mRNA_P-littoralis_Contig130.64.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: D8LC69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC69_ECTSI) HSP 1 Score: 274 bits (701), Expect = 7.930e-87 Identity = 140/157 (89.17%), Postives = 144/157 (91.72%), Query Frame = 1
Query: 1 VAGTDQGRIYRVRMDTLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGEPLCLVLTