mRNA_P-littoralis_Contig1001.6.6 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: D8LGP1_ECTSI (MutS protein homolog 1B MutS-like ATPases involved in mismatch repair, family 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP1_ECTSI) HSP 1 Score: 1462 bits (3785), Expect = 0.000e+0 Identity = 799/937 (85.27%), Postives = 838/937 (89.43%), Query Frame = 3
Query: 435 MSPARASTASLLEPSMANDVKATAAAGGATKNDAVGGDVDLFARTWESLDFGVVLERLSGECRTEMGRVRALVPDFKTTLEEVHELYERVNEVLRLAGDAVPLRAGMAVERQLAIAAEGSTLEPSEIAAVASALEGLFELRQFFCGVKADAKTAGGMVDRSGETPRLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLADEGRDAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLLQGKTPVGNDMSLDTSMQVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPAAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEARSEPTTNVIGSSIGKIRALKTEVEKEAAAPTYTAEDLGLTPLKKRDKLAKGEKVVVCDGSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSRIPHGGVKWPAQSPSGGSLSKKKRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQDDVGSFSSGDSDTNKRRKKG-SADNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHGTGVLKSGIRRWLPRNSMVAKWRPASQGDGGDAYTVVELK 3242
MSP A+T +LL P MA+D +A AA A AVGGDVDLFARTWESLDFGVVLERLS ECRTEMGR RAL+PDFKTTLEEVHELYERVNEVL LAGDAVPLRAGMAVE QLAIAA GSTLEP+EIAAVASALEGLFELR+FFCG ADAK+ GGMVDRSG+TPRLAAVAAEI LDEGLLGLLRGAFDS+GELSAQRFPEIGRLR KADSLRQGIKSTM RLMAGGEFSGMLADEGR+AYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVE KLQLKVETQRILSQMTLKIAEHEDEIL SLAAAAEVDLALARGRLGAKT GTIPKV+NEGTIKLVNARHPVLLL+GK PVGN MSLD SMQ LILTGPNAG K TVVLKTLGLVALMARAGIPIPAAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGA+AGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAA+D+RFGVSAMQFVDGRPTYRLIKGAVGES AL VAERLELPAFV+ERA+ LLDDNTRQVSELI KLE ERN+LQDQL+RAA+RE E++QQL+KLAEEREEAAELRSMAKRDAAKEYA KLDANEKKLKQMF++ARSEPTT+VIGSSIG+IRALK EV+KEAA PTYTA+DLGLTPLKKRD++AKGEKVVVCDGSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSR+P GGVKWPAQSPSGGSL+KK RYPGG+V G GGA A PR+K GTSRRVAQYL+DDVGSFSSGD S DNYFMRTERNTLDLRGMTLSEAQ DCD+FFS IMD DGVYLLHGHGTGVLK+GIRRWLPRNSMVAKWRPASQ DGGDAYTVVELK
Sbjct: 1 MSPIGAAT-TLLRPPMADDREAAGAA--AKGKPAVGGDVDLFARTWESLDFGVVLERLSRECRTEMGRSRALIPDFKTTLEEVHELYERVNEVLLLAGDAVPLRAGMAVEPQLAIAAAGSTLEPTEIAAVASALEGLFELREFFCGAVADAKSPGGMVDRSGKTPRLAAVAAEIKLDEGLLGLLRGAFDSQGELSAQRFPEIGRLRSKADSLRQGIKSTMSRLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEVKLQLKVETQRILSQMTLKIAEHEDEILQSLAAAAEVDLALARGRLGAKTGGTIPKVMNEGTIKLVNARHPVLLLRGKAPVGNSMSLDASMQALILTGPNAGGK--------------------TVVLKTLGLVALMARAGIPIPAAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGARAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAATDERFGVSAMQFVDGRPTYRLIKGAVGESFALQ---VAERLELPAFVVERARGLLDDNTRQVSELISKLEDERNQLQDQLDRAAKRETEVLQQLKKLAEEREEAAELRSMAKRDAAKEYAVKLDANEKKLKQMFDKARSEPTTDVIGSSIGEIRALKKEVQKEAAVPTYTAQDLGLTPLKKRDRVAKGEKVVVCDGSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSRLPPGGVKWPAQSPSGGSLAKK-RYPGGIV-------GPSGGAAAADTPRRKTGTSRRVAQYLEDDVGSFSSGDGXXXXXXXXXRSGDNYFMRTERNTLDLRGMTLSEAQGDCDMFFSNGIMDGSDGVYLLHGHGTGVLKAGIRRWLPRNSMVAKWRPASQEDGGDAYTVVELK 903
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: A0A6H5JAB7_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAB7_9PHAE) HSP 1 Score: 1009 bits (2608), Expect = 0.000e+0 Identity = 604/823 (73.39%), Postives = 641/823 (77.89%), Query Frame = 3
Query: 36 MAVQQLLVCAAALWPVAAYAFAAPGFLLSPAAGRTAAGVGGAIGRPLPRRRGAAAALRSVTLSAASGRDDNRLKTARGSGEGDRRKGSLRCQASGRGGGEKGGDNRSAQKAAITTTSPSATINPPVASAREAPMSPARASTASLLEPSMANDVKATAAAGGATKNDAVGGDVDLFARTWESLDFGVVLERLSGECRTEMGRVRALVPDFKTTLEEVHELYERVNEVLRLAGDAVPLRAGMAVERQLAIAAEGSTLEPSEIAAVASALEGLFELRQFFCGVKADAKTAGGMVDRSGETPRLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLADEGRDAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLLQGKTPVGNDMSLDTSMQVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPAAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQM-FEEARSEPTTNVIGSSIGKIRALKT 2501
MA + LL AL PV AY F P + PAAGR AGVGG + RGAA S + S R + G G R GSLRCQ +S+REAPMSP A+T +LL P MA D +A AA AT AVGGDVDLFARTWESLDFGVVLERLS ECRTEMGR RAL+PDFKTTLEEVHELYERVNEVL LAGDAVPLRAGMAVE QLAIAA GSTLE +EIAAVASALEGLFELR+FFCG ADAK AGGMVDRSG+TPRLAAVAAEI LDEGLLGLLRGAFDS+GELSAQRFPEIGRLR KADSLRQGIKSTM RLMAGGEFSGMLADEGR+AYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVE IAEHEDEIL SLAAAAEVDLALARGRLGAKT GTIPKV+NEGTIKLVNARHPVLLL+GK PVGNDMSLD SMQ LILTGPNAG K TVVLKTLGLVALMARAGIPIPAA GARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGA+AGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAA+D+RFGVSAMQFVDGRPTYRLIKGAV AERLELPAFV+ERA+SLLDDNTRQVSELI KLE+ERN+LQDQL+RAA+RE E++QQL+KLAEEREEAAELRSMAKRDAAKEYA KLDANEKKLKQ+ F+ RS+ + +S + AL+T
Sbjct: 1 MAARLLLSLCTALMPVEAYTFVPPRASMPPAAGRRTAGVGGDGCVGIRPSRGAALPS-SAFIGHGSCRCGTHTASRSSVGTGTRGGGSLRCQX---------------XXXXXXXXXXXXXXXXTASSSREAPMSPMGAAT-TLLRPPMAEDREAAGAA--ATGKPAVGGDVDLFARTWESLDFGVVLERLSRECRTEMGRSRALIPDFKTTLEEVHELYERVNEVLLLAGDAVPLRAGMAVEPQLAIAAAGSTLEATEIAAVASALEGLFELREFFCGAMADAKGAGGMVDRSGKTPRLAAVAAEIKLDEGLLGLLRGAFDSQGELSAQRFPEIGRLRSKADSLRQGIKSTMTRLMAGGEFSGMLADEGREAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVE-------------------IAEHEDEILQSLAAAAEVDLALARGRLGAKTGGTIPKVMNEGTIKLVNARHPVLLLRGKAPVGNDMSLDASMQALILTGPNAGGK--------------------TVVLKTLGLVALMARAGIPIPAAQGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGARAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAATDERFGVSAMQFVDGRPTYRLIKGAV-----------AERLELPAFVVERARSLLDDNTRQVSELISKLEEERNQLQDQLDRAAKRETEVLQQLKKLAEEREEAAELRSMAKRDAAKEYAVKLDANEKKLKQVWFQAPRSKKSDGTGTTSTHFVLALRT 754
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: A0A835YZI9_9STRA (Muts protein-like protein 1B muts-like ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZI9_9STRA) HSP 1 Score: 766 bits (1978), Expect = 3.380e-256 Identity = 477/946 (50.42%), Postives = 594/946 (62.79%), Query Frame = 3
Query: 549 VDLFARTWESLDFGVVLERLSGECRTEMGRVRALVPDFKTTLEEVHELYERVNEVLRLAGDAVPLRAGMAVERQLAIAAEGSTLEPSEIAAVASALEGLFELRQFFCGVKADAKTAGGMVDRSG----ETPRLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLADEGRDAYVSEIAGRFVIPVTPTYKRT--------------VGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLLQGKTPVGNDMSLDTSMQVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPAAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEARSEPTTNVIGSSIGKIRALKTEVEKEAAAPTYT----------------AEDLGLTPLKKRDKLAKGEKVVVCD-GSSIGWEGEVLSTSNR---DVEVFLPSAEASMRFAFSQLSRIPHGGVKWPAQSPS------GGSLSKKKRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQDDVGSF-----SSGDSDTNKRRKKGSADNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHGTGVLKSGIRRWLPRNSMVAKWRPASQGDGGDAYTVVEL 3239
VDLFARTWESLDFGVVLE LS EC T MGR AL DFK +E V LY V EV L + VP+ +GM +E +A+AA+G+TLEP E+ V+ L L L++FF + DA G V TP L + I LD L+ LL AFD+ GEL ++FPE+GRLR + D L I+ ++ +L++ G FSGMLADEGR AYVSE+ GRFV+PV PTYKR VGIVHD SRTGKTL++EP+ VV PTNELVE KL LK E RILS+MT+K+ +++ +L SL+AAAEVDLA AR RLGA+ GTIP+V +EG I+L RHPVL L+GK PV ND+ LD + Q L+LTGPNAG K TVVLKTLGLVALMARAGIP+PAA GARVD+FDPVLADIGDLQSVTGDLSTFSGHL+V KAVL A+ G+LVLMDEMGSGTDP QG ALAQ+LLEAL+D+G+RVALTTHY QLKELAA D RF V+AMQFV+GRPTYRL+ GA+GES AL+ VAERL+LPA V+ERAKSLLD+ TRQVS+LI +LEQER L+ + A++ + + L E + E ++ A EYA +L+A E KLK++FE+ + +P+ ++IGSSIG +RA+K E+EA T +DLGLTPL +L+ EKVVVC G G EG V+ + DV V A++++ +LS P G + S S G A + R GTSRRVAQY++ ++ S S G G ++RT NTLDLRG +L E++ CD FF+ IM+ ++LHGHGT VLK G+R WLP+ MV + RPA DGGDAYTVVEL
