mRNA_P-littoralis_Contig1384.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: A0A2D8LL70_9FLAO (S1/P1 Nuclease n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LL70_9FLAO) HSP 1 Score: 232 bits (592), Expect = 5.970e-73 Identity = 119/152 (78.29%), Postives = 124/152 (81.58%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
KNERGDIYQAIQKCVAVLKNKNAP ++K LK + + KG RWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQ+G
Sbjct: 95 KNERGDIYQAIQKCVAVLKNKNAPREEKVFYLKMLVHFMGDLHQPLHIGLAEDKGGNDFQVRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQKG 246
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: A0A2E2W9L2_9FLAO (S1/P1 Nuclease n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2W9L2_9FLAO) HSP 1 Score: 174 bits (441), Expect = 3.510e-50 Identity = 86/152 (56.58%), Postives = 108/152 (71.05%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
K+E+GD+Y AI CV+VLK+KNA ++K LK + + KG RWFN+GTNLHTVWDSKM+DSY+MSYTELA N L+KK++ IQQG+VKDWMYESRALCK IYATT+ G+KL YRYMY+Y++ R QLQ+G
Sbjct: 95 KSEKGDLYVAINSCVSVLKDKNATQEEKVFYLKMLIHFMGDLHQPLHVGLAEDKGGNDFQVRWFNKGTNLHTVWDSKMLDSYKMSYTELAKNTTQLSKKELKTIQQGTVKDWMYESRALCKTIYATTQVGDKLGYRYMYDYVDIARMQLQKG 246
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: A0A2G2CEL9_9FLAO (S1/P1 Nuclease n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A2G2CEL9_9FLAO) HSP 1 Score: 171 bits (433), Expect = 5.410e-49 Identity = 85/151 (56.29%), Postives = 105/151 (69.54%), Query Frame = 3
Query: 285 NERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
NE+GDI Q I+KC++VLKN N+P ++K LK + + KG RWF++GTNLHTVWDSKM+D Y MSYTELA N + LTK QV AI++GSV DWMYESRALC+ IY TE+GEKL Y YMYEYM+ +R QLQ+G
Sbjct: 95 NEKGDIIQGIEKCISVLKNNNSPKEEKIFYLKMLVHFMGDLHQPLHIGLEDDKGGNDFQVRWFSDGTNLHTVWDSKMLDFYDMSYTELAVNTDVLTKPQVEAIKKGSVLDWMYESRALCENIYGNTESGEKLGYGYMYEYMDVLRFQLQKG 245
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: A0A5C6YUN3_9FLAO (S1/P1 nuclease n=1 Tax=Aequorivita antarctica TaxID=153266 RepID=A0A5C6YUN3_9FLAO) HSP 1 Score: 167 bits (424), Expect = 1.210e-47 Identity = 84/152 (55.26%), Postives = 108/152 (71.05%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
K+E+GDI Q I++C+AVLK+ + K K LK + + KG RWFN+GTNLHTVWD KM+D Y+MSYTE+ATN + L+K+QV AI++G+V DWMYESRALC++IYA TE GEKLSY YMYEYM+T+R QLQ+G
Sbjct: 94 KSEKGDIIQGIEECIAVLKDDKSSRKDKVFHLKMLVHFLGDLHQPLHIGLAEDKGGNDFQVRWFNDGTNLHTVWDYKMLDFYEMSYTEVATNTDVLSKEQVEAIKKGNVLDWMYESRALCEDIYAHTEIGEKLSYNYMYEYMDTLRSQLQKG 245
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: A0A330MKP3_9FLAO (Uncharacterized protein n=1 Tax=Aequorivita sp. CIP111184 TaxID=2211356 RepID=A0A330MKP3_9FLAO) HSP 1 Score: 166 bits (420), Expect = 4.810e-47 Identity = 80/152 (52.63%), Postives = 108/152 (71.05%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
K+++GDI Q I KC++VLKN N+P ++K LK + KG RWF++GTNLH+VWD +M+DSY+MSYTE+A N + L+K+QV AI+ G+V DWMYESRALC++IY TE GEKLSY+YMY+YM+T+R QLQ+G
Sbjct: 94 KSDKGDIIQGINKCISVLKNTNSPKEEKLFYLKMLVHFMGDLHQPLHIGLADDKGGNDFQVRWFSDGTNLHSVWDYRMLDSYEMSYTEIAANTDVLSKEQVKAIKSGTVIDWMYESRALCEDIYEHTEIGEKLSYKYMYDYMDTLRSQLQKG 245
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: A0A1A9LIK3_9FLAO (S1/P1 Nuclease n=1 Tax=Aequorivita soesokkakensis TaxID=1385699 RepID=A0A1A9LIK3_9FLAO) HSP 1 Score: 166 bits (419), Expect = 6.800e-47 Identity = 83/152 (54.61%), Postives = 105/152 (69.08%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
K+E+GDI QAI KC++VLKN +P +K LK + KG RWF++GTNLH+VWD KMIDSY+MSYTELA N + L+K+QV AI++G+V DWMYESRALC+ IY TE GEKL Y YMY+YM+T+R QLQ+G
Sbjct: 94 KSEKGDIIQAINKCISVLKNDKSPKDEKVFYLKMLAHFMGDLHQPLHIGLADDKGGNDFQVRWFSDGTNLHSVWDYKMIDSYEMSYTELAKNTDVLSKEQVEAIKKGTVLDWMYESRALCENIYGHTEIGEKLGYNYMYDYMDTLRSQLQKG 245
