mRNA_P-littoralis_Contig134.36.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig134.36.1
Unique NamemRNA_P-littoralis_Contig134.36.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A6H5L392_9PHAE (APH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L392_9PHAE)

HSP 1 Score: 810 bits (2091), Expect = 1.590e-276
Identity = 577/972 (59.36%), Postives = 621/972 (63.89%), Query Frame = 1
Query:  310 MAIDFPLRPLRRFLWDHLSEIIP-------------DHHRQRHPQEKSXXXXXXXXXXXGSGISSVW---AAGTGHEGFDGFRITLKKFSSGQSNPTFLLVVHLSPXXXXXXXXXXXPGAKTAAATPTLTPTPPAERATIEHDGDDAHTFRFVLRKKPASVKVSSAHAVEREFRILRALRQDASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQAEDAGPIEGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSPLAGLKGLDLEALGIPRQSALMEVYRRATAXXXXXXXXXXXXXXXXVEQALAGVDGPGVAELGLAFVFFKMAVIAHGVKARLSRGVASSAQASLVSAMVPTMIALAVEQISAL--------KHILAENIDGHEGSGGXXXXXXXXXXXXXXXXXXXXXX------------------ASPCRSPLLPPPKAVLFDVGGVLSESPLLAIARFERESRPRLPPSYVGVAISAAGEGGLFQRLERGEERLGNGFLKRFAEYLCSDEAKRAYVDWYVARWTAAGRGRGERPLSLLSSSSLSTEDTXXXXXXXXXXXXXXXXXALAVPRAATNVVHRSDCGGDDSGAATREEAKTAVARVVAVDVLELFQRITEAARVPVPEMFAAAEALRRQGFKVGVVSNDFMAERGFVLGRWRRRLREKDRSEAPAEAGAVVAAVAPDATDSSGMGGSVYSRLPALCDAVVLSSRSGCRKPGGAIYVDACEALGISTSEAVFVDDIRVNIQAAEALGMRTVWVEPGSSVTAAISGLQAVTGAKLVASKLGERGAGDWGGGVRRPASKL 3099
            MAIDFP+ PLRRFLWDHLSEI+              DH +Q+H                GSG        AAGTGHEGFDGFRI LKKFSSGQSNPTFLL VHLSP                 A            R  I+         +FVLRKKPASV VSSAHAVEREFRILRALR D  S     VPVPR LLLCEDP V+GTAFYVMEFV+GRIFSDAALPGL  AERAAAYESAAETLARLH VDF+ A LEGFGR +GGYL RQVATLERVAAKQAEDAGPIEGF  VVRDLR+L  SG+VV +RV IVHGDFRIDNLVFHP EPRVIAVLDWELSTLGHPLADLANLCILHHLPASA    XXXXXXXX                           S+  S  S TSPLAGLKGL+L+ALGIP+QS LM  YR+  +                    + GV GPGVAELGLAFVFFKMAVIAHGVKAR SRGVASS QASLVSAMVP M+ALA EQ+S L        KH L            XXXXXXXXXXXXXXXXXXXXXX                   SP   P L  P+AV FDVGGVLS+SPLLAI RFE+E+   LPPSYVGVAI+AAG+ GLFQRLERGEERLG+ FLKRF EYL SDEAKRAYV W VAR       R  RP     ++  S+   XXXXXXXXXXXXXXXXX                             A      V+AVDV ELF+RIT AARVPVPEM  AA++LRRQGF VG VSNDF+ ERGF LGR RRR    D+    A   AV A V  +A      GG VYSRLP LCD VVLSS +G RKP   IY DAC ALG+S  EAVFVDDIR NI  AEALGMRTVWV  G S+ AA+S L+AVTG KLVA            GGVRRP  KL
Sbjct:    1 MAIDFPIPPLRRFLWDHLSEIVSPDDVVGSNSSAQGDHGQQQHAWSTHGP---------GSGXXXXXXXXAAGTGHEGFDGFRIELKKFSSGQSNPTFLLEVHLSPPL---------------AXXXXXXXXXXXSRTNIKR--------KFVLRKKPASVTVSSAHAVEREFRILRALRLDPGSE----VPVPRPLLLCEDPLVIGTAFYVMEFVQGRIFSDAALPGLAPAERAAAYESAAETLARLHHVDFMRAGLEGFGRVEGGYLGRQVATLERVAAKQAEDAGPIEGFDGVVRDLRELIASGSVVQDRVAIVHGDFRIDNLVFHPAEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAAAMAXXXXXXXXGASRGAGVGGAALAGPRENRRP-----STLSSPPSATSPLAGLKGLNLKALGIPQQSELMAAYRKTASTLAAGGSGGG--------DPIRGVAGPGVAELGLAFVFFKMAVIAHGVKARQSRGVASSTQASLVSAMVPAMVALAKEQVSKLRRRRRRPPKHRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTGSP---PPLARPRAVFFDVGGVLSQSPLLAILRFEKEAL--LPPSYVGVAIAAAGQDGLFQRLERGEERLGDRFLKRFEEYLVSDEAKRAYVGWCVAR-------RRRRPTIGKDNTPSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAS-----VLAVDVRELFRRITAAARVPVPEMIDAAQSLRRQGFLVGAVSNDFLVERGFDLGRPRRR---DDKPGVHAAEAAVAATVKAEA------GGGVYSRLPDLCDVVVLSSATGSRKPSRKIYDDACRALGVSAPEAVFVDDIRENIITAEALGMRTVWVASGGSIAAALSELEAVTGVKLVAD-----------GGVRRPPGKL 886          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: D8LKT3_ECTSI (APH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT3_ECTSI)

HSP 1 Score: 783 bits (2022), Expect = 2.370e-267
Identity = 539/889 (60.63%), Postives = 578/889 (65.02%), Query Frame = 1
