prot_P-littoralis_Contig1005.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1005.2.1
Unique Nameprot_P-littoralis_Contig1005.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length563
Homology
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 649 bits (1673), Expect = 5.180e-219
Identity = 325/532 (61.09%), Postives = 405/532 (76.13%), Query Frame = 0
Query:    1 MGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHV---TREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV 529
            MGDFNR+R  V++W       I+V EL  KDA+LGTR+HGSKR IDH+++ +AHP+D LR PRV+RKVDISDHYP+VSTFRSDRADA+T       D +GV +   T + G+  RI    +PMPG++WY++ G RG+ NHQ+++H+ YW PL DL+EEG  +L   D  A+ DAAA+RMV+ + QVA+    TK    +R PALK  IARAIDDRG++YR A++ R +      AW  Y E +  AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+  GLQPV+HPD+  L+T A DISA+W+THY+RLA+DVTGNSR  D+W  W AAPQR H+  LD PI   E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN  FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGV
Sbjct:  152 MGDFNRLRPRVEQWFNCAYESIRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADAST------GDSVGVPINARTIQRGE--RINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGV 675          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 209 bits (533), Expect = 2.010e-54
Identity = 183/592 (30.91%), Postives = 267/592 (45.10%), Query Frame = 0
Query:    1 MGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVS----MMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQR-----NHQRMVHSTYWTPLLDLLEEGE-GDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAA-----------------YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV 529
            +GD+N    E+ + L R   P+    +    A   T     +  IDH V     M  H   H  R RV R  D+SDH+PL+             A  P         +  +G    IE          W R G +R  R     + Q +VH  +W PL  L+++ E  DLD        D AA R+V T  +VA+   +  L++   +P    S   A    G+    + +TR   A + A +                   Y  T+  A+  VR++ R +W K +Q     +R D K  W++                 S  AG+    +       QP+KHP +  ++T   +I+ +W  ++  LA D TG+      W +  ++ P  P L  L+ P+   E+  ALL +K  KA G DG+ ADFLKL  G       D G ++      PMA  L  +L  MW  + +P  W  + VV I K +GD  +M NYRGISL+  VLK+L  II+ RL    ++  N   H  QAGFR +EEC+     L E+ +RR++ +  ++L F+DLKKAYDTVPH ALF KL+  GV
Sbjct:  301 LGDWNMREQELAKLLARWHLPLARASVCGNPATTHTPRLRPRSAIDHAVYRTDIMRTH---HQLRCRVDRSWDLSDHWPLLVRCLYHNLHQQEHAPSP---SXXXXXSYSKGTCSDIEQG--------WVRVGRMRPLRLLSEDSKQELVHHNFWNPLRALMDQEEDSDLD-------VDDAAKRLVSTIQRVAQECHI--LKDAGERPPAGKSHTSAASSTGRAAHLSHRTRSLIARKRALFLKLQRIPHGSERWERTMREYLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGV 869          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 200 bits (509), Expect = 7.900e-52
Identity = 108/297 (36.36%), Postives = 167/297 (56.23%), Query Frame = 0
Query:  233 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYG 528
            W ++EE    A++  ++DR++   K L     + ++   K  W +   +A  +R       +PV   D   L+ G  +I  +W++H+E+L+ D  G S+  + W K    P    L   D+PIT  E+  AL    + KA+G DG+P +F K+   D   ESP    +  ++  ++    +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN     + +    QAGFRK EEC+ Q  C  EI +RR L+ K T  +F+D KKAYD VPHE LFAKL  YG
Sbjct:   93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYG 385          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A1R0GS88_9FUNG (LINE-1 reverse transcriptase-like protein n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GS88_9FUNG)

HSP 1 Score: 191 bits (484), Expect = 4.410e-50
