALCVLLYRLAFPCCLKDMRLDFGLSESCICETFNWMLHFMDFKWGFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNKRFFYNGYKRKHAIKFQGVVTPDGLFVDLYDAEVGTTHDGYLLAESTLLEKLQTHMNSPSGHPYCVYGDPAYGQTDHIQCPFSASVNGPLTPAMRKFNKSMSQCRVTVEWGFKEMTSKWAFVDMKCQQKFLLSPVATQYKVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 420          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5KH29_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH29_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 2.020e-191
Identity = 274/388 (70.62%), Postives = 299/388 (77.06%), Query Frame = 1
Query:  550 THMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLM------------------------------------------LDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKL-VEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584
            T+MW AY+M   YTM  L  DD  TSLARRD  NFFSPQDCINFLRFTQPQ  L+                                          LDLLLIPAFIRTDCGF+VSGREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FN MLHFLDFKWGWLLS+DVERL P+L VEF+EAIYN+G PLTHCWGFID T+RGIAR     R+        HA+KFQGVVTPDG+FVDLWG V+GTRHD+YLLAQSGLMQK+A HFNSPSG PYCLYGDPAYGLS+HL+ PFS  + GPLTPEMADFN+RMSHCRVTVEWGFKEMT KWAFV+MK QQK+LLSPVG QYRVATLLSN HSCLNGGNQISQYF + PP+LEEYLKV
Sbjct:   25 TYMWMAYNMAFIYTMASLITDDVATSLARRDAANFFSPQDCINFLRFTQPQTTLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNRMLHFLDFKWGWLLSVDVERLKPRLLVEFAEAIYNAGCPLTHCWGFIDETIRGIARV----RLADTHQLSIHAIKFQGVVTPDGLFVDLWGLVLGTRHDSYLLAQSGLMQKLAAHFNSPSGRPYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMADFNQRMSHCRVTVEWGFKEMTSKWAFVDMKSQQKYLLSPVGKQYRVATLLSNMHSCLNGGNQISQYFNLQPPTLEEYLKV 408          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5KLS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLS3_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 8.870e-175
Identity = 244/311 (78.46%), Postives = 273/311 (87.78%), Query Frame = 1
Query:  652 FFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584
            FFSPQDC+NFLRFT  QI +ML+LLLIPAFIRT CGFVVSGREA CV+LYR+AFPCRLKD  LVFG+SES ICE+F WMLHFLDFKWG+LLSL VE +  +L+EF+EA+YN+G PL  CWGFIDGTVRGIARPKR+QR++YN HK KHA KFQGVVTPDG+F DLWGPV+GTRHDNY+LAQSGLMQK+A   NSPSG PY LYGDPAYGLSNHL+ PFS ++ GPLTPE+ADFNKR+S CRVTVEWGFKE+   WAFVNMK QQK LLSPV +QYRVATLLSNWHSCLNGGN+ISQYFGV PPS EEYL V
Sbjct:  388 FFSPQDCVNFLRFTILQITVMLELLLIPAFIRTTCGFVVSGREALCVLLYRMAFPCRLKDMPLVFGMSESRICEAFKWMLHFLDFKWGFLLSLSVESVQLRLLEFAEAVYNAGCPLPRCWGFIDGTVRGIARPKRWQRLFYNDHKGKHAFKFQGVVTPDGLFADLWGPVVGTRHDNYILAQSGLMQKLAM-LNSPSGQPYYLYGDPAYGLSNHLICPFSASSVGPLTPEVADFNKRISACRVTVEWGFKEICNYWAFVNMKQQQKSLLSPVAVQYRVATLLSNWHSCLNGGNEISQYFGVGPPSFEEYLGV 697          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5JJ08_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ08_9PHAE)

HSP 1 Score: 506 bits (1304), Expect = 3.990e-173
Identity = 248/375 (66.13%), Postives = 288/375 (76.80%), Query Frame = 1
Query:  517 LLQCRNMFEIATHMWFAYHMGAAY-TMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQI-----------------MLMLDLLLIPAFI-RTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584
            +L+CRN+FE+ T +WF Y++   Y  M RL +DDTPTS+ARRDVT FFSPQDC++FLRF Q Q+                 M  L+L   P  I R D     S ++  CV   R            VFGLSESCICE+FNWMLHFLDF+WG+LLSLDV RL   L+EF+EAI+NS   LTHCWGFIDGTVRGIARPK +QRM+YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRHD+++LAQSGLM+K++   NSP+GHPYCLYGDPAYGLSN+L+ PFS ++ GP TPEMADFNKRMSHCRVTVEWGFKEMTGKW  VNMKPQQKF LSP+  QYRVATLLSNWHSC+NGGN+ISQYFGV P + EEYL V
Sbjct:    1 MLRCRNLFEVYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQDCVSFLRFKQSQVIYTDIWFVYNIAFIYYAMARLELDDTPTSIARRDVTAFFSPQD--CVSFLRFT----QSQHPXVFGLSESCICEAFNWMLHFLDFRWGYLLSLDVARLQLHLIEFAEAIFNSCCRLTHCWGFIDGTVRGIARPKYWQRMFYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHDSFILAQSGLMEKLSM-LNSPTGHPYCLYGDPAYGLSNYLVCPFSASSVGPRTPEMADFNKRMSHCRVTVEWGFKEMTGKWVLVNMKPQQKFSLSPIAKQYRVATLLSNWHSCMNGGNEISQYFGVVPLTFEEYLAV 368          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5KRJ1_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ1_9PHAE)

HSP 1 Score: 501 bits (1289), Expect = 4.410e-172
Identity = 228/291 (78.35%), Postives = 259/291 (89.00%), Query Frame = 1
Query:  517 LLQCRNMFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEW 1389
            +L+CRN+FE+ T +WF Y +   Y M  L +DDTPTS+ARRDVT FFSPQDC+NFLRFTQ Q+MLMLDLLLIPAFIRTDCGFVVSGREA CV+LYRLAFPCRLKD RLVFG+SESCICE FNWMLHFLDF+WG+LLSLDV RL P L+EF+EAI+NSG PLTHCWGFIDGTVRGIARPK +QR+ YNGHKRKHAMKFQGV+TPDG+FVDLWGPV GTRH +++LAQSGLM+K++   NSP+ HPYCL GDPAYGLSNHL+ PFS ++ GPLTPEMADFNKRMSHCRVTVEW
Sbjct:    1 MLRCRNLFEVYTDIWFVYKIAFIYAMVCLELDDTPTSIARRDVTAFFSPQDCVNFLRFTQSQVMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGMSESCICEVFNWMLHFLDFRWGYLLSLDVARLQPHLIEFAEAIFNSGCPLTHCWGFIDGTVRGIARPKHWQRLLYNGHKRKHAMKFQGVITPDGLFVDLWGPVAGTRHYSFILAQSGLMEKMSV-LNSPTSHPYCLCGDPAYGLSNHLVCPFSASSVGPLTPEMADFNKRMSHCRVTVEW 290          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5L370_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L370_9PHAE)

HSP 1 Score: 497 bits (1280), Expect = 2.430e-170
Identity = 231/312 (74.04%), Postives = 265/312 (84.94%), Query Frame = 1
Query:  649 NFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSCLNGGNQISQYFGVAPPSLEEYLKV 1584