Query:  484 GHEGFDGFRITLKKFSSGQSNPTFLLVVHLSPXXXXXXXXXXXPGAKTAAATPTLTPTPPAERATIEHDGDDAHTFRFVLRKKPASVKVSSAHAVEREFRILRALRQDASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQAEDAGPIEGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSPLAGLKGLDLEALGIPRQSALMEVYRRATAXXXXXXXXXXXXXXXXVEQALAGVDGPGVAELGLAFVFFKMAVIAHGVKARLSRGVASSAQASLVSAMVPTMIALAVEQISALKHILAENIDGHEGSGGXXXXXXXXXXXXXXXXXXXXXXASPCRSPLLPPPKAVLFDVGGVLSESPLLAIARFERESRPRLPPSYVGVAISAAGEGGLFQRLERGEERLGNGFLKRFAEYLCSDEAKRAYVDWYVAR--WTAAGRGRGERPLSLLSSSSLSTEDTXXXXXXXXXXXXXXXXXALAVPRAATNVVHRSDCGGDDSGAATREEAKTAVARV---------VAVDVLELFQRITEAARVPVPEMFAAAEALRRQGFKVGVVSNDFMAERGFVLGRWRRRLREKDRSEAPAEAGAVVAAVAPDATDSSGMGGS------VYSRLPALCDAVVLSSRSGCRKPGGAIYVDACEALGISTSEAVFVDDIRVNIQAAEALGMRTVWVEPGSSVTAAISGLQAVTGAKLVASKLGERGAGDWGGGVRRPASKL 3099
            GHEGFDGFRI LKKFSSGQSNPTFLL VHLSPXXXXXXXXXXX                                  FVLRKKPASV VSSAHAVEREFRILRALR D +S     VPVPR LLLCEDPAV+GT FYVMEFV+GRIFSDAALPGL  AERAAAYESAAETLARLH VDFV A L GFGR +GGYL RQVATLERVAAKQAEDAGPIEGF  +VRDLR+L  SG+VV +RV IVHGDFRIDNLVFHP E RVIAVLDWELSTLGHPLADLANLCILHHLPASA     XXXXXXXXXXXXXXXXXXX               S+     STTSPLAGLKGLDL+ALGIP+QS LM  YRRA +                      GV GPGVAELGLAFVFFKMAVIAHGVKAR  RGVASSAQASLVSAMVP M+ALA EQ+S L+ +LA                      XXXXXXXXXXX        L  P+AV FDVGGVLSESPLLAI RFE+E+   LPPSYVGVAI+AAG+ GLFQRLERGEERLG+ FL+RF EYL  DEAKRAYV W VAR  W     G+ + P S  S +                        A + PRA+TNV    + GG                           VAVDV ELFQRIT AARVPVPEM  AA++LRRQGF VG VSNDF+ ERGF LGR RRR    D+    A   AV                       VYSRLP LCD VVLSS +G RKP   IY DAC ALG+S  EAVFVDDIR NI AAEALGMRTVW+  G S+ AA+S L+AVTG KL A           GGGVRRP  KL
Sbjct:    2 GHEGFDGFRIELKKFSSGQSNPTFLLEVHLSPXXXXXXXXXXX----------------------XXXXXXXXXXXXFVLRKKPASVTVSSAHAVEREFRILRALRLDPASD----VPVPRPLLLCEDPAVIGTPFYVMEFVQGRIFSDAALPGLAPAERAAAYESAAETLARLHHVDFVRAGLGGFGRGEGGYLGRQVATLERVAAKQAEDAGPIEGFDGIVRDLRELIASGSVVQDRVAIVHGDFRIDNLVFHPTESRVIAVLDWELSTLGHPLADLANLCILHHLPASAVAIASXXXXXXXXXXXXXXXXXXXRAGSTENRRP-----STLSPPPSTTSPLAGLKGLDLKALGIPQQSELMAAYRRAASTLADGGSGGGG-------DPTRGVAGPGVAELGLAFVFFKMAVIAHGVKARQFRGVASSAQASLVSAMVPAMVALAKEQVSNLRRVLAXXXXXXX---------------XXXXXXXXXXXXXXXXXXXLARPRAVFFDVGGVLSESPLLAILRFEKEAL--LPPSYVGVAIAAAGQDGLFQRLERGEERLGDRFLERFEEYLVGDEAKRAYVGWCVARRRWRRPTIGKDKTPSSSTSPAG----------------GKGGQSCASSAPRASTNVATPRERGGGXXXXXXXXXXXXXXXXXXXXXXXXXXVAVDVRELFQRITAAARVPVPEMIDAAQSLRRQGFLVGAVSNDFLVERGFALGRPRRR---DDKPGVRAAEAAVXXXXXXXXXXXXXXXXXXXXXXXVYSRLPDLCDVVVLSSATGSRKPSRKIYDDACRALGVSAPEAVFVDDIRENIVAAEALGMRTVWMASGGSIAAALSELEAVTGVKLAA-----------GGGVRRPPGKL 805          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A835Z1G4_9STRA (Phosphotransferase enzyme family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1G4_9STRA)

HSP 1 Score: 381 bits (979), Expect = 2.160e-113
Identity = 342/971 (35.22%), Postives = 426/971 (43.87%), Query Frame = 1
Query:  316 IDFPLRPLRRFLWDHLSEIIPDHHRQRHPQEKSXXXXXXXXXXXGSGISSVWAAGTGHEGFDGFRITLKKFSSGQSNPTFLLVVHLSPXXXXXXXXXXXPGAKTAAATPTLTPTPPAERATIEHDGDDAHTFRFVLRKKPASVKVSSAHAVEREFRILRALRQDASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQAEDAGPIEGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSP-----LAGLKGLDLEALGIPRQSALMEVYRRATAXXXXXXXXXXXXXXXXVEQALAGVDGPGVAELG------LAFVFFKM-----------------------------------------------------AVIAHGVKARLSRGVASSAQASLVSAMVPTMIALAVEQISALKHILAENIDGHEGSGGXXXXXXXXXXXXXXXXXXXXXXASPCRSPLLPPPKAVLFDVGGVLSESPLLAIARFERESRPRLPPSYVGVAISAAGEGG-----LFQRLERGEERLGNGFLKRFAEYLCSDEAKRAYVDWYVARWTAAGRGRGERPLSLLSSSSLSTEDTXXXXXXXXXXXXXXXXXALAVPRAATNVVHRSDCGGDDSGAATREEAKTAVARVVAVDVLELFQRITEAARVPVPEMFAAAEALRRQGFKVGVVSNDFMAERGFVL-GRWRRRLREKDRSEAPAEAGAVVAAVAPDATDSSGMGGSVYSRLPALCDAVVLSSRSGCRKPGGAIYVDACEALGISTSEAVFVDDIRVNIQAAEALGMRTVWVEPGSSVTAAISGLQAVTG 3018
