mRNA_P-littoralis_Contig1004.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1004.3.1
Unique NamemRNA_P-littoralis_Contig1004.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 1.960e-117
Identity = 169/230 (73.48%), Postives = 194/230 (84.35%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHK-VGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            MSFIS+ TA ATFH F R+FAREMY EHI+LPTGDYQ KVM++Y+RLGF+GA GSTDVTH+ WG CPYNQARS+TGKEGYPT+AYQVTVDHTKR LAVTPGFTG+TNDK+IIR D AVT+IR DPIY+E+ + +Y+ADG   Q KGCYLLVDNGYHK V      +   Y I++ D  FS RLES RKDVEC+FGIVKGRFRI KL+IPYHK+EDIDNVFFTCC+LHNML
Sbjct:  178 MSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSK---YPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNML 404          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 4.730e-111
Identity = 159/229 (69.43%), Postives = 186/229 (81.22%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            MSFIS  T  +TFH FC++FA E+YDE++YLPTG+   KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR DKAVTRIRTDP+YTE+ Y LY  DG   +EKGCYLLVDNGYHK             I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCC+LHNML
Sbjct:  103 MSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPP--SKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNML 329          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 7.860e-110
Identity = 159/229 (69.43%), Postives = 186/229 (81.22%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            MSFIS  T  +TFH FC++FA E+YDE++YLPTG+   KVM +Y+R+GF GA+GSTDVTH+ WG CPYNQAR +TGKEG PT+A+QVTVDH+ R LAVT GFTGATNDKTIIR DKAVTRIRTDP+YTE+ Y LY  DG   +EKGCYLLVDNGYHK             I++GD +FS RLES+RKDVECYFGI+KGRFRINKLAI +HK+E IDNVFFTCC+LHNML
Sbjct:  194 MSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPP--SKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNML 420          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 2.580e-94
Identity = 141/232 (60.78%), Postives = 174/232 (75.00%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPT---GDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            +S++S  T Q  FH FC+HFAREMYDEHIYLP+   G+    VM +Y+RLGF+GA+GS DVTH+ W  CPYN ARS+TGKEG PT+ YQVTV+H  RA+AVT GFT +TNDKT +  D  V +IRTD  YTE+T+++Y+ DG T   KGCYLLVDNGYHK     E     Y + + D +FS RLES RKDVEC+FGI+KG FRI K+A+ YH++E IDNVFFTCC+LHNML
Sbjct:  118 VSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELD-HVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTK--YPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNML 346          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 2.050e-92
Identity = 140/231 (60.61%), Postives = 170/231 (73.59%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            +S++S PT Q  FH FC HFA EMYDEHI+LP+ +     +VM +YE+LGF GA+GSTDVTH+ W  CPYNQ RS+TGKEG PT+ YQVTV+H  R LAVT GFTG+TNDKTII  D+AV RIRTD  Y E+ + ++  DG T   KGCYL+VDNGYHK     E     Y + + D +FS RLES RKDVEC+FGI+K RFRI KLA+ Y K+E +D VFFTCC+LHNML
Sbjct:  147 LSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEP--SKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNML 375          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.000e-91
Identity = 149/259 (57.53%), Postives = 176/259 (67.95%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYT----------------------------ERTYNLYDADGATRQEKGCYLLVDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            MS++S  T Q  FH FCRHFAREMYDE I+LPT +      VM +Y+RLGFTGA+GS DVTH+AW  CPYNQARS+TGKEG+PTIAYQVTVDH  RA+AVT GFTG+TNDKTI+  D AV +I TD  YT                            E+T+++Y+ DG T   KGCYLLVDNGYHK     E     Y + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y  +E IDNVFFTC +LHNML
Sbjct:  105 MSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEP--SKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNML 361          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 4.660e-90
Identity = 137/229 (59.83%), Postives = 161/229 (70.31%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            +S +S   AQA FH FCRH A EM+DEHIYLPTG Y  +VM  + +LG TGA GSTDVTH+    CP+   RSFTGKEG+PTIAY+VTVDH  RALAVT GF G TNDKT IR D  V +IRT+  YTER Y L   +G  R  +GC+L+VDNGY++                 DT FS  LES RKDVEC+FGI+KGRFRI KL +PYHK+E IDN+FFTCC+LHNML
Sbjct:  152 LSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE--------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNML 366          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.920e-86
Identity = 137/230 (59.57%), Postives = 159/230 (69.13%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQTKVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHK-VGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            +S +S   AQ TFH FCRHFA EM+DEHIYLPTG Y  +VM  + +LG+TGA GSTDVTH+ W  CP+   RSFTGKEG+PTIAY VTVDH  R LAVT GFTGATNDKTIIR D  V +IRT   YTER Y L  A+G  R  +GC+L+VDNGYH+ V      +   Y     DT FS  LES RKDV C        FRI KL +PYHK+E +DN+FFTCC+LHNML
Sbjct:   56 LSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSK---YPQRNEDTAFSRDLESVRKDVGC--------FRILKLRMPYHKREYVDNIFFTCCILHNML 274          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 3.950e-86
Identity = 130/208 (62.50%), Postives = 158/208 (75.96%), Query Frame = 1
Query:   70 MYDEHIYLPTGDYQTK--VMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            MYDEHI+LPT +      V+ +Y+RLGFTGA+GS DVTH+AW  CPYNQARS+TGKEG+PTI YQVTVDH  RA+AVT GFTG+TNDKT +  D AV +IRTD  YTE+T+++Y+ DG T   KGCY+LVDNGYHK     E     Y + + D +FS RLES RKDVEC+FGI+KGR RI  LA+ +  +E IDNVFFTCC+LHNML
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEP--SKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNML 206          
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 3.380e-83
Identity = 135/231 (58.44%), Postives = 160/231 (69.26%), Query Frame = 1
Query:    1 MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQT--KVMSEYERLGFTGAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTPGFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLLVDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRFRINKLAIPYHKKEDIDNVFFTCCMLHNML 687
            MS++S  T Q  FH FCR FAREMYDEHI+LP  +      VM +Y+RLG                 CPYNQARS+TGK+ +PTIAYQVTVDH  RA+AVT GFTG+TNDKTI+  D AV +IRTD  YTE+T++LY+ DG T   KGCY L DNGYHK     E     Y + + D +FS RLES RKDVEC+FGI+KGRFRI KLA+ Y  +E IDNVFFTCC+LHNML
Sbjct:   40 MSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEP--SKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNML 251          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1004.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE1.960e-11773.48Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE4.730e-11169.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE7.860e-11069.43Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE2.580e-9460.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE2.050e-9260.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.000e-9157.53DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KSI7_9PHAE4.660e-9059.83DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5K796_9PHAE1.920e-8659.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI3.950e-8662.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUX7_9PHAE3.380e-8358.44DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1004contigP-littoralis_Contig1004:11960..13248 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size687
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue6.47e-87
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size687