Identity = 110/296 (37.16%), Postives = 165/296 (55.74%), Query Frame = 0
Query:  235 AYEETKKTAERLVRQDRRKTWTKALQTASAQMRT-DPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV 529
            AY + K  AE+  + D +K + K L   +  + T +PK  W+F     G  + +T +G  PV      +++   + +   W+ H++ LA+D TGNSR+ D+W               DEPI   E+  AL  +  +KASG DG+P +  KL   ++   S MAK +  IL  +W    IPE    S VV +PKKG+++D NNYRGISL+ T +K+L  +++ +L+   E++ + +  Q GFR +EECV+QA  L EI +RRKL    T++ F+D  KAYD VPH AL  KL   G+
Sbjct:  201 AYVKAKNDAEKSKKLDSKKFYEKKLLKLNEYITTNEPKKMWEFIKYSTGKFKSNTSAG--PVLDIHKNLIVDSESRLKV-WENHFKNLATDTTGNSRTADKWEPMLDYDIE-SFPECDEPIKWSEITTALKEIPNNKASGTDGIPNEVWKLIKSEISPTSKMAKIVFKILKSIWDTGNIPEIMSTSIVVPVPKKGNLSDPNNYRGISLIPTFIKILAKVLANKLSAISEKYKIIAKEQGGFRTREECVSQATILYEIVKRRKLMGLETWIGFIDFSKAYDLVPHMALIYKLRNMGI 492          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A1J5WUS4_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WUS4_9MICR)

HSP 1 Score: 193 bits (491), Expect = 4.250e-49
Identity = 143/418 (34.21%), Postives = 211/418 (50.48%), Query Frame = 0
Query:  127 RKGGIRGQRNHQRMVHSTYWTPLLDLLEEG--EGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREP----------------KRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRP--HLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKL 524
            R G  +  RN+    H   W   + +  EG  E +L  + R AV  +AA R+V      ++A    +LRE                  ++ AL +   R + ++ ++ RR  K + +     A W    +  + A R   + R + W  A+  A    R D +A W+ +   AG+K K T   L+P++    G L      I   W+ HY  +  D TG+SR    W       + P   ++ LDE I+  E+ EAL  +K  KA+G DG+  + LK+AA D     PM K+++ +L   W   +I EEW+ + VV+IPKKG      NYRGISL+   LK+L  I ++RLN+  EE+ LF   QAGFR+ EEC+   A L+E AQRR  ++KAT   F+D +KAYD VPHEA+  KL
Sbjct:  157 RSGSAKVNRNYSESDH---WPMRVRVHLEGPVERELPRMSRLAVR-SAAMRIVSDPTWDSEAESAKELREKCFETAMKNQCGSSPGGGKRLALTSKTKRLLREKKEVSRRLFKEKEESDELRAQWRKLTKDVRMACRKDLRIRWENWRAAI--AEDFRRGDSRAIWRVAK--AGYKAK-TEQSLKPIRDAG-GTLQVVPEKIVEVWEAHYREMFRDKTGHSRDRSYWENKPIRERGPGERVSKLDEAISEEEVAEALSGMKNWKAAGPDGVIPEILKIAAEDC----PMRKSIVKVLQKAWDEGVIDEEWELAEVVTIPKKGKAELTENYRGISLLPVCLKLLCTIAASRLNDYMEENGLFDERQAGFRRGEECLGHVAYLVETAQRRSREKKATHACFIDFRKAYDRVPHEAMLRKL 560          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 190 bits (483), Expect = 4.910e-48
Identity = 166/542 (30.63%), Postives = 243/542 (44.83%), Query Frame = 0
Query:    2 GDFNRVRTEVDRWLRRTPYPIKVMELREKDAEL---GTREHGSKRTIDHMVSMMAHPEDHLRRPRVI---RKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRR-ARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV 529
            GD+N    ++D  LRR         +  +DA     GT   GS R IDH V+        L  P  +      D SDH+P+              A  P   G             R+   ++P P             R+           P  D   EG    +     A AD     +  TA +V     V++ R     P L+ SI  AI  R   +    ++ RG    ++ A   Y   +   + +VR +RR+   +A+  A    R     + FWK++  +A      +    QPV  P +GVL T   +I+A W  HY  L  D      R+      W       P  P L  ++ PI   EL +AL RL  +KASG DG+ A+ LKLA      +SP  K+LL ++N +W  + +P++W  S VVSI KKGDV  M+NYRGIS+M  ++K+L+ +++ RL +  + + L    Q GF   EEC  Q A + +IA RR+     T+  F+DL+KAYDT+PHE LF+KL+  G+
Sbjct:   49 GDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVF-------------ASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSIDADADGFVQAVWSTARRVGA---VSRTRRKSLGPPLQRSILGAIARRRHAFLALCQEARGPI--QSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGI 570          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A1R1XFS6_9FUNG (LINE-1 reverse transcriptase-like protein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XFS6_9FUNG)