            +DF +  LRR+LWD+L  I+P                       G G+S+ W +G G+EGFDGF I LKKF  GQSNPTFLL + L+P           P A  + A                           VLRKKPA   ++SAHAVEREFR LRALR  A       VPVP A +LCED  V+GT FYVME V GR F D ALPG+ RAER A Y SA   LARLH+VDF A  L  FGR+  G+  RQ+ TL RVAA QA+ AGP+ G   +   L         VP+ V ++HGD+R+DNL++H  EPRV+AVLDWELSTLGHP+ADLA+L   H +                                         P +    +A +  P     L+GL G+DL A G+P    L+  Y                     V +A     G   AEL       LAF+FFK                                                      AVIAHGV ARL+RGVASS  AS V++ VP ++ LA + ++  ++  A                       XXXXXXXXXX   CR       +A+L DVGGVL+ SPL AIAR+ERE     P  Y+G A+S A +GG      F RLERG+E L + FL+     + +   + A+     AR  + G G                            XXXXXXXX        T   H                          V   EL  RI  A+R  V EM  AAEA R +G  +G+VSNDF A  GF L G                +A   +                +Y+ L    DAVV SS  G RKP   IY  AC  L +   EAVFVDD+R N++AAEALGMR V    G+     I+ +Q   G
Sbjct:    8 VDFDVEKLRRYLWDYLVPILP----------------ADGGVASGEGVSATWLSGGGYEGFDGFSIKLKKFKGGQSNPTFLLTLSLTPPLGPGGGYLLAPRATESRAV--------------------------VLRKKPARTAIASAHAVEREFRALRALRGSA-------VPVPAAHVLCEDAQVIGTPFYVMELVAGRGFDDPALPGVARAERRAIYASAVRALARLHQVDFAAVGLADFGRAGAGFFARQLRTLTRVAAAQAQHAGPLHGLDGLAERLAGAL---KAVPDAVALMHGDYRLDNLMYHASEPRVVAVLDWELSTLGHPMADLASLVGSHFIWGPPRQP----------------------------------PAARAEGTAPSPPPPALPLLSGLAGVDLAAEGLPTADELVAQY---------------------VAEA-----GGRAAELAWHLHFYLAFMFFKASARAAVIRAAALCAARRVSLRRRRCRCCHIALRRQQPARLLLRKFTRKTQSLNAVIAHGVAARLARGVASSQHASAVASAVPRLVELAGDHLA--RYAAAA---------------------PXXXXXXXXXXXXRCR-------RALLLDVGGVLTASPLAAIARYEREIGA--PQGYIGFALSGAWDGGGGDDSPFHRLERGQEMLDDAFLELLESSVNAPPCRAAFA----ARSASKGDGGNHH----------------------GTXXXXXXXXXXXXXXXGTEHFH--------------------------VSARELMTRIAAASRAAVLEMRRAAEAARSRGVLIGIVSNDFKARAGFSLRGGXXXXXXXXXXXXXXXDAARGI---------------DIYATLHEFADAVVRSSDVGARKPEARIYELACARLRVRPVEAVFVDDLRANVRAAEALGMRGVHARVGTPARDVIAAVQDALG 767          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A7S4JTE3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JTE3_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.790e-66
Identity = 164/449 (36.53%), Postives = 221/449 (49.22%), Query Frame = 1
Query:  508 RITLKKFSSGQSNPTFLLVVHLSPXXXXXXXXXXXPGAKTAAATPTLTPTPPAERATIEHDGDDAHTFRFVLRKKPASVKVSSAHAVEREFRILRALRQD--------ASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQAEDAGPIEGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSPLAGLKGLDLEALGIPRQSALMEVYRRATAXXXXXXXXXXXXXXXXVEQALAGVDGPGVAELG----LAFVFFKMAVIAHGVKARLSRGVASSAQASLVSAMVPTMI 1818
            R+ +++F  GQSNPT+LL+V   P            G  +AAA  T       ER             R VLR+KP  V   SAHA+ RE+R+L+ LR+            +S   VPVPR +  C D  VVG+ FY+MEFV GRIF D +LPG     R  AY+ A   LA +H VD  A  L  +GR +GGY+ RQV  L  V+AKQAE  GP++G      DL   +      P+  T++HGD++IDNLVFHPVEPRVIAVLDWELST+G PL DLANL +++++P                                                      +AG+ G+DL   G+P +  L+++Y R  +                   ++ GV  P +        LAF+FFK  VI HGV  R+  GVASSA A  V++++P M+
Sbjct:   78 RMEVRQFGFGQSNPTYLLIVRGCPAVAGDSDSDG--GDDSAAAGST-------ER-------------RLVLRRKPLVVAHKSAHALHREYRVLQCLRRHNLRCRSGGRERASAGEVPVPRPVAYCSDSTVVGSEFYLMEFVSGRIFVDPSLPGTSPDHRRRAYDDAVRVLANVHAVDVDAVGLGDYGR-RGGYVSRQVRRLSAVSAKQAEVVGPVDGLDVAAADL---SAGSGGCPDESTLIHGDYKIDNLVFHPVEPRVIAVLDWELSTIGDPLCDLANLSMMYYMPTLDKGLG-----------------------------------------------IAGVGGMDLRGTGVPEREELVDMYCRWRSAVKGGSGGG----------SVGGVIDPALVHAWSGFYLAFLFFKNCVIVHGVAQRVRTGVASSAAAEKVASLLPEMV 443          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A1Y2GPD5_9FUNG (Kinase-like domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GPD5_9FUNG)

HSP 1 Score: 234 bits (598), Expect = 7.430e-65
Identity = 151/387 (39.02%), Postives = 213/387 (55.04%), Query Frame = 1
Query:  697 DAHTFRFVLRKKPASVKVSS-AHAVEREFRILRALRQDASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQA-------EDAGPIEGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSPLAGLKGLDLEALGIPRQSALMEVYRRATAXXXXXXXXXXXXXXXXVEQALAGVDGPGVAELGLAFVFFKMAVIAHGVKARLSRGVASSAQASLVSAMVPTMIALAVE 1833
            DA+  R+VLRKKPA   +SS AHAVERE+RIL+AL + +       VPVP+   LCED +++GT FYVMEF++GRIFSD  L  L   ER   + SA +TLA+LH+VD+VA  LEG+G+  G Y  RQ+A+L +V+A QA       ++ GPI G  E+    +   V  +      +IVHGD+++DNLVFHP EPRVI +LDWELST+GHP +DLANL   +++PA                                                   +P+ GLKG+  + L IP    L+E Y + T+                +E  +            +AF FF++AVI HG+KAR++RG ASSA+A + +A+V ++  LA++
Sbjct:   57 DANNTRYVLRKKPAGTLLSSTAHAVEREYRILKALGEKSD------VPVPKVYTLCEDSSIIGTPFYVMEFLQGRIFSDVTLKKLPFEERRLCWISAIDTLAKLHKVDYVAVGLEGYGKPSGFY-PRQIASLSKVSAAQAAVKDADGKEVGPIPGMEELAAWFKKYEVKDST-----SIVHGDYKMDNLVFHPTEPRVIGILDWELSTIGHPFSDLANLVNPYYVPAMDG------------------------------------------------NPIGGLKGIPEKDLPIPPVDVLLERYCQQTSRPFP------------IENWM----------FCIAFSFFRLAVILHGIKARVARGQASSAEAMVYAALVDSVAELAMD 361          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A197JXN7_9FUNG (APH-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JXN7_9FUNG)

HSP 1 Score: 224 bits (572), Expect = 2.250e-61
Identity = 151/387 (39.02%), Postives = 203/387 (52.45%), Query Frame = 1
Query:  697 DAHTFRFVLRKKPASVKVSS-AHAVEREFRILRALRQDASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQA-------EDAGPIEGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSPLAGLKGLDLEALGIPRQSALMEVYRRATAXXXXXXXXXXXXXXXXVEQALAGVDGPGVAELGLAFVFFKMAVIAHGVKARLSRGVASSAQASLVSAMVPTMIALAVE 1833
            DA   RFVLRKKPA   +SS AHAVERE+RIL+AL ++++      VPVP+   LCED +V+GT FYVMEF++GRIFSD  L  L   ER   + SA +TLA+LH+VD VA  LEG+G+  G Y  RQ+ +L +VAA QA          GPI G  E+      +    N V +  +IVHGD+++DNLVFHP EPRVI +LDWELST+GHP +DLANL   ++ PA                                                   SP+ GL G+  + L IP  + L+E Y   T+                                 +AF FF+M+VI HG+KAR++RG ASSA+A   + +  ++  LA++
Sbjct:   57 DAKGQRFVLRKKPAGALLSSTAHAVEREYRILKALGENSN------VPVPKVYTLCEDVSVIGTPFYVMEFLQGRIFSDITLSKLPFEERRLCWLSAIDTLAKLHQVDHVAVGLEGYGKPTGFY-RRQIGSLSKVAAAQAAAKDGEGNAVGPIPGMEEMA-----VWFKNNEVKDSTSIVHGDYKMDNLVFHPTEPRVIGILDWELSTIGHPYSDLANLLNPYYTPAIEG------------------------------------------------SPMGGLGGIPDKDLPIPPVNILLERYCNQTSRPFPIDNWLFC----------------------IAFSFFRMSVILHGIKARVARGQASSAEAQFYANLTDSVADLALQ 361          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A448YZL2_9STRA (APH domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZL2_9STRA)

HSP 1 Score: 222 bits (565), Expect = 6.370e-60
Identity = 150/439 (34.17%), Postives = 215/439 (48.97%), Query Frame = 1
Query:  517 LKKFSSGQSNPTFLLVVHLSPXXXXXXXXXXXPGAKTAAATPTLTPTPPAERATIEHDGDDAHTFRFVLRKKPASVKVSSAHAVEREFRILRALRQ-DASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQAEDAG-PIEGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSPLAGLKGLDLEALGIPRQSALMEVYRRATAXXXXXXXXXXXXXXXXVEQALAGVDGPGVAELGLAFVFFKMAVIAHGVKARLSRGVASSAQASLVSAMVPTMIALA 1827
            +++F  GQSNPT+LL +  S                                   + D   A  FR VLR+KP+SV   SAHA+ REF++LR L++ +   + D  VPVP     C++ +V+G  FY+MEFV GRI++D+++PG+   ER  A+ES    +A LH VD  +  L  +G+  G Y++RQ+  L+ V+ +QAE +G P      + R L +        PNR++++HGDF+IDNLVFHP EPRVIAVLDWELST+G  L DLANLC+++ +P S                                                  + ++G+ GLDL +L IP +  L+ +Y R                     Q  +G          LAFV FK AVI  GV  R   GVASSA+A+ V+  +P +  +A
Sbjct:   54 IRQFGFGQSNPTYLLQIGRS-----------------------------------DKDAPSAAPFRAVLRRKPSSVAHPSAHALHREFQVLRGLQKHNQQKTKDEHVPVPHPYAYCKEKSVIGAEFYLMEFVPGRIYTDSSMPGMTNTERKRAFESVVTVMANLHGVDVRSVGLGSYGKG-GKYVQRQLDRLKAVSRRQAELSGTPAPEIERLARQLGEFAAG---CPNRISLLHGDFKIDNLVFHPTEPRVIAVLDWELSTVGDSLCDLANLCVMYLMPQSKK------------------------------------------------AAISGVAGLDLRSLAIPTRKELLGMYSRHRIQTDRTTTISLEEV-----QKWSG--------FYLAFVTFKNAVIVQGVAQRAKAGVASSARANEVAKALPLICMMA 392          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A7S2IHH9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IHH9_9STRA)

HSP 1 Score: 208 bits (530), Expect = 3.130e-56
Identity = 140/373 (37.53%), Postives = 206/373 (55.23%), Query Frame = 1