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: I3YX19_AEQSU (S1/P1 Nuclease n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) TaxID=746697 RepID=I3YX19_AEQSU) HSP 1 Score: 164 bits (416), Expect = 1.910e-46 Identity = 82/152 (53.95%), Postives = 104/152 (68.42%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
K+E+GDI Q I+KC++VLKN+N+ K+ LK + + KG WF +GTNLHTVWDSKMIDSY MSYTE+A N + L+K+QV AI G+V DWMY+SRALC+ IYA TE G+KLSY YMY+YMN +R QLQ+G
Sbjct: 94 KSEKGDIIQGIEKCISVLKNENSSRDDKAFYLKMLVHFIGDLHQPLHVGLGEDKGGNDFQVLWFKDGTNLHTVWDSKMIDSYDMSYTEIAKNTDVLSKEQVEAIMSGTVLDWMYDSRALCENIYANTEIGQKLSYNYMYDYMNPLRSQLQKG 245
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: UPI001F19C800 (S1/P1 nuclease n=1 Tax=Aequorivita sp. F47161 TaxID=2874475 RepID=UPI001F19C800) HSP 1 Score: 164 bits (414), Expect = 3.810e-46 Identity = 82/152 (53.95%), Postives = 106/152 (69.74%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
K+E+GDI QAI+KC++VLK+ ++P + K LK + + KG RWF +GTNLHTVWDSKMID Y MSYTELATN + L+K+QV AI++G+V DWMYESR +C++IY TE GEKL Y YMY+YM+ VR QLQ+G
Sbjct: 94 KSEKGDIIQAIKKCISVLKDDDSPKEDKVFYLKMLVHFMGDLHQPLHIGLAEDKGGNDFQVRWFKDGTNLHTVWDSKMIDFYDMSYTELATNTDVLSKQQVEAIKKGTVIDWMYESRGICEDIYDHTEVGEKLGYNYMYKYMDVVRFQLQKG 245
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: UPI0003FE88F3 (S1/P1 nuclease n=1 Tax=Aequorivita capsosiphonis TaxID=487317 RepID=UPI0003FE88F3) HSP 1 Score: 162 bits (411), Expect = 1.100e-45 Identity = 81/152 (53.29%), Postives = 106/152 (69.74%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
K+E+GDI Q I +C+AVLKN N+ + K LK + ++ KG WF +GTNLH VWDS+M+DSY+MSYTE+A N++ LTK+QV AI+ G+ DWMYESRALC+EIY+ TE GEKLSY YMY+YM+T+R QLQ+G
Sbjct: 95 KSEKGDIIQGIDECIAVLKNDNSSKEDKVFHLKMLAHFLGDLHQPLHIGMEEDKGGNDFQVLWFKKGTNLHKVWDSQMLDSYEMSYTEVAANSDVLTKEQVKAIKSGTAVDWMYESRALCEEIYSNTEIGEKLSYNYMYDYMDTLRFQLQKG 246
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Match: A0A137REF1_9FLAO (S1/P1 Nuclease n=2 Tax=Aequorivita TaxID=153265 RepID=A0A137REF1_9FLAO) HSP 1 Score: 161 bits (407), Expect = 4.260e-45 Identity = 81/152 (53.29%), Postives = 104/152 (68.42%), Query Frame = 3
Query: 282 KNERGDIYQAIQKCVAVLKNKNAPAKKKSSILKC*FILWAICTSRCTLVWQKIKGETISIRRWFNEGTNLHTVWDSKMIDSYQMSYTELATNANPLTKKQVAAIQQGSVKDWMYESRALCKEIYATTETGEKLSYRYMYEYMNTVRGQLQRG 737
K+E+GDI Q I+KC++VLK+ N+ + K LK + + KG RWF++GTNLHTVWD KMID Y+MSYTELA N + LTK+QV I++G V DWMYESRALC++IY TE GEKL Y YMY+YM+T+R QLQ+G
Sbjct: 94 KSEKGDIIQGIEKCISVLKDANSTKEDKIFHLKMLVHFMGDLHQPLHIGLEDDKGGNDFQVRWFSDGTNLHTVWDYKMIDFYEMSYTELAANTDVLTKEQVEMIKKGGVLDWMYESRALCEDIYKNTEIGEKLGYAYMYKYMDTLRFQLQKG 245 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1384.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1384.8.1 >prot_P-littoralis_Contig1384.8.1 ID=prot_P-littoralis_Contig1384.8.1|Name=mRNA_P-littoralis_Contig1384.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp MTRIAITIFIVIFSLQTGIANEDWGKTGHRVTGEIAEKYLSRKSKKAIDAback to top mRNA from alignment at P-littoralis_Contig1384:23170..23943- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1384.8.1 ID=mRNA_P-littoralis_Contig1384.8.1|Name=mRNA_P-littoralis_Contig1384.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=774bp|location=Sequence derived from alignment at P-littoralis_Contig1384:23170..23943- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1384:23170..23943- >mRNA_P-littoralis_Contig1384.8.1 ID=mRNA_P-littoralis_Contig1384.8.1|Name=mRNA_P-littoralis_Contig1384.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig1384:23170..23943- (Pylaiella littoralis U1_48)back to top |