Sbjct: 29 VDLFARTWESLDFGVVLEHLSKECWTAMGRKAALKADFKADVESVQALYRGVEEVYSLT-EPVPIASGMDIEAIIALAAKGTTLEPPELREVSDCLTSLSNLKRFFNPEEGDAPVRGVTVSGGAGARYPTPTLQGLTRPIYLDPELVELLHEAFDATGELCGKKFPELGRLRARIDKLYDSIRQSVQKLLSSGTFSGMLADEGRGAYVSEVNGRFVLPVKPTYKRNGTCAAFCEAYDKRNVGIVHDVSRTGKTLFIEPSSVVEPTNELVELKLALKAEEARILSRMTIKVGQNQRPLLASLSAAAEVDLACARARLGARLGGTIPEVGSEGAIRLRAVRHPVLALRGKDPVPNDLELDAASQALVLTGPNAGGK--------------------TVVLKTLGLVALMARAGIPVPAARGARVDVFDPVLADIGDLQSVTGDLSTFSGHLMVCKAVLERARPGALVLMDEMGSGTDPAQGVALAQALLEALLDSGARVALTTHYLQLKELAAGDARFKVAAMQFVEGRPTYRLMAGAIGESFALA---VAERLQLPAPVLERAKSLLDEGTRQVSDLIRELEQERENLRLREVEMNDVRAQLKAREDALEEAKREVERKKADAXXXXXXEYAIELEAREAKLKEVFEKLKEDPSLSIIGSSIGSLRAIKAVAEEEARGETXXXXXXXXXXAEVYIREKVDDLGLTPLTPDHELSLNEKVVVCARGIMYGREGTVVRVHKKSGVDVNV---GGRATIKYQLHELSLPPTAGFRRRCTSNSTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGIKAQAGGRGSGGTSRRVAQYMEQEIASSGGRKGSRGYVSITPSVPVGPQAKAYVRTPANTLDLRGKSLEESKLLCDQFFNRCIMNGNGVAFVLHGHGTEVLKKGLRAWLPKAPMVKRARPADSSDGGDAYTVVEL 947
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: A0A4D9D3J8_9STRA (Smr domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3J8_9STRA) HSP 1 Score: 535 bits (1379), Expect = 1.060e-167 Identity = 363/920 (39.46%), Postives = 508/920 (55.22%), Query Frame = 3
Query: 552 DLFARTWESLDFGVVLERLSGECRTEMGRVRALVPDFKTTLEEVHELYERVNEVLRLAGDAVPLRAGMAVERQLAIAAEGSTLEPSEIAAVASALEGLFELRQFFCGVKADAKTAGGMVDRSGETPRLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLADEGRDAYVSEIAGRFVIPVTPTYKRT-VGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTI-PKVLNEGTIKLVNARHPVLLLQGKTPVGNDMSLDTSMQVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPAAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQ-----------------LEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEARSEPTTNVIGSSIGKIRALKTEVEKEAAAPTYTAEDLGLTPLKKRDKLAKGEKVVVCDGSSIGWE--GEVLSTSNRDVEVFLPSAEASMRFAFSQ--LSRIPHGGVKWPAQSPSGGSLSKKKRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQDDVGSFSSGDSDTNKRRKKGSADNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHGTGVLKSGIRRWLPRNSMVAKWRPASQGDGGDAYTVVELK 3242
+L RTW S+D VV +RL+G C T + A P +EEV Y+ V E+ + A D +PL M + +A AA G+ LE ++ ++A AL L LR F V+A R +L+ A +I+L L+ LL AFD +G LS +FP++ RLR + D L IK+T+ +LM S M+ DE Y+++ GRFV+P+ TYKR +GIVHD S TG+T+YVEP QV+ PTN++ +L+L E RI+ +MT +A +D+IL SL A A +D+++AR +LG G + P+V +G I +ARHPVLLL+ + P+GN + +D + L+LTGPNAG K T+VLKTLGL+AL+ R GIP+PA G RVD F P+LADIGD+QSVTGDLSTFSGHL+V + VLS A +G+LVLMDEMGSGTDP QG A+AQ+LLEAL++ G+RVA+TTHY QLKELA DDRF V AM+F++G+PTYR +GA+GES AL VAERLELPA V+ RAK L+ +V+ELI +LE +R+ LQ ++E A L+K+ + AK + A + A+L EKKL+ M ++ T + ++ ++ A+K +V +E+ P L LK+ D L +GE VVVC G + + G+V+ S ++V+V + F + L+R P P G K R +K R + L +V S+ + T MRT NT+D+RG+ L +A+ D F I VY+LHGHGTG LK G+R ++ R+ V++ R A DGGDA+T V LK
Sbjct: 108 NLHERTWASMDLHVVQDRLAGLCDTVRAKELARSPCLAENVEEVRRRYKAVEEIWQSA-DVIPLNDPMDIAPAVAFAARGNVLELPDLRSIAKALIILATLRDF---VQAPV--------RKERLSQLSQFAEDIDLPFELVDLLSDAFDQDGRLSGVKFPQLKRLRDEVDRLYGSIKNTVGQLMKSTGMSQMVTDE----YIAQRNGRFVLPIKNTYKRAGLGIVHDQSNTGQTVYVEPVQVIEPTNDMKRLELELLQEEARIVGEMTRLVAVSKDQILRSLDAGALIDISVARAKLGDLMGGAVVPEVGTDGCISAEDARHPVLLLRNRNPIGNTLHIDPAKPGLVLTGPNAGGK--------------------TIVLKTLGLLALLVRLGIPVPARRGVRVDFFSPILADIGDMQSVTGDLSTFSGHLLVCREVLSNAASGALVLMDEMGSGTDPAQGVAIAQALLEALLETGARVAITTHYLQLKELAQKDDRFTVGAMEFLNGKPTYRFREGAIGESYALE---VAERLELPASVLARAKGLMGGGALRVTELIKELEDQRDALQGEMEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXLDKM----------KYRAKLETADAFLAQLQEKEKKLEAMMKDVGLGDTKTSVEEALKELAAVKAKVAEESK-PEVVHVPANLVLLKRDDILKEGE-VVVCAGDQLNSDRAGKVVKASGQNVDVMFSKGGLDIVITFKKTDLARAPSETAARVNAGPYAGLAKNKDRK------------------------KKWTKADERNLKLLGQEVRHASTPAAITLNA----------MRTSFNTIDVRGLRLRDAEAKVDNFIKVGIPQKRKVVYILHGHGTGQLKEGLREFMKRHPYVSRHRAADDSDGGDAFTQVFLK 942