HSP 1 Score: 179 bits (454), Expect = 1.860e-47
Identity = 105/295 (35.59%), Postives = 163/295 (55.25%), Query Frame = 0
Query:  236 YEETKKTAERLVRQDRRKTWTKALQTASAQ-MRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV 529
            Y ++K  A + ++ DR+   TK+++  + Q +  D K++W++     G   +    G    K  +   L T   +    W  H+  LA D TGNSRS D+W    ++    +    D  I   ++  AL  +  +KA G DG+P++ LKL   +    S +AK +  I+NLM+    IP+  + S VV +PKKGD+ D +NYRGISL+ T+ K++  I++T+L++   ++ +    QAGFR  EEC  QA  L EI +RRK+Q K T+L ++D  KAYD VPH AL  KL   G+
Sbjct:   63 YIKSKSNANQSIKADRKAQHTKSIKKIADQILNNDSKSYWRYIKSNTGKSFQSIADGPVYDKFKN---LTTEKCEKIKIWTNHFGDLAKDATGNSRSTDKWENLISS-DCDYYPECDSTILWSDITNALHDMTNNKAPGADGVPSEVLKLVMTEPSPTSSLAKLIHKIINLMYDTGDIPQCLETSVVVLVPKKGDLKDPDNYRGISLIPTLAKLVAKIVATKLSKIDAKYQILVKEQAGFRNFEECAGQATTLYEIVRRRKIQNKETWLCYIDYSKAYDRVPHMALLHKLRSVGI 353          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A2R5FJC4_9STRA (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FJC4_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.690e-47
Identity = 84/196 (42.86%), Postives = 130/196 (66.33%), Query Frame = 0
Query:  292 LQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAA-GDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAA 485
            +  ++ PD+G L+  A +I+ +W THY RLA+D TG+SR  D W + W  A +R  +  L++ I+  E+  A+L +K ++A G DG+PA+  +L   G   TE+P  KA+  ++N ++    +PE W  STVVSIPKKGD+ DMNNYRGISLMST LK+++ +++ R++  FE  ++++  Q GFR++EEC  Q A
Sbjct:  187 ITALRDPDSGELLLEAPEIAGAWATHYGRLAADATGHSRDDDHWAQLWPEAEEREEIEGLNDWISREEIASAILGMKNNRAPGDDGVPAELWRLLVRGAEATEAPAMKAIENVINALFFKAFVPECWCTSTVVSIPKKGDLEDMNNYRGISLMSTFLKIIMRVVARRIDRAFETQSMWAREQGGFRRREECAAQVA 382          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A498SLY1_ACAVI (Reverse transcriptase domain-containing protein n=1 Tax=Acanthocheilonema viteae TaxID=6277 RepID=A0A498SLY1_ACAVI)

HSP 1 Score: 182 bits (463), Expect = 2.670e-46
Identity = 104/303 (34.32%), Postives = 167/303 (55.12%), Query Frame = 0
Query:  235 AYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDE----PITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTE----SPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV 529
            AY++ +K    L++ +++  W   +   +   + +P+ F+++  ++ G K       L P+K  + GVL      I+  W+ HY  L  D TG+S++ + W K+       H+ S  E    P +  E+  A+  L  +KA+G DG+PA+F KL   D+ T     + + K L  I   +W    IP  W  + ++SIPKKGD+   +NYRGISL+  + K+L  ++S+R++   E + +    QAGFRK+EEC+ Q   L+E  QRRK + + T+L F+D KKAYD V HEALF K+   G+
Sbjct:  243 AYKKARKGVTNLIKTEKKNKWFNHIANGAEFRKHEPRMFFRWLKNLVGVKSYPK---LGPLKDKN-GVLQVTPEKIAEVWREHYRNLFEDSTGHSKNKEYWSKFPI-----HIRSTVELSNIPFSWSEIVLAVRSLSTNKAAGPDGIPAEFFKLINNDMDTGLAPCTKLGKFLFSIFEKVWVSGKIPNSWNLAKIISIPKKGDLTITDNYRGISLIPVISKILSKMLSSRISYHLESNGIICKEQAGFRKREECLGQVIALVEAIQRRKHKGEPTYLAFIDFKKAYDMVAHEALFLKMTGVGI 536          
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 185 bits (470), Expect = 3.360e-46
Identity = 156/534 (29.21%), Postives = 243/534 (45.51%), Query Frame = 0
Query:    1 MGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGVHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLLDLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKR--KPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGV 529