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789345.5816903-CDS-P-littoralis_Contig1004:11959..121421680789345.5816903-CDS-P-littoralis_Contig1004:11959..12142Pylaiella littoralis U1_48CDSP-littoralis_Contig1004 11960..12142 -
1680789345.5996685-CDS-P-littoralis_Contig1004:12744..132481680789345.5996685-CDS-P-littoralis_Contig1004:12744..13248Pylaiella littoralis U1_48CDSP-littoralis_Contig1004 12745..13248 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1004.3.1prot_P-littoralis_Contig1004.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1004 11960..13248 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1004.3.1

>prot_P-littoralis_Contig1004.3.1 ID=prot_P-littoralis_Contig1004.3.1|Name=mRNA_P-littoralis_Contig1004.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bp
MSFISVPTAQATFHSFCRHFAREMYDEHIYLPTGDYQTKVMSEYERLGFT
GAIGSTDVTHLAWGCCPYNQARSFTGKEGYPTIAYQVTVDHTKRALAVTP
GFTGATNDKTIIRLDKAVTRIRTDPIYTERTYNLYDADGATRQEKGCYLL
VDNGYHKVGCCRERRFDFYAIEKGDTVFSTRLESSRKDVECYFGIVKGRF
RINKLAIPYHKKEDIDNVFFTCCMLHNML
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mRNA from alignment at P-littoralis_Contig1004:11960..13248-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1004.3.1 ID=mRNA_P-littoralis_Contig1004.3.1|Name=mRNA_P-littoralis_Contig1004.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1289bp|location=Sequence derived from alignment at P-littoralis_Contig1004:11960..13248- (Pylaiella littoralis U1_48)
ATGTCTTTCATTAGCGTGCCGACAGCTCAGGCGACCTTCCACAGCTTCTG CAGGCACTTCGCCAGAGAGATGTACGACGAACACATCTATCTACCGACAG GAGATTATCAGACGAAGGTCATGAGCGAGTACGAGCGCCTTGGCTTCACA GGCGCGATCGGGTCTACCGATGTCACCCACCTCGCGTGGGGCTGTTGCCC CTACAACCAAGCCCGTTCTTTCACAGGAAAAGAAGGGTACCCTACCATCG CATATCAAGTGACCGTGGATCACACTAAACGCGCGTTGGCAGTGACACCG GGCTTCACGGGCGCGACGAATGACAAGACGATCATCCGTTTAGACAAAGC TGTCACCCGGATCCGGACCGACCCGATCTACACCGAGCGCACGTACAACC TCTACGACGCGGACGGGGCGACACGCCAGGAGAAGGGGTGCTACTTGCTG GTGGACAATGGGTATCACAAGGTTGGTTGTTGCCGAGAGAGAAGGTTTGA TTTTGTTGTGCCACTTTATACGTTAGAAGAACAAGCTGCCTTGGCCCTTT TGTGACTGAGCCACGAAATAGATCTCTTGCAAGTCCTGTGTCTTCGATTC GCTTTTTCGCGAAAGGAAAGCTGGTACGAGACGCGTAGCTCCAAAGCATT CGTGAAGATGAACTTTTGATCTTTCACGCTCGTATGCGAGCCTGTGCCTG CATATTTCGGGCATCTTTCGGGCAGTGGTGGTAATGCCGAGCTGTGTGTA GCCTTTGTTGTTTTCGAGTGGGGATAATCTTTGTGCAAGGCGGTGTGTTG GTGTGTATGTATGTATGAATATTCAGGGTCGGGTTTGCAGAGGAACGTGC CGCCCTAGGATTAAGGTTCCGGGCCAAAGTCCGGCGCCAAACCCCTGTCA CCAACAGGTTAACTCGATAGTCTGTCCCCGCGTGCGGCGGTTAATGTGCG TTCACCATCGCCAGCATAAACGGGCGGGCGTGTTCGTGGAACGTATCCAA GACCGTATTCCATCCGCCAACAGCCTCCCAGCCCCCCCTTCTCCTCCCCT CCCCCCCCCCACCGCCGTCGTCTTGGCAGTGAAAAACTCTCATGGCCCCA ACAAAGTACGCGATAGAGAAGGGCGATACGGTGTTCTCCACTAGACTGGA GAGCTCGCGCAAGGATGTGGAGTGCTATTTTGGCATCGTGAAAGGCCGCT TCCGCATCAACAAGCTAGCGATCCCGTACCACAAGAAGGAAGACATCGAC AACGTTTTCTTCACCTGCTGCATGCTCCACAACATGCTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1004:11960..13248-

>mRNA_P-littoralis_Contig1004.3.1 ID=mRNA_P-littoralis_Contig1004.3.1|Name=mRNA_P-littoralis_Contig1004.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=687bp|location=Sequence derived from alignment at P-littoralis_Contig1004:11960..13248- (Pylaiella littoralis U1_48)
ATGTCTTTCATTAGCGTGCCGACAGCTCAGGCGACCTTCCACAGCTTCTG
CAGGCACTTCGCCAGAGAGATGTACGACGAACACATCTATCTACCGACAG
GAGATTATCAGACGAAGGTCATGAGCGAGTACGAGCGCCTTGGCTTCACA
GGCGCGATCGGGTCTACCGATGTCACCCACCTCGCGTGGGGCTGTTGCCC
CTACAACCAAGCCCGTTCTTTCACAGGAAAAGAAGGGTACCCTACCATCG
CATATCAAGTGACCGTGGATCACACTAAACGCGCGTTGGCAGTGACACCG
GGCTTCACGGGCGCGACGAATGACAAGACGATCATCCGTTTAGACAAAGC
TGTCACCCGGATCCGGACCGACCCGATCTACACCGAGCGCACGTACAACC
TCTACGACGCGGACGGGGCGACACGCCAGGAGAAGGGGTGCTACTTGCTG
GTGGACAATGGGTATCACAAGGTTGGTTGTTGCCGAGAGAGAAGGTTTGA
TTTTTACGCGATAGAGAAGGGCGATACGGTGTTCTCCACTAGACTGGAGA
GCTCGCGCAAGGATGTGGAGTGCTATTTTGGCATCGTGAAAGGCCGCTTC
CGCATCAACAAGCTAGCGATCCCGTACCACAAGAAGGAAGACATCGACAA
CGTTTTCTTCACCTGCTGCATGCTCCACAACATGCTG
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