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: A0A7S1BBM6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BBM6_9STRA) HSP 1 Score: 504 bits (1297), Expect = 1.300e-156 Identity = 345/799 (43.18%), Postives = 471/799 (58.95%), Query Frame = 3
Query: 927 PRLAAVAAEINLDEGLLGLLRGAFDSE--GELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLA--DEGRDAYVSEIAGRFVIPVTPTYKRTVG-IVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLLQGKTP--VGNDMSLDTSMQV-LILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPAAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEARSEPTTNVIGSSIGKIRALKTEV-----EKEAAAPTYTAEDLGLTPLKKRD--KLAKGEKVVVC-DGSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSRIPHGGVKWPAQSPSGGSLS----KKKRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQDDVGSFSSGDSDTNKRRKKGSA-----DNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHG-TGVLKSGIRRWLPRNSM-VAKWRPASQGDGGDAYTVVELK 3242
P L + + + E L LL AFD + G+L +RFP + LR K SLR+ + + L+ FS ML+ G A SE+ GRFV+P++PT+K VG IVHD SRTG+TLYVEP ++VGPTN+ A+ +L+ E +R+L +T I + + + S+AAAA++DL LAR RLG AG++P+V EG ++ ARHPVL L+ V N + + T+ + L+LTGPN+G K TVVLK LGL+ALMAR G+P+PA PGARVD FD VLADIGD+QSV GDLSTFSGH++V + VL + SLVLMDEMGSGTDP QG A+AQ+LLE L++AG+RVA+TTH+ +LK+LAASD RF V+ MQFVDGRPTYRL GAVGES AL+ VA+RLELP V+ER++ LLDD TRQ+ +L+ LE ++ + Q A +E E+VQ L E R E R+ +R+ AK+++ K++ E L+ + E+ + +P ++ S +R +K EV EK+ + P D+ LTPL K D K+ G+ +V+C DGS G EG+VLS ++DVE+ L + SMR +++ + A + G+ S KKK KK SRRVA+ ++D + R+ G A MRTE NT+DLRG ++ EA C FS + M+ VYLL GHG TG LK G+RRWL V ++ A Q DGGDA+T VEL+
Sbjct: 144 PLLEDLVEPLYIPEELTELLTTAFDKDDPGQLCGKRFPTLKTLRDKISSLRRSVLQQLQSLLKTPSFSSMLSLPPGGAAAGYSEVDGRFVVPLSPTFKNRVGGIVHDVSRTGRTLYVEPPELVGPTNDARRAEAELRAEERRLLRVLTQAIVKGREHLSRSVAAAAQLDLVLARVRLGDVLAGSVPEVGEEGVLRAPGARHPVLSLRTDAVQVVPNHLDVGTNGRAGLVLTGPNSGGK--------------------TVVLKLLGLLALMARDGVPVPAEPGARVDFFD-VLADIGDMQSVDGDLSTFSGHMLVCREVLRRSGRRSLVLMDEMGSGTDPKQGVAIAQALLEELLEAGARVAVTTHFLELKQLAASDHRFAVAGMQFVDGRPTYRLQPGAVGESFALA---VAKRLELPPRVLERSRELLDDETRQIGDLLQDLEGQKEAAERQTRLLAAQEEELVQMRAGLEEARRELEAKRAAVRREEAKKFSLKMEEREDALRDILEKLKEDPRQRLVARSWDDLRLIKEEVLESVREKDPSQPR----DMVLTPLTKPDLAKVKVGDTLVICRDGSMRGQEGKVLSKGSKDVELSLGAM--SMRLKLREVAFPTQVYADYAAARQTTGARSLRDIKKK---------------------------KKSAVSRRVAE------------EADAVETRQPGRAAPAPQTGGEMRTESNTVDLRGKSVQEAASACLDAFSMAKMNGRRVVYLLTGHGPTGALKEGVRRWLGNERQKVKRYSGADQEDGGDAFTKVELR 873
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: K0RMS7_THAOC (Smr domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RMS7_THAOC) HSP 1 Score: 490 bits (1261), Expect = 4.090e-148 Identity = 349/981 (35.58%), Postives = 520/981 (53.01%), Query Frame = 3
Query: 546 DVDLFARTWESLDFGVVLERLSGECRTEMGR---VRAL------------------VPDFKTTLEEVHELYERVNEVLRLAGDAVP------------------------------LRAG--------MAVERQLAIAAEGSTLEPSEIAAVASALEGLFELRQFFCGVKADAKTAGGMVDRSGETP-------RLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLADEGRDAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLLQGKTPVGNDMSLDTSM-QVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPAAPG--ARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEAR-SEPTTNVIGSSIGKIRALKTEVEKEAAAPTYTAEDLG-----------LTPLKKRDKLAKGEKVVVCDGSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSRIPHGGVKWPAQSPSGGSLSKKKRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQDDVGSFSSGDSDTNKRRKKGSADNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHGTGVLKSGIRRWLPRNSMVAK-WRPASQGDGGDAYTVVELK 3242