            NFFSPQDC+ F+RFT+ QI+LML+LL++PA IRT+CG VV GREA CV+LYRLAFPCRLKD RLVFGLSESCICE+FNWMLH +D K  +LLSLDV+RLVPKL  F+EA+YN G PLTHCW FIDGTVRGIARP R QR +Y+G+KRKHA+KFQGVVTPDG+  DL+   +GTRHD YLLAQS L++K+ TH NSPSGHPYCL+GDPAYG ++H+  PFS + NG L+  M +FNK MS  RVTVEWGFKEMT KWAFV MK QQKFLLSPV  QY VATLLSN+HSCLNGGNQISQYFGV PP+LEEYLKV
Sbjct:    3 NFFSPQDCVEFMRFTRDQIVLMLELLMVPAIIRTECGVVVGGREALCVLLYRLAFPCRLKDMRLVFGLSESCICETFNWMLHIMDVKLRFLLSLDVQRLVPKLRTFAEAVYNKGCPLTHCWAFIDGTVRGIARPIRNQRFFYSGYKRKHAIKFQGVVTPDGLIDDLYAAEVGTRHDGYLLAQSALLEKLQTHMNSPSGHPYCLHGDPAYGQTDHVQCPFSASVNGLLSSAMRNFNKSMSQRRVTVEWGFKEMTSKWAFVGMKCQQKFLLSPVATQYNVATLLSNFHSCLNGGNQISQYFGVEPPTLEEYLKV 314          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: D7G148_ECTSI (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G148_ECTSI)

HSP 1 Score: 451 bits (1160), Expect = 3.110e-153
Identity = 206/248 (83.06%), Postives = 225/248 (90.73%), Query Frame = 1
Query:  535 MFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYG 1278
            MFE  T +W AY+M   +TM  L  DD  T +ARRDVTNFFSPQDC+NFLR TQPQIMLMLDLLLIPAFIRTDCGFVVSGREA CV+LYRLAFPCRLKD RLVFGLSESCIC++FNWMLHFL+FKWGWLLSLDVERL P+LVEF+EAIYN+  PLTHCWGFIDGTVRGIARP RFQR YYNGHKRKHA+KFQGV+TPDG+FVD+WGPV+GTRHD+YLLAQSGLMQK+ATHFNSPSGHPYCLYGD AYG
Sbjct:    1 MFEAYTDIWMAYNMAFIHTMASLVADDVATRVARRDVTNFFSPQDCVNFLRCTQPQIMLMLDLLLIPAFIRTDCGFVVSGREALCVLLYRLAFPCRLKDMRLVFGLSESCICQTFNWMLHFLEFKWGWLLSLDVERLKPRLVEFAEAIYNADCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAIKFQGVITPDGLFVDMWGPVLGTRHDSYLLAQSGLMQKLATHFNSPSGHPYCLYGDLAYG 248          
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Match: A0A6H5K9J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J5_9PHAE)

HSP 1 Score: 435 bits (1119), Expect = 7.910e-146
Identity = 219/346 (63.29%), Postives = 239/346 (69.08%), Query Frame = 1
Query:  535 MFEIATHMWFAYHMGAAYTMTRLAMDDTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFVVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKWGWLL-----------------------------------SLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQRMYYNGHKRKHAMKFQGVVTPDGI-FVDLWGPVMGTRHDNYLLAQSGLMQKVATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRMSHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPV 1464
            M+E  T MW  Y+M   YTM  L  DD  TSLARRDVTN FSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGF+VSGREA CV+LYRLAFPCRLKD RL FGLSESCICE+FNWMLHFLDFKWGWLL                                   S+D ERL P+LVEF+EAIYN+G PLTHCWGFIDGTVRGIARP RFQR YYNGHKRKHA+ FQGVVTPDG+ +   W   +                            PYCLYGDPAYGLS+HL+ PFS  + GPLTPEM DF +RMSHCRVTVEWGFKEMT KWAFV+ + Q +  LS V