Query:  712 RFVLRKKPASVKVSSAHAVEREFRILRALRQDASSSSDAP---VPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQAEDAGPI-EGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSPLAGLKGLDLEALGIPRQSALMEVYRRATAXXXXXXXXXXXXXXXXVEQALAGVDGPGVAELGLAFVFFKMAVIAHGVKARLSRGVASSAQASLVSAMVPTMI 1818
            + VLRKKP  V   +AHA+ RE+ IL++L    + S   P   VPVP     C D  ++ + FY+ME+V+GRIF +  +PGL   +R AAY  A +TLA +H V++    L  FG+ +GGY+ RQ+  L  V+ KQ++  GP+ EGF E+ + L+D   + +  P+ V+++HGD++IDNL+FHP EP+VIAVLDWELST+G P+ D+ANL +++ +P                                       LP             +AG+ GLDLE  GIP +  L+  Y             XXXXXXXX+  +L+  +    +   L+F+FFK  VI HGV  R   GVASSA A+ V++++P ++
Sbjct:    6 KLVLRKKPNKVAHKTAHALHREYAILQSLHHKHNPSVPHPSQQVPVPIPYAYCTDTTILDSEFYIMEYVQGRIFIEPQMPGLTPQQRTAAYADAIQTLANIHSVNWKQCGLANFGK-EGGYVSRQIKRLLAVSDKQSDIIGPVGEGFEELAQKLKD---AASYCPDCVSLLHGDYKIDNLIFHPTEPKVIAVLDWELSTIGDPMCDIANLSMMYVMPK--------------------------------------LPKGMG---------IAGINGLDLEKHGIPSRLDLITTY----CQIIHNIQQXXXXXXXXITTSLSPPNAIKWSGFYLSFLFFKNCVIVHGVAQRAKVGVASSAIANKVASLLPLLV 323          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A4D9CXK6_9STRA (APH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXK6_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.360e-55
Identity = 129/293 (44.03%), Postives = 169/293 (57.68%), Query Frame = 1
Query:  712 RFVLRKKPASVKVSSAHAVEREFRILRALRQDASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRA-ERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQAEDAGPIEGFGEVVRDLRDLTVS-GNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSSTYSSASTTSPLAGLKGLDLEALGIPRQSALMEVY 1584
            + VLRKKPA VKV+SAHAVEREFR+L AL+       ++ VPVP    LCED +V+GT FY+M FV+GRIF D  LP ++ + ERA  Y +   TLA +H +D+    L  FG+  GGY  RQ+  L  V  KQAE+AG   G  EV  D+   +   G  + ++  +VHGDF++DN+VFHP EPRVIAVLDWELSTLGHP+ADLANL ++  +PA                                      +P +          P++GL GLDLEALGIP +  L++ Y
Sbjct:   61 QLVLRKKPALVKVASAHAVEREFRVLEALQ-------NSDVPVPPVYHLCEDASVLGTPFYLMGFVEGRIFRDPTLPCIKTSQERAQYYRAMVATLAAIHTLDWRKRSLSTFGKPDGGYFARQLKRLRSVMEKQAENAGYFPGLQEVCSDMLLYSEQPGFKMRDQTCLVHGDFKVDNVVFHPTEPRVIAVLDWELSTLGHPMADLANLAMMFFVPA--------------------------------------VPRA----------PISGLLGLDLEALGIPDEDELVKAY 298          
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Match: A0A0E9NLL2_SAICN (APH domain-containing protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NLL2_SAICN)

HSP 1 Score: 203 bits (517), Expect = 5.520e-54
Identity = 121/291 (41.58%), Postives = 164/291 (56.36%), Query Frame = 1
Query:  511 ITLKKFSSGQSNPTFLLVVHLSPXXXXXXXXXXXPGAKTAAATPTLTPTPPAERATIEHDGDDAHTFRFVLRKKPASVKVS-SAHAVEREFRILRALRQDASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFVKGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKGGYLERQVATLERVAAKQA----EDAG----PIEGFGEVVRDLRDLTVSGNVVPNRVTIVHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPAS 1356
            I +K+F+ GQSNPT++L                                             DA   R+VLRKKP    +S +AHAVERE+++LRA++       D PVPVP+   LCED ++VGT FY+M+F+KGRIF++  LP L   E+   + +A +TLARLH VD  +  L  +G+  GG+  RQ+ TL  ++A Q     ED+G    PI  F E ++   +     N+  +R  I HGDF++DNLVFHP EPRVI +LDWELST+GHPL+DLANLC    LP S
Sbjct:   38 IDVKQFTHGQSNPTYVLT--------------------------------------------DAANERYVLRKKPPGQLLSKTAHAVEREYKVLRAIQ-------DTPVPVPKVYCLCEDESIVGTPFYIMQFLKGRIFTNPRLPDLSAEEQCLCWRAAIQTLARLHAVDAKSVGLSSYGKF-GGFYTRQIKTLSTISAAQGAVKDEDSGKAVGPIPYFEECMKWFAE-----NMPKDRAGITHGDFKMDNLVFHPTEPRVIGILDWELSTIGHPLSDLANLCQPFSLPKS 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig134.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L392_9PHAE1.590e-27659.36APH domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LKT3_ECTSI2.370e-26760.63APH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z1G4_9STRA2.160e-11335.22Phosphotransferase enzyme family-domain-containing... [more]
A0A7S4JTE3_9STRA1.790e-6636.53Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1Y2GPD5_9FUNG7.430e-6539.02Kinase-like domain-containing protein n=1 Tax=Lobo... [more]
A0A197JXN7_9FUNG2.250e-6139.02APH-domain-containing protein n=1 Tax=Linnemannia ... [more]
A0A448YZL2_9STRA6.370e-6034.17APH domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A7S2IHH9_9STRA3.130e-5637.53Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A4D9CXK6_9STRA1.360e-5544.03APH domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A0E9NLL2_SAICN5.520e-5441.58APH domain-containing protein n=1 Tax=Saitoella co... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig134contigP-littoralis_Contig134:245351..249861 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKT3
PFAMsAPH
Model size3546
Max annot lvl2759|Eukaryota
KEGG koko:K11729
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.49e-271
EggNOG OGsCOG3173@1|root,2QQPX@2759|Eukaryota
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-11_005440.1
DescriptionPhosphotransferase enzyme family
Cds size2793
COG categoryS
BRITEko00000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789616.225677-UTR-P-littoralis_Contig134:245350..2457941680789616.225677-UTR-P-littoralis_Contig134:245350..245794Pylaiella littoralis U1_48UTRP-littoralis_Contig134 245351..245794 -
1680789616.2689114-UTR-P-littoralis_Contig134:249552..2498611680789616.2689114-UTR-P-littoralis_Contig134:249552..249861Pylaiella littoralis U1_48UTRP-littoralis_Contig134 249553..249861 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789616.2364163-CDS-P-littoralis_Contig134:245794..2462211680789616.2364163-CDS-P-littoralis_Contig134:245794..246221Pylaiella littoralis U1_48CDSP-littoralis_Contig134 245795..246221 -
1680789616.2457395-CDS-P-littoralis_Contig134:246314..2478791680789616.2457395-CDS-P-littoralis_Contig134:246314..247879Pylaiella littoralis U1_48CDSP-littoralis_Contig134 246315..247879 -
1680789616.2580307-CDS-P-littoralis_Contig134:248751..2495521680789616.2580307-CDS-P-littoralis_Contig134:248751..249552Pylaiella littoralis U1_48CDSP-littoralis_Contig134 248752..249552 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig134.36.1prot_P-littoralis_Contig134.36.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig134 245795..249552 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig134.36.1

>prot_P-littoralis_Contig134.36.1 ID=prot_P-littoralis_Contig134.36.1|Name=mRNA_P-littoralis_Contig134.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=931bp
MAIDFPLRPLRRFLWDHLSEIIPDHHRQRHPQEKSSSGGGGSGSSSGSGI
SSVWAAGTGHEGFDGFRITLKKFSSGQSNPTFLLVVHLSPPPAAAAAAAS
SPGAKTAAATPTLTPTPPAERATIEHDGDDAHTFRFVLRKKPASVKVSSA
HAVEREFRILRALRQDASSSSDAPVPVPRALLLCEDPAVVGTAFYVMEFV
KGRIFSDAALPGLRRAERAAAYESAAETLARLHRVDFVAADLEGFGRSKG
GYLERQVATLERVAAKQAEDAGPIEGFGEVVRDLRDLTVSGNVVPNRVTI
VHGDFRIDNLVFHPVEPRVIAVLDWELSTLGHPLADLANLCILHHLPASA
AASASARGGSEEEATAAGGEAAAAAAASAARMREKKLPTSSTYSSASTTS
PLAGLKGLDLEALGIPRQSALMEVYRRATAAAAAAAAAPGGEGGGGVEQA
LAGVDGPGVAELGLAFVFFKMAVIAHGVKARLSRGVASSAQASLVSAMVP
TMIALAVEQISALKHILAENIDGHEGSGGGGGGSSGGSGGSGSGSGSGSG
KASPCRSPLLPPPKAVLFDVGGVLSESPLLAIARFERESRPRLPPSYVGV
AISAAGEGGLFQRLERGEERLGNGFLKRFAEYLCSDEAKRAYVDWYVARW
TAAGRGRGERPLSLLSSSSLSTEDTASQHSSRRTTTTSSARAALAVPRAA
TNVVHRSDCGGDDSGAATREEAKTAVARVVAVDVLELFQRITEAARVPVP
EMFAAAEALRRQGFKVGVVSNDFMAERGFVLGRWRRRLREKDRSEAPAEA
GAVVAAVAPDATDSSGMGGSVYSRLPALCDAVVLSSRSGCRKPGGAIYVD
ACEALGISTSEAVFVDDIRVNIQAAEALGMRTVWVEPGSSVTAAISGLQA
VTGAKLVASKLGERGAGDWGGGVRRPASKL*
back to top

mRNA from alignment at P-littoralis_Contig134:245351..249861-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig134.36.1 ID=mRNA_P-littoralis_Contig134.36.1|Name=mRNA_P-littoralis_Contig134.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4511bp|location=Sequence derived from alignment at P-littoralis_Contig134:245351..249861- (Pylaiella littoralis U1_48)