            +GDFN+        L R    ++   +R      G+R +G+   R IDH ++    P +     +VI+ VD+SDH P+V+ +                                +E   +P P     RK  +   +       S     +LD LE    DL E   + +  AA                ++ ++E K+  K  L      AI  R K+++      G   N + +   Y   K+ A    R DRR      ++ A   M T+ P+  W +    +G   +   S +          L+TG  + S +W  H+E LA D TGNSRS ++W       +  +    D  +T  E+  AL     +K+ G DG+P++  KL   +    SP AK    ++N +W+ + IP++   S +V IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL++   +H++    QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+
Sbjct:  786 IGDFNKDTESTISMLNRIGIGLRRATVRNSK---GSRMNGAVMGRMIDH-ITYSGFPNNPTYA-KVIKSVDLSDHLPVVAEWD-------------------------------MEALKIPAP----QRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAA--------------DELSCIKEEKQRFKTVLSKETLNAIQRRRKLFK------GISKNPSLS-EEYSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGI 1254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1005.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE5.180e-21961.09Reverse transcriptase domain-containing protein n=... [more]
A0A3M2C3P5_9GAMM2.010e-5430.91Reverse transcriptase domain-containing protein n=... [more]
L7JX89_TRAHO7.900e-5236.36RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R0GS88_9FUNG4.410e-5037.16LINE-1 reverse transcriptase-like protein n=1 Tax=... [more]
A0A1J5WUS4_9MICR4.250e-4934.21Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO4.910e-4830.63Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A1R1XFS6_9FUNG1.860e-4735.59LINE-1 reverse transcriptase-like protein n=1 Tax=... [more]
A0A2R5FJC4_9STRA4.690e-4742.86LINE-1 retrotransposable element ORF2 protein (Fra... [more]
A0A498SLY1_ACAVI2.670e-4634.32Reverse transcriptase domain-containing protein n=... [more]
A0A1R1YP44_9FUNG3.360e-4629.21LINE-1 retrotransposable element ORF2 protein (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 424..530
e-value: 3.5E-18
score: 65.9
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 405..562
score: 10.187553
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..86
e-value: 4.0E-5
score: 25.4
NoneNo IPR availablePANTHERPTHR19446:SF448SUBFAMILY NOT NAMEDcoord: 292..524
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 292..524
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 418..555
e-value: 8.37E-30
score: 114.696

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1005contigP-littoralis_Contig1005:2472..4266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1005.2.1mRNA_P-littoralis_Contig1005.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1005 2285..4353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1005.2.1 ID=prot_P-littoralis_Contig1005.2.1|Name=mRNA_P-littoralis_Contig1005.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=563bp
MGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVS
MMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIG
VHVTREEGQPIRIECAALPMPGSYWYRKGGIRGQRNHQRMVHSTYWTPLL
DLLEEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPA
LKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQD
RRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDT
GVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASL
DEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALL
GILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLV
MIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKA
TFLMFVDLKKAYDTVPHEALFAKLDFYGVHKGAPYHRSCSIYSLMISWTE
PRHLEYRYRETM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR036691Endo/exonu/phosph_ase_sf