Sbjct:    1 MYEAYTDMWMVYNMAFIYTMASLITDDVATSLARRDVTNLFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGFIVSGREALCVLLYRLAFPCRLKDMRLGFGLSESCICETFNWMLHFLDFKWGWLLXXXXXXXXXXXXXXXXXXFIKXXXXXXXXXXXXXXSVDGERLKPRLVEFAEAIYNAGCPLTHCWGFIDGTVRGIARPVRFQRWYYNGHKRKHAITFQGVVTPDGLDWCKSWQHTLAA--------------------------PYCLYGDPAYGLSDHLVCPFSAASYGPLTPEMVDFIQRMSHCRVTVEWGFKEMTSKWAFVDSRSQSETSLSIV 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1006.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL85_ECTSI1.510e-22082.57DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KB08_9PHAE2.130e-21082.78DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JS57_9PHAE3.130e-20171.20DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KH29_9PHAE2.020e-19170.62DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KLS3_9PHAE8.870e-17578.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ08_9PHAE3.990e-17366.13DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KRJ1_9PHAE4.410e-17278.35DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L370_9PHAE2.430e-17074.04DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
D7G148_ECTSI3.110e-15383.06DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K9J5_9PHAE7.910e-14663.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1006contigP-littoralis_Contig1006:17218..19821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G105
PFAMsDDE_Tnp_4
Model size1965
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons3
Evalue9.38e-226
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota
DescriptionDDE superfamily endonuclease
Cds size1125
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789346.157937-UTR-P-littoralis_Contig1006:17217..176791680789346.157937-UTR-P-littoralis_Contig1006:17217..17679Pylaiella littoralis U1_48UTRP-littoralis_Contig1006 17218..17679 +
1680789346.2115328-UTR-P-littoralis_Contig1006:19443..198211680789346.2115328-UTR-P-littoralis_Contig1006:19443..19821Pylaiella littoralis U1_48UTRP-littoralis_Contig1006 19444..19821 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789346.1711562-CDS-P-littoralis_Contig1006:17679..179191680789346.1711562-CDS-P-littoralis_Contig1006:17679..17919Pylaiella littoralis U1_48CDSP-littoralis_Contig1006 17680..17919 +
1680789346.1841702-CDS-P-littoralis_Contig1006:18246..185901680789346.1841702-CDS-P-littoralis_Contig1006:18246..18590Pylaiella littoralis U1_48CDSP-littoralis_Contig1006 18247..18590 +
1680789346.1970634-CDS-P-littoralis_Contig1006:18902..194431680789346.1970634-CDS-P-littoralis_Contig1006:18902..19443Pylaiella littoralis U1_48CDSP-littoralis_Contig1006 18903..19443 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1006.5.1prot_P-littoralis_Contig1006.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1006 17680..19443 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1006.5.1