++D+ RT ++LD+ V+ L+ EC T+ R +++ +P +++E VH Y V E+ RL G + L G + +E ++I EG LE EI V+S +E ++ + ++ + G + E +L ++ +I++DE L+ LL AFD EG+LS FP IGRLR K +L++GI S+++ ++A LA E + +SEI GR VIPV Y +VGIVHD+SR+GKT YVEP++VV PTNEL A+ +L+ E ++ Q+T I +H +EI ++A+ ++D+ AR +LG + GT+P+V NEG + ++A+HP+LLL+G VG+D+ + Q +ILTGPNAG K T++LK LGL A+MAR GIP+P ARVD F+PVLADIGD+QSV DLSTFSGH++V + VL+ A+ +LVL+DE GSGTDP QG A+AQ+LLEAL+D G RVA+TTH+ LK+LA+SDDRF V+ MQF+ RPTY+LI G +GES AL+ VAERL+LPA V++RA LLD TR++ EL+ LE+++ E++ E ++E E+++ ++ ++E+ + A+RD A ++ KL+ EK L+ + E + S T VI S ++R +K EV EA + L ++ LK +K+ G+ VVVC + + + + +E L +R + +++ P G Q+P VA D G SS D+ + R KG++ M+T+ NT+D G+ E++ C FS + M + VY+LHGHGTGVLK IR WL K ++PA Q DGGDA T VELK
Sbjct: 267 NIDMHQRTLDTLDYPVIQRALADECETQFARNLITKSMNTQVQSRDIQDTDADVLTMPITASSVEGVHSRYGAVQEMQRLMGGRITGFWSTARRNALKHKISSSSRGISNKKKVQRLSLGTPPIDGYTLDIESIMSIIDEGKVLEGPEILDVSSMMELCLDVLDWSDALEEWNRDNVGGEESEFEFELQQEPFVQLPSLVKQIHMDEELIELLATAFDEEGKLSGTTFPSIGRLRSKIRTLKRGILSSIESILALPSMRNKLAVESGGSLMSEINGRIVIPVQQQYS-SVGIVHDASRSGKTSYVEPSEVVQPTNELRSAESELRAEEAKVWRQLTESIVKHREEIERNVASLGQLDVVKARVKLGRRLDGTVPEVKNEGVVSAIDAKHPILLLRGMEVVGSDVEIGQGKNQAMILTGPNAGGK--------------------TIILKLLGLFAMMARDGIPVPTKQSEKARVDFFEPVLADIGDIQSVDADLSTFSGHMLVCREVLNDARKDALVLLDEPGSGTDPNQGVAIAQALLEALLDRGCRVAITTHFLDLKQLASSDDRFAVAGMQFLGNRPTYKLIPGMIGESFALA---VAERLKLPASVLDRANGLLDSETRKMGELLRDLEEQKQEVEKTSEALKKKEFEMLELKAEMRSQQEKLEAKQLNARRDEAARFSKKLEEKEKILEGILERLQGSGATKKVIADSWTELRIVKREVMSEAENVPGSIRQLNQLDEANVELIPISELKGINKVEVGKSVVVCKKGAFYGKDATVKKLGKKLE--LSVGGMPVRLSLKEIAFPPSSGR---GQTP--------------------------------------------VANL---DEGGSSSVDASSGSTRDKGTS----MKTKSNTVDCLGLNFEESKRKCINSFSKAAMGNRSVVYILHGHGTGVLKRKIREWLKNERQFVKSFKPADQADGGDALTRVELK 1167
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: B7G4P6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4P6_PHATC) HSP 1 Score: 479 bits (1233), Expect = 5.520e-145 Identity = 363/998 (36.37%), Postives = 515/998 (51.60%), Query Frame = 3
Query: 546 DVDLFARTWESLDFGVVLERLSGECRTEMGRV------------------------------RALVPDFKTTLEEVHELYERVNE---VLR----------------------LAGDAVPLRAGMAVERQ--LAIAAEGSTLEPSEIAAVASALEGLFELRQFFCGVKADAKTAGGMVDRSGETPRLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLADEGRDAYVSEI-AGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLL-QGKTPVGNDMSLDTS-MQVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPA-----APGA----------------RVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEARSEPTTNVIGSSIGKIRALKTEVEKEA------------AAPTYTAEDLGLTP---LKKRDKLAKGEKVVVC-DGSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSRIPHGGVKWPAQSPSGGSLSKKKRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQDDVGSFSSGDSDTNKRRKKGSADNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHGTG-VLKSGIRRWLPRN-SMVAKWRPASQGDGGDAYTVVELK 3242
D+DLF R+ ++LD+ VL+ L +C T R+ RA P T+ E Y V E +L+ LAG PL G A + LA+A +G LE EI V+ L+ + ++R + D + + E L +A+ I ++ L LL AFD + LS FP +GRLR + SL+ I T+D L+A LA E SE+ GR V+PV Y +VGIVHD+SR+GKT+YVEPT++VGPTNEL +A+ +L+ E R+ +T +I +++ + S+ A ++DL +AR LG K +GTIP V +EG I+L NA+HPVLLL Q K VG+D+ L Q L+LTGPN+G K TV+LK LGL+ALM+R GIP+PA A GA R+D F+PVLADIGD+QSV GDLSTFSGH++V + VL+ + +LVLMDE+GSGTDP QG A+AQ+LLEA+++ G+RVA+TTHY QLK+LAASDDRF V+ MQFV GRPTY+L+ G VGES AL+ VAERL LP VI+RA++L+D TRQ+ +LI +LE ++ + Q+ + + +R+ A+++A KL+ E+ L+ + E+ +++PT V+ S I+ +K + EA A AE L P L++R +L +G+KV+VC G G E ++ + VEV + + ++ L PA + G LS + A + L T R SS SDT + MRT NT+D+RG L EA+D FS S++ VY+LHGHGTG VLKS +R+WLP+ ++V ++ A DGGDA+T V+L+
Sbjct: 146 DLDLFQRSLDTLDYPRVLQALEEQCTTVPARLMVRQASHDLTTNGTSTIQSKKSKRIPKGSERAFQPLTADTVLGTQERYRAVQELEWILQGGSGQINLADYSYRNRKSYKETLAGKPPPL-GGNAFDLLAILAVAEQGKVLEGEEIFDVSQMLDRMQDVRLW----SDDGLLNVNRLQQDIEFVELPKLASCIQVNTTLQDLLHNAFDKDDRLSGTTFPVLGRLRARVRSLKADIMGTLDSLLALPSIKNKLALESGGPIYSEVNGGRLVLPVAQKYASSVGIVHDTSRSGKTVYVEPTELVGPTNELRQAEGELRAEEARVWRSLTEQILKNQIVLETSVRAIGQLDLVMARLLLGRKLSGTIPVVQDEGVIQLRNAKHPVLLLRQVKNVVGSDVDLGADGNQGLVLTGPNSGGK--------------------TVILKLLGLMALMSRGGIPVPADRPRVAVGAKSYGDEYDSNNDEFQPRIDFFNPVLADIGDIQSVGGDLSTFSGHMLVCREVLANSGRNALVLMDELGSGTDPAQGVAIAQALLEAILETGARVAITTHYMQLKQLAASDDRFSVAGMQFVQGRPTYKLLPGTVGESFALA---VAERLNLPQSVIDRAEALMDSETRQLGDLIRELEDQKGLVDQQVLEXXXXXXXXXXXXXXXXXXXXXXXKKQLTVRREEARKFAKKLEEKEQVLENVLEKLKADPTRRVLAKSWDDIKFVKRDALNEAENIPSIVARKKKANAVLAAEQGELIPIAELRERPELKEGDKVIVCKQGPVFGREATIVKSLGSRVEVLVNNMNVGLKLTQVALPTASFRSTSGPANTWGDGRLSIGR------------------------AAERALATERCAGPSTS------SSSSSDTVAVSAPSKSRGVTMRTTSNTVDVRGCNLEEAKDRIRSAFSASLLAGRSVVYVLHGHGTGGVLKSKLRQWLPKEKTLVDSFQGADAADGGDAFTRVQLR 1085
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: A0A448ZMM4_9STRA (Smr domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMM4_9STRA) HSP 1 Score: 471 bits (1211), Expect = 2.120e-141 Identity = 346/916 (37.77%), Postives = 512/916 (55.90%), Query Frame = 3
Query: 627 EMGRVRALVPDFKTTLEEVHELYERVNEVLRLAGDAVPLRA-GMAVERQLAIAAE-GSTLEPSEIAAVASALEGLFELRQFFCGVK--ADAKTAGGMVDRSGETPRLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLADEGRDAYVSEIA-------GRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLLQG-KTPVGNDMSLDTS-MQVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPAAPG-------ARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGS-LVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEARSEPTTNVIGSSIGKIRALKTEV-------------EKEAAAPTYTA--EDLGLTPLKKRDKLAKGEKVVVCD-GSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSRIPHGGVKWPAQSPSGGSLSKK--KRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQDDVGSFSSGDSDTNKRR---KKGSADNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHGTG-VLKSGIRRWLPRNS-MVAKWRPASQGDGGDAYTVVELK 3242
EM R+ KT L + + R +V G+ PL +E L I +E G+ LE EI +++ + + +++ + ++ D + G E PR + I L+ L LL AFD +G LS + FP +G+LR + +L+ I T+D ++ LA E SE+A GR V+P+ P Y +GIVHDSSR+GKT+YVEP+++VGPTNEL + + +L+ E R+ +T ++ ++ ++ S+ A A++DL +AR RLG + G IP V +EG I L +A+HPVLLL+ + VG+D+SL Q L+LTGPN+G K TV+LK LGL+ALM+R+GIPIPAA G RVD F+PVLADIGD+QSV DLSTFSGH++V + VL+ A+ G+ LVLMDE+GSGTDP QG A+AQ+LLEAL++ G RVA+TTHY QLK+LA+SDDRF V+ MQFV RPTY+L+ G VGES AL+ VAERL+LP V++RA LLD TRQ+ +LI LE ++ + +Q+ R+ EI Q K+ E + + + A+RD A+++A KL+ E+ L+ + + +S+P+ +I S I+ +K + +K+AA A E + L ++ R L +G+K+ VC G+ G E V+ + + V+V + M F +QLS + G S +GG ++ R P G K +S+ V + L+++ G NK++ +K ++ + +RTE NT+D+RG L +A+ S + VY+LHGHG+G VLKS +R WL R ++ KW PA DGGDA+T +ELK
Sbjct: 275 EMQRLLDSDGTTKTNLRDAYYKNRRGIQVTIGKGNPPPLEGISFDLESILNICSEQGAVLEGPEILEISTMMNTMEDIQTWGRALERVVDEDSPSGEDRMFVEIPR---IVHGIELNTTLQDLLEDAFDQQGRLSGKTFPVLGQLRAQVRTLKADILQTLDSIVQLPSIKSKLALESGGPLYSEVASNNGGKGGRLVLPIDPKYASQLGIVHDSSRSGKTVYVEPSEIVGPTNELRQIEHELEAEEARVWRSLTEQVWANQHDLRKSVQAVAQLDLIVARCRLGQRIDGIIPSVEDEGVISLRDAKHPVLLLRKLERVVGSDISLGADGNQGLVLTGPNSGGK--------------------TVILKLLGLLALMSRSGIPIPAAHGDVNGDYVPRVDFFNPVLADIGDIQSVDSDLSTFSGHMLVCREVLALAQTGNALVLMDELGSGTDPNQGVAIAQALLEALMETGCRVAITTHYMQLKQLASSDDRFSVAGMQFVGNRPTYKLLPGVVGESYALA---VAERLKLPQTVLDRANELLDSETRQMGDLIRDLEDQKLLIDNQVLEIEERKKEIAQMEFKMKENKIKLEKRMLTARRDEARKFAKKLEEKEQILEDVLTKLKSDPSRKLITKSWEDIKFVKRDAINEAENVPSVLKKKKQAATALNKAIEELVPLAEIRNRPLLKEGDKLKVCKTGNLFGREAVVIKDNGKQVQVKVSGI--GMTFKNTQLSMVMGG-----EGSNNGGKQQQQGTSRSPAG----------------------KSTRSSKAVQRALKNE------GIDTRNKKQVVGEKKASSSLTIRTEGNTVDVRGFNLEDAKSKVTDKISQCKLSRQKSVYILHGHGSGGVLKSKLREWLKREKKLIKKWAPADSLDGGDAFTRLELK 1129