ACCACCTCTGTGTGCACTCACGCGCACGCGCGTACATCTTCTGCGCGCTA CATAGGCTAATAAGCTACTTAGAAGTAGAGTGCCTTGCACGTGTGGTCAT CGATACCAATAGGAGAGAGTTCAACTTTCGACAGGAGGAAGGCTCGCTTC AACTGCAACTAACCTCTTGTGCTGCTGTGCATAATATTTTTGAGAGAGAT CCCCCACGTTCAAGCGCTCGCACGGCACACAGGGGTAGCCGGCCGAAGAC GCAAAGACCCGTCACCACCACCACCGCTGCCCTCGCCACCACTTCCACTC CTTGCCACTATGGCAATCGACTTTCCGCTCCGTCCTTTGCGTCGATTTTT GTGGGACCACCTTTCCGAAATTATCCCCGATCACCACCGACAACGACACC CCCAGGAGAAATCCTCCTCCGGCGGTGGCGGCAGCGGCAGTAGCAGCGGC AGCGGGATTAGCAGCGTCTGGGCAGCCGGCACGGGACACGAAGGATTTGA TGGTTTCCGCATCACGCTCAAGAAGTTCTCAAGCGGGCAATCCAATCCCA CCTTCTTACTCGTGGTTCACCTGTCGCCTCCTCCGGCAGCAGCAGCGGCA GCAGCTTCTTCTCCGGGAGCTAAAACAGCGGCAGCAACACCAACACTCAC ACCAACCCCGCCAGCAGAAAGGGCCACCATCGAGCACGACGGCGATGATG CACACACGTTCCGGTTTGTCCTCCGCAAGAAACCGGCGAGCGTCAAGGTC TCCTCCGCGCACGCGGTCGAGCGCGAGTTCCGCATCCTCCGCGCGCTACG CCAAGACGCTTCGTCGTCATCGGACGCCCCCGTTCCCGTCCCGCGCGCCC TTCTCCTCTGCGAGGACCCCGCGGTCGTCGGCACCGCGTTCTACGTCATG GAGTTCGTGAAAGGTCGCATCTTCTCCGATGCGGCCCTCCCCGGCCTGAG GCGGGCGGAGCGAGCGGCGGCGTACGAGAGCGCCGCGGAGACGCTGGCGA GGCTGCATCGCGTAGATTTCGTGGCGGCTGACCTGGAAGGGTTCGGAAGG AGCAAGGGCGGGTACTTGGAGCGGCAGGTGGCGACGCTCGAAAGAGTGGC TGCGAAGCAGGTGCGCGTGGGTGTGTGTATTTGGTTTCATCCATGTGCTC GGTCGGGTTGGTGTGGTGTGACGTAGTGCGGCTGTTGCAGCGGCACGTGA CCACATGGGACAGTTCTAGTAGAGTCGTCTCGTGGTGCGCCGCATCGAGT GCTTTCAGGTATGATGCATCTTTCATATGCCCACACGAACTGAAAAGGCA ACCAACAACGGTGATATTGGCGGCAGGGTCGTCTTTCCGGGCGGAGTTAG AATCGAGCAGGCTGCGTAATGGCGAACACCTTTCTTTGGTACCATGTAAA TAGGTATGATATCATATGATTTCATTATCATACTTGGGTCTGTCCTTGTA GTTTCTCTACAAGTACACGGGGTGCGTTTGGGCTGAGTTTAGGTGATCCC GCGGCTGCTGCTGTGTGCAAGCAAGGTTCTGTACCTTTGTGGTGACACAT ATCGTACGTAGGTGCCTAGTTCTGGTTGCATGTTCCTGTCGGCCGTTCAA TAACTGCTGTTCGAAGCACACGAGCGAGAGGAGATCGGGAGCCAACAAAG TTTCGAAAATTACGCATGAAGAGTGAATTTGGTGCTGCCACACATGCGCG GTGCACGTGCAGCTTTTCCACCACGGGTGTTTGCATTTTCTCGGGCTTCC GCTCTGTTGTTGTTAAGTGGCTTTAATGTGCGACGTACATCAAGGATAAC GCCCGAAATCAACGCATTTTGGTTGATTTCGCGCTGCTTGTTTTGTGGCG TGAAATGATGTGAGGTTCATTTCTACATGGACAACATTCGGAATCAAAAC CCTTTTTTAATGTCGCTTCTTGGTTCGCTACTATTTTATTCGAATTCTTC ATACGACATGACACTACACAAAACAAACACAGGCGGAAGACGCAGGACCG ATCGAAGGGTTCGGCGAGGTCGTCCGGGACCTGCGCGACCTCACGGTCTC CGGCAACGTCGTGCCCAACCGCGTCACCATTGTCCACGGCGACTTCCGCA TCGACAACCTCGTCTTCCACCCTGTCGAGCCCCGCGTCATCGCCGTCCTG GACTGGGAGCTGTCCACGCTGGGCCACCCCCTCGCCGACCTCGCTAATCT CTGCATCTTACACCACCTTCCGGCTTCAGCAGCAGCGTCAGCGTCAGCTC GAGGAGGCTCAGAGGAAGAAGCAACGGCGGCAGGTGGCGAGGCTGCCGCC GCCGCCGCCGCTTCAGCCGCACGGATGAGAGAGAAAAAACTGCCAACTTC ATCTACTTATTCGTCGGCGTCCACTACATCTCCGCTCGCGGGATTGAAAG GCCTGGATCTCGAAGCGCTCGGTATACCGCGGCAGTCGGCGCTCATGGAG GTTTACCGGCGAGCTACTGCCGCCGCCGCTGCTGCTGCTGCTGCTCCCGG CGGCGAGGGTGGCGGTGGTGTCGAGCAGGCGCTAGCGGGTGTTGATGGAC CGGGCGTTGCAGAGCTCGGGCTCGCTTTTGTGTTTTTTAAAATGGCCGTG ATCGCGCACGGGGTGAAAGCCCGCCTTTCCCGAGGCGTTGCTAGCTCTGC CCAGGCCTCTCTGGTGTCGGCCATGGTACCGACGATGATAGCGCTGGCGG TAGAACAGATCTCGGCCCTCAAACACATTTTGGCAGAAAACATAGATGGC CATGAAGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCAGCGGCGG CAGCGGCAGCGGCAGCGGCAGCGGCAGCGGAAAGGCAAGCCCGTGCCGAA GCCCACTGTTGCCGCCACCAAAAGCGGTGCTGTTCGACGTCGGTGGGGTG CTTTCAGAATCTCCCCTGCTGGCGATCGCGAGATTTGAGAGGGAATCCCG GCCGCGACTGCCCCCTTCGTACGTGGGCGTCGCCATTTCCGCCGCGGGTG AAGGAGGCCTCTTCCAGAGGCTGGAGAGGGGAGAAGAACGGCTCGGGAAC GGTTTCTTGAAACGCTTCGCGGAGTACCTTTGCAGCGACGAAGCGAAGCG AGCATACGTGGATTGGTACGTTGCCCGGTGGACGGCGGCAGGTAGAGGAC GGGGAGAGAGGCCGTTGTCGTTGCTGTCGTCGTCGTCGCTGTCAACCGAA GATACGGCGAGCCAGCACAGCAGTCGTCGAACAACAACCACAAGCTCTGC ACGCGCTGCGCTCGCTGTACCGCGGGCGGCGACAAACGTGGTTCATCGGA GCGATTGTGGAGGGGATGACAGCGGCGCAGCAACACGAGAAGAAGCGAAA ACGGCGGTAGCAAGGGTTGTGGCCGTCGACGTGCTGGAGCTCTTCCAGCG TATCACGGAGGCCGCGCGAGTGCCAGTTCCGGAGATGTTCGCTGCGGCAG AGGCGCTGCGGCGGCAGGGCTTCAAGGTCGGCGTGGTGTCCAACGATTTC ATGGCCGAGCGGGGGTTCGTTTTGGGGAGGTGGCGGCGGCGACTGAGGTC GGCGGGGGGAGGCGAAGGCGAAACCGAGCACCAAGACAAGTCGGCGGCGG CAGGTAATAGCGGCTTGCTGCCGGGTTTGAAGATGTCGAGGGAAAAAGAC AGATCAGAAGCGCCAGCAGAAGCAGGGGCCGTAGTAGCAGCAGTAGCCCC GGACGCAACCGACAGCAGCGGCATGGGCGGTAGCGTGTACTCCCGCCTTC CCGCCCTGTGCGATGCCGTTGTGCTCTCCTCGAGGAGCGGGTGCCGCAAG CCCGGCGGCGCGATCTATGTAGACGCCTGCGAAGCGCTCGGGATTTCCAC GTCTGAAGCGGTTTTTGTGGATGACATTCGGGTCAACATTCAAGCCGCCG AAGCGCTGGGCATGCGAACGGTGTGGGTTGAACCGGGGAGCTCCGTCACC GCTGCCATCTCGGGATTGCAAGCAGTAACCGGGGCCAAGTTGGTGGCATC GAAACTCGGGGAACGGGGGGCGGGGGATTGGGGTGGTGGTGTTCGCCGAC CCGCTAGCAAGCTTTGATGCTGGTTCAGCTTTGGAGCTGCTTTGTTCAGT TTTTGGTTTCGACCTCGGGTGGGCGCTTTTAACCCTTGTTCCACTGGTCG CATTGTTCGCTTCTCGTGATACGGTTTGATAAATATACTTCGAAATGCTT GTTGCTGTCTGCAAGATACGATATATAGTACCAAGGTATCTGGCTGTGGT ATTATTATTCTTGCTTGCTTTGGTAGCTGTTTTATCTGTTGATCGATGTG GCATCACGGCACCATAAACGAGGTAGTCGAAGGATTCGGGATATCGACGT CGTCTGCAGTCTATGATGAGGACGGCCGTTGTTTCCCCAAAGGTGACGTC ACTGCCCTGGATGACGTCACTGCTTAACCATGAGCTTTCCACCGATCAGA AACTAATAATTTCTGAGATTATCCTTTCAAAATCTTGATCAATCAGAAAA CCACGGCCCCA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig134:245351..249861-

>mRNA_P-littoralis_Contig134.36.1 ID=mRNA_P-littoralis_Contig134.36.1|Name=mRNA_P-littoralis_Contig134.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2793bp|location=Sequence derived from alignment at P-littoralis_Contig134:245351..249861- (Pylaiella littoralis U1_48)
ATGGCAATCGACTTTCCGCTCCGTCCTTTGCGTCGATTTTTGTGGGACCA
CCTTTCCGAAATTATCCCCGATCACCACCGACAACGACACCCCCAGGAGA
AATCCTCCTCCGGCGGTGGCGGCAGCGGCAGTAGCAGCGGCAGCGGGATT
AGCAGCGTCTGGGCAGCCGGCACGGGACACGAAGGATTTGATGGTTTCCG
CATCACGCTCAAGAAGTTCTCAAGCGGGCAATCCAATCCCACCTTCTTAC
TCGTGGTTCACCTGTCGCCTCCTCCGGCAGCAGCAGCGGCAGCAGCTTCT
TCTCCGGGAGCTAAAACAGCGGCAGCAACACCAACACTCACACCAACCCC
GCCAGCAGAAAGGGCCACCATCGAGCACGACGGCGATGATGCACACACGT
TCCGGTTTGTCCTCCGCAAGAAACCGGCGAGCGTCAAGGTCTCCTCCGCG
CACGCGGTCGAGCGCGAGTTCCGCATCCTCCGCGCGCTACGCCAAGACGC
TTCGTCGTCATCGGACGCCCCCGTTCCCGTCCCGCGCGCCCTTCTCCTCT
GCGAGGACCCCGCGGTCGTCGGCACCGCGTTCTACGTCATGGAGTTCGTG
AAAGGTCGCATCTTCTCCGATGCGGCCCTCCCCGGCCTGAGGCGGGCGGA
GCGAGCGGCGGCGTACGAGAGCGCCGCGGAGACGCTGGCGAGGCTGCATC
GCGTAGATTTCGTGGCGGCTGACCTGGAAGGGTTCGGAAGGAGCAAGGGC
GGGTACTTGGAGCGGCAGGTGGCGACGCTCGAAAGAGTGGCTGCGAAGCA
GGCGGAAGACGCAGGACCGATCGAAGGGTTCGGCGAGGTCGTCCGGGACC
TGCGCGACCTCACGGTCTCCGGCAACGTCGTGCCCAACCGCGTCACCATT
GTCCACGGCGACTTCCGCATCGACAACCTCGTCTTCCACCCTGTCGAGCC
CCGCGTCATCGCCGTCCTGGACTGGGAGCTGTCCACGCTGGGCCACCCCC
TCGCCGACCTCGCTAATCTCTGCATCTTACACCACCTTCCGGCTTCAGCA
GCAGCGTCAGCGTCAGCTCGAGGAGGCTCAGAGGAAGAAGCAACGGCGGC
AGGTGGCGAGGCTGCCGCCGCCGCCGCCGCTTCAGCCGCACGGATGAGAG
AGAAAAAACTGCCAACTTCATCTACTTATTCGTCGGCGTCCACTACATCT
CCGCTCGCGGGATTGAAAGGCCTGGATCTCGAAGCGCTCGGTATACCGCG
GCAGTCGGCGCTCATGGAGGTTTACCGGCGAGCTACTGCCGCCGCCGCTG
CTGCTGCTGCTGCTCCCGGCGGCGAGGGTGGCGGTGGTGTCGAGCAGGCG
CTAGCGGGTGTTGATGGACCGGGCGTTGCAGAGCTCGGGCTCGCTTTTGT
GTTTTTTAAAATGGCCGTGATCGCGCACGGGGTGAAAGCCCGCCTTTCCC
GAGGCGTTGCTAGCTCTGCCCAGGCCTCTCTGGTGTCGGCCATGGTACCG
ACGATGATAGCGCTGGCGGTAGAACAGATCTCGGCCCTCAAACACATTTT
GGCAGAAAACATAGATGGCCATGAAGGCAGCGGCGGCGGCGGCGGCGGCA
GCAGCGGCGGCAGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCGGA
AAGGCAAGCCCGTGCCGAAGCCCACTGTTGCCGCCACCAAAAGCGGTGCT
GTTCGACGTCGGTGGGGTGCTTTCAGAATCTCCCCTGCTGGCGATCGCGA
GATTTGAGAGGGAATCCCGGCCGCGACTGCCCCCTTCGTACGTGGGCGTC
GCCATTTCCGCCGCGGGTGAAGGAGGCCTCTTCCAGAGGCTGGAGAGGGG
AGAAGAACGGCTCGGGAACGGTTTCTTGAAACGCTTCGCGGAGTACCTTT
GCAGCGACGAAGCGAAGCGAGCATACGTGGATTGGTACGTTGCCCGGTGG
ACGGCGGCAGGTAGAGGACGGGGAGAGAGGCCGTTGTCGTTGCTGTCGTC
GTCGTCGCTGTCAACCGAAGATACGGCGAGCCAGCACAGCAGTCGTCGAA
CAACAACCACAAGCTCTGCACGCGCTGCGCTCGCTGTACCGCGGGCGGCG
ACAAACGTGGTTCATCGGAGCGATTGTGGAGGGGATGACAGCGGCGCAGC
AACACGAGAAGAAGCGAAAACGGCGGTAGCAAGGGTTGTGGCCGTCGACG
TGCTGGAGCTCTTCCAGCGTATCACGGAGGCCGCGCGAGTGCCAGTTCCG
GAGATGTTCGCTGCGGCAGAGGCGCTGCGGCGGCAGGGCTTCAAGGTCGG
CGTGGTGTCCAACGATTTCATGGCCGAGCGGGGGTTCGTTTTGGGGAGGT
GGCGGCGGCGACTGAGGGAAAAAGACAGATCAGAAGCGCCAGCAGAAGCA
GGGGCCGTAGTAGCAGCAGTAGCCCCGGACGCAACCGACAGCAGCGGCAT
GGGCGGTAGCGTGTACTCCCGCCTTCCCGCCCTGTGCGATGCCGTTGTGC
TCTCCTCGAGGAGCGGGTGCCGCAAGCCCGGCGGCGCGATCTATGTAGAC
GCCTGCGAAGCGCTCGGGATTTCCACGTCTGAAGCGGTTTTTGTGGATGA
CATTCGGGTCAACATTCAAGCCGCCGAAGCGCTGGGCATGCGAACGGTGT
GGGTTGAACCGGGGAGCTCCGTCACCGCTGCCATCTCGGGATTGCAAGCA
GTAACCGGGGCCAAGTTGGTGGCATCGAAACTCGGGGAACGGGGGGCGGG
GGATTGGGGTGGTGGTGTTCGCCGACCCGCTAGCAAGCTTTGA
back to top