>prot_P-littoralis_Contig1006.5.1 ID=prot_P-littoralis_Contig1006.5.1|Name=mRNA_P-littoralis_Contig1006.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=375bp
MTRLHIRARNARKKRALVLLQCRNMFEIATHMWFAYHMGAAYTMTRLAMD
DTPTSLARRDVTNFFSPQDCINFLRFTQPQIMLMLDLLLIPAFIRTDCGF
VVSGREAFCVMLYRLAFPCRLKDTRLVFGLSESCICESFNWMLHFLDFKW
GWLLSLDVERLVPKLVEFSEAIYNSGSPLTHCWGFIDGTVRGIARPKRFQ
RMYYNGHKRKHAMKFQGVVTPDGIFVDLWGPVMGTRHDNYLLAQSGLMQK
VATHFNSPSGHPYCLYGDPAYGLSNHLLSPFSTTTNGPLTPEMADFNKRM
SHCRVTVEWGFKEMTGKWAFVNMKPQQKFLLSPVGIQYRVATLLSNWHSC
LNGGNQISQYFGVAPPSLEEYLKV*
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mRNA from alignment at P-littoralis_Contig1006:17218..19821+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1006.5.1 ID=mRNA_P-littoralis_Contig1006.5.1|Name=mRNA_P-littoralis_Contig1006.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2604bp|location=Sequence derived from alignment at P-littoralis_Contig1006:17218..19821+ (Pylaiella littoralis U1_48)
TTTTCTCGAGAGGGTTTCAATTGTCTGTTGACGGACCTTTCGTAGGGGAT ATTGATTTGACATCAGAAGATTCGGAAGACGTTTCGGATCGGAATGATGG ATGATTTGAAGAGTATTTGAGGTCTGGATTCATTATTAGACAGGTTCGGA CTCAAATTCCGTTTTTCGGTTTTCGGTTTTCGGATTACAGAGGAAGGTTC TGAGATTTTTTTGACATGTTGGGCCGGATGGTTGAGTCAGAGGAGGTGGC CTGTACGGTCAATGTGATTGGTTGAAGAACGGCCGCATCGGTTGCGCCGC ATTTTGTTTGCGCCGCATTGTGTTTGGAAGAAGGCTGCCTTCCTGCCTTT CTCTTGGACCTGGGACGGGCGCACAACACTAGTGTCTGCCGTCGAGGAGG CTCGGGTGTGTGCAGTGTCTCACTGGAGGAGGATAAATCCTCTCCCTTCC AATCACGCTACCATGACCCGCTTACATATTCGTGCGAGGAACGCGCGCAA AAAGCGAGCGCTAGTGTTGCTGCAGTGCCGGAATATGTTCGAGATCGCCA CACACATGTGGTTCGCCTATCACATGGGCGCCGCATACACCATGACGCGC CTGGCCATGGACGACACGCCGACGAGTTTGGCACGCAGGGATGTTACCAA CTTCTTCAGTCCTCAAGACTGCATCAATTTCCTTCGATTCACGCAGCCGC AGGTGCGTCTATGATACGAGTGTGGTTAGAAGTGTTGGCAGCCATAAATA CTGCTGCTGTCGTAGCAGAAGCGATAAGAGTACGGAAGAACTACAGCAGT ACACGACAACCGGTAGTGGTAGTACAGCAGAAGAACTACAGCAGTAGACT ACACGTCAAGCGGTAGTATACCTCGTAGAGCAGCAGTACACAGCAGTAGT ACAGCAGTATGCGCCAAGTGGTAGCAGCAGTACGGTATCGGTTCGATGAA ATCGCTGGGACTAATCTCGTGCTTGACCTGCTCCTCATGCCGGCTTCCCA TGATCGTTTTGATTTCTCGCTGTTTGCAGATTATGCTCATGCTTGACCTC CTCTTGATCCCGGCGTTCATTCGCACGGACTGTGGGTTCGTCGTAAGCGG CCGCGAGGCTTTCTGCGTGATGTTGTACCGGCTAGCGTTTCCATGCCGAC TGAAAGACACGCGTCTCGTTTTTGGTCTAAGCGAATCGTGCATCTGCGAG AGCTTCAACTGGATGCTGCACTTCCTCGACTTCAAATGGGGCTGGCTTCT CTCCCTGGATGTGGAGCGCTTGGTACCGAAACTTGTCGAGTTCTCCGAAG CCATCTACAACTCTGGTTCTCCCCTGACACACTGCTGGGGGTTCATCGAT GGCACCGTTCGTGGTATCGCAAGGTAAAGTACTTTCGGGGGTGGGTAGAC GCTGCAACCGGTGTCACACAGGGGTATTCAACACAGAGTTCTTCATATAT GCCCTCCCACTGCGGTGCTTGCTTTCTTTTCATCGCGAAACAGGGTCCAG GTAACCCTTTGCCTCTTCGATAACCTAATCGAATTCTTGAGTTAACTATT