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: B8CDA4_THAPS (Smr domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDA4_THAPS) HSP 1 Score: 464 bits (1194), Expect = 1.400e-137 Identity = 353/990 (35.66%), Postives = 502/990 (50.71%), Query Frame = 3
Query: 549 VDLFARTWESLDFGVVLERLSGECRTEMGRVRAL----------------------------------VPDFKTTLEEVHELYERVNEVLRLAGDAV------------------------PLRA----GMAVERQ--LAIAAEGSTLEPSEIAAVASALEGLFELRQFFCGVKADAKTAGGMVD---RSGETPRLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLADEGRDAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLLQG-KTPVGNDMSLDTS-MQVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIP--AAPGARVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEAR-SEPTTNVIGSSIGKIRALKTEVEKEAAAPTYTAEDLG-------------LTPLKKRDKLAKGEKVVVCD-GSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSRIPHGGVKWPAQSPSGGSLSKKKRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQD-----DVGSFSSGDSDTNKRRKKGSADNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHGTGVLKSGIRRWLPRNSM-VAKWRPASQGDGGDAYTVVELK 3242
+D+ RT ++LD+ +VL L+ EC T G+ L +P T++E VH + + E+ RL V PL A G + + Q I EG LE EI V + LE ++ + +K + D + L ++ I +D+ L LL AFD EG LS FP IG LR K + ++ I +++D L+A LA E A EI GR VIPV Y+ +GIVHD+SR+GKT YVEPT++VGPTNEL +A+ +L+ E R+ Q+T I +H EI ++A+ ++D+ + R +LG K G +P V EG + + +ARHP+LLL+ + VG+D+ + Q LILTGPN+G K TV+LK LGL A M R GIP+P A ARVD F P+LADIGDLQSV GDLSTFSGH++V + VL+ A+ +LVLMDE+GSGTDP QG A+AQ+LLEAL+D G RVA+TTHY LK+LA++DDRF V+ MQFV GRPTY+LI G +GES AL+ VAERL+LP VI+RA LLD TR + ELI LE ++ + + E +RE E+++ ++ ++E + A+R+ A ++AAKL+ E+ L+ + E+ + S + V+ S IR +K E +A + L ++ +K +K+ +KV+VC G+ G EG V + + + S+R ++S +P G A+ P S+ KR +YL D DV S T KG MR + NT++ G E++ C FS + M + V++LHGHGTGVLK IR WL + V ++PA Q DGG+A T VELK
Sbjct: 362 LDMHQRTLDTLDYPLVLRALANECGTVPGKEIVLDSLMKSGDASKRSKLTRKKKSSTDASDLDGDILTMPLTATSVEGVHRRFGALQEMQRLMEGRVSGWITSSRSQQSSDSNKKKRPQRKPLGAPPIEGYSFDFQPIFEIVDEGKVLEGPEILEVTTMLEIAMDVLDWRYALKEFNEEIDNEADSDLKQEPFVELVSLTDSIEIDDELFDLLTNAFDDEGRLSGTTFPFIGVLRAKVRTFKRDILASIDSLLAMPSMKNKLAVESGGALTMEINGRLVIPVQQKYQN-IGIVHDASRSGKTTYVEPTEIVGPTNELRQAEAELRSEEARVWRQLTETIVKHRAEIERNVASIGQLDVVIGRVKLGKKLNGVVPTVREEGVVSVKDARHPILLLRELEGVVGSDVEIGIDGNQGLILTGPNSGGK--------------------TVILKLLGLYAFMVRDGIPVPSKAYEPARVDFFTPILADIGDLQSVDGDLSTFSGHMLVCREVLNNAQENALVLMDELGSGTDPNQGVAIAQALLEALLDRGCRVAITTHYMDLKQLASTDDRFAVAGMQFVGGRPTYKLIPGMIGESFALA---VAERLKLPQSVIQRANELLDTETRTMGELISSLEDQKLLVDQKQEELKKREFEMLELKAEMKRQQERLEAKQINARREEAAKFAAKLEEKERLLEDILEKLKGSGASKKVVADSWTDIRIIKREALSDAENVPGVMQRLKQQQGQVGDDELVPISEMKGVNKVNIDDKVIVCKKGAFYGKEGVVKEVGKK---ISVAVGGVSVRLTTKEISFLPSAGGVQKAKDPEEQQSSRAKRD----------------------------------MEYLTDEEVFVDVSS-------TATAIDKG----VSMRMDANTVNCIGKNFEESKRKCIDAFSKATMSNRSVVFILHGHGTGVLKKKIRSWLSTDRQWVKSFKPADQADGGEALTRVELK 1279
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Match: A0A1Z5KRL6_FISSO (DNA mismatch repair protein MutS2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRL6_FISSO) HSP 1 Score: 454 bits (1168), Expect = 3.820e-136 Identity = 343/975 (35.18%), Postives = 489/975 (50.15%), Query Frame = 3