TTCCACCTTCTTCACGCATTATGTGACTGCACCCAACATTTGTACAGAAT TACTCGGTTGTTCAACCGAACCACCGAGGCGATCCCAGGACATACACTTG TATTCTGCCTCTCTTTTTTTGTTTTCATATGGCAGGCCCAAACGCTTCCA GAGGATGTACTACAACGGACATAAGAGGAAGCACGCCATGAAATTCCAAG GCGTGGTGACCCCAGATGGAATTTTCGTCGATTTGTGGGGCCCTGTAATG GGCACTCGTCACGATAACTACTTGTTAGCGCAGTCCGGACTCATGCAGAA GGTAGCCACACACTTCAACAGCCCCTCTGGGCATCCATACTGTCTTTACG GGGATCCCGCGTACGGTTTGTCTAACCATTTGCTTTCCCCCTTTAGTACA ACAACTAACGGGCCTCTGACACCCGAGATGGCCGATTTCAACAAACGAAT GAGCCACTGCAGAGTGACGGTAGAATGGGGGTTTAAAGAGATGACTGGAA AATGGGCCTTTGTGAACATGAAGCCTCAGCAGAAGTTCCTCTTGAGTCCG GTCGGGATTCAGTACAGGGTGGCTACCCTTTTGTCGAACTGGCACTCGTG TCTGAACGGGGGAAATCAGATTTCGCAGTATTTTGGTGTAGCGCCGCCTT CCCTCGAGGAGTACCTAAAGGTGTAAGGTCCTCAGGACGCCAAGGTTCAC TTGGAGGTAGATAGAGCGTGGGTCGTATGTATGTTGCCCTTGCGGTTAGC CCTGAGGATGTTCCGCAAGTATTTACTGTTGTCGGATGTAAGCACGCAGG AGTAATAGCCGAGAACCGCATTTTTCATTGTTGTTACTGTTGTTGGGACC ACGATGGTAGGATTCCCGTACCGGTCAACCACAACACAAATAATTCATCA ACGCAAACCCGCCGTATACTATGCATTTCTAACCCCGACCACAACACAAA ACTTGGACCCATGTTGAGAGACTCCGGGGAAGTACACAGCATTTAGGTAC TTGGGCGCAATGCATGCTACCTGCACTTCTTATTCGTACGAGGAATGATT ACAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1006:17218..19821+

>mRNA_P-littoralis_Contig1006.5.1 ID=mRNA_P-littoralis_Contig1006.5.1|Name=mRNA_P-littoralis_Contig1006.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1125bp|location=Sequence derived from alignment at P-littoralis_Contig1006:17218..19821+ (Pylaiella littoralis U1_48)
ATGACCCGCTTACATATTCGTGCGAGGAACGCGCGCAAAAAGCGAGCGCT
AGTGTTGCTGCAGTGCCGGAATATGTTCGAGATCGCCACACACATGTGGT
TCGCCTATCACATGGGCGCCGCATACACCATGACGCGCCTGGCCATGGAC
GACACGCCGACGAGTTTGGCACGCAGGGATGTTACCAACTTCTTCAGTCC
TCAAGACTGCATCAATTTCCTTCGATTCACGCAGCCGCAGATTATGCTCA
TGCTTGACCTCCTCTTGATCCCGGCGTTCATTCGCACGGACTGTGGGTTC
GTCGTAAGCGGCCGCGAGGCTTTCTGCGTGATGTTGTACCGGCTAGCGTT
TCCATGCCGACTGAAAGACACGCGTCTCGTTTTTGGTCTAAGCGAATCGT
GCATCTGCGAGAGCTTCAACTGGATGCTGCACTTCCTCGACTTCAAATGG
GGCTGGCTTCTCTCCCTGGATGTGGAGCGCTTGGTACCGAAACTTGTCGA
GTTCTCCGAAGCCATCTACAACTCTGGTTCTCCCCTGACACACTGCTGGG
GGTTCATCGATGGCACCGTTCGTGGTATCGCAAGGCCCAAACGCTTCCAG
AGGATGTACTACAACGGACATAAGAGGAAGCACGCCATGAAATTCCAAGG
CGTGGTGACCCCAGATGGAATTTTCGTCGATTTGTGGGGCCCTGTAATGG
GCACTCGTCACGATAACTACTTGTTAGCGCAGTCCGGACTCATGCAGAAG
GTAGCCACACACTTCAACAGCCCCTCTGGGCATCCATACTGTCTTTACGG
GGATCCCGCGTACGGTTTGTCTAACCATTTGCTTTCCCCCTTTAGTACAA
CAACTAACGGGCCTCTGACACCCGAGATGGCCGATTTCAACAAACGAATG
AGCCACTGCAGAGTGACGGTAGAATGGGGGTTTAAAGAGATGACTGGAAA
ATGGGCCTTTGTGAACATGAAGCCTCAGCAGAAGTTCCTCTTGAGTCCGG
TCGGGATTCAGTACAGGGTGGCTACCCTTTTGTCGAACTGGCACTCGTGT
CTGAACGGGGGAAATCAGATTTCGCAGTATTTTGGTGTAGCGCCGCCTTC
CCTCGAGGAGTACCTAAAGGTGTAA
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