Query: 546 DVDLFARTWESLDFGVVLERLSGECRTEMGR------VRALVPD-----------------FKTTLEEVHELYERVNEVLRLAGDAVPLRAGMAVERQLAI---AAEGSTLEPSEIAAVASALEG--LFELRQFFCGVKADAKTAGGMVDRSGETPRLAAVAAEINLDEGLLGLLRGAFDSEGELSAQRFPEIGRLRKKADSLRQGIKSTMDRLMAGGEFSGMLA-DEGRDAYVSEIAGRFVIPVTPTYKRTVGIVHDSSRTGKTLYVEPTQVVGPTNELVEAKLQLKVETQRILSQMTLKIAEHEDEILHSLAAAAEVDLALARGRLGAKTAGTIPKVLNEGTIKLVNARHPVLLLQGKTP---------------------------VGNDMSLDTSMQVLILTGPNAGEKHTERXXXXXXXXXXXSRKRGTVVLKTLGLVALMARAGIPIPAAPGA-RVDLFDPVLADIGDLQSVTGDLSTFSGHLVVAKAVLSGAKAGSLVLMDEMGSGTDPMQGAALAQSLLEALVDAGSRVALTTHYTQLKELAASDDRFGVSAMQFVDGRPTYRLIKGAVGESIALSLSCVAERLELPAFVIERAKSLLDDNTRQVSELIGKLEQERNELQDQLERAARREAEIVQQLEKLAEEREEAAELRSMAKRDAAKEYAAKLDANEKKLKQMFEEARSEPTTNVIGSSIGKIRALKTEV------------EKEAAAPTYTAEDLGLTPL-KKRDK--LAKGEKVVVCD-GSSIGWEGEVLSTSNRDVEVFLPSAEASMRFAFSQLSRIPHGGVKWPAQSPSGGSLSKKKRYPGGVVAGGDAGAGAPGGANAVSAPRKKLGTSRRVAQYLQDDVGSFSSGDSDTNKRRKKGSA--DNYFMRTERNTLDLRGMTLSEAQDDCDLFFSTSIMDDMDGVYLLHGHGTG-VLKSGIRRWLPRNSMVAKWRPASQGDGGDAYTVVELK 3242
++DLF R+W++LDF +L L EC T R ++ P TT+E E Y V+E+ L + R + L++ A L P + LEG L+++ ++ + ++ E L +A+ I L+ LL+ A D +G LS FP +GRLR + +L+ I ++ L+ L+ G Y GR VIPV + +GIVHDSSR+G+T YVEPT++VGPTNEL + + +L+ E RI +T ++ + + + S+ A A++DL +AR RLG GTIP V + G I L NA+HPVLLL+ VG+D+ L Q L+LTGPN+G K T++LK LGL ALMAR+GIPIP + RVD FDP+LADIGDLQSV GDLSTFSGH++V KAVL A +LVLMDE+GSGTDP QG A+AQ+LLEAL++ GSRVA+TTHYTQLK+LA +D+RF V+ MQFV GRPTY+L+ G VGES ALS VAER+ LP V+ERA LLD TRQ+ +LI +LE ++ +R+ AK + KL+ E+ L+++ + +S+P+ V+ S I+ +K + KEA L PL + RDK L G+K++VC G+ G E + + + VEV + S + A L PS + ++ +Y N P+K +S A D+ S SSG + K + +RT+ NT+D+RG TL +A+ + FS+ +M + VY+LHG+GTG +L++ +R WL +S V +W PAS DGGDA+T V L+
Sbjct: 125 ELDLFQRSWDTLDFEPILRALQDECLTVPARKLVQQAIKVDTPQQEKSKQDERQTNRNSSLMATTVEGCQERYRAVHELRTLLTSSKTFRNRNGKQAPLSVFPLAGHSLNLAPL-LEDTTRLLEGPDLYDILSVLNVMEDFILWNQELKEQHAELEHLNRMASSITLNTTFHELLQNALDDKGRLSGTTFPAVGRLRARLRALKSDILLRLETLLKTPSVKAKLSLQSGGPLYSQVSGGRLVIPVETSSANKIGIVHDSSRSGQTSYVEPTEIVGPTNELKQVESELRAEEARIWRSLTAQVQLNREGLELSIQAMAQLDLVMARLRLGESWEGTIPVVEDNGVISLRNAKHPVLLLKAMRKRKKSKLSILSTKSGGNQEDMNDAMDEVVGSDIDLGGRHQGLVLTGPNSGGK--------------------TIILKMLGLAALMARSGIPIPCEDDSPRVDFFDPILADIGDLQSVGGDLSTFSGHMLVCKAVLDQAGKNALVLMDEVGSGTDPAQGVAIAQALLEALLETGSRVAITTHYTQLKQLAVADERFAVAGMQFVRGRPTYKLLPGTVGESFALS---VAERVGLPLSVLERANELLDSETRQMGDLIRELEDQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMLNVRREEAKAFTKKLEEKEQVLEEILRKLKSDPSGKVVAKSWQDIKFVKRDALNEAENVPSVIARKEAEIKEMNEASADLVPLIEMRDKPNLIPGDKLIVCKKGAMFGREASFIKSLSGRVEVSVNGMNVSFKLAEVALP-------------PS--ATTRIAKY------------------NKSRGPQKGSQSSISKAAERALDIESTSSGGNAKVKAQTPPEPVRSAVAIRTQSNTIDVRGCTLEQAKSKAESAFSSCLMSNRSVVYILHGYGTGGILRNKVRNWLKTSSAVKEWAPASAEDGGDAFTRVVLR 1042 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1001.6.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1001.6.6 >prot_P-littoralis_Contig1001.6.6 ID=prot_P-littoralis_Contig1001.6.6|Name=mRNA_P-littoralis_Contig1001.6.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1070bp MAVQQLLVCAAALWPVAAYAFAAPGFLLSPAAGRTAAGVGGAIGRPLPRRback to top mRNA from alignment at P-littoralis_Contig1001:32305..58015+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1001.6.6 ID=mRNA_P-littoralis_Contig1001.6.6|Name=mRNA_P-littoralis_Contig1001.6.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=25711bp|location=Sequence derived from alignment at P-littoralis_Contig1001:32305..58015+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1001:32305..58015+ >mRNA_P-littoralis_Contig1001.6.6 ID=mRNA_P-littoralis_Contig1001.6.6|Name=mRNA_P-littoralis_Contig1001.6.6|organism=Pylaiella littoralis U1_48|type=CDS|length=3210bp|location=Sequence derived from alignment at P-littoralis_Contig1001:32305..58015+ (Pylaiella littoralis U1_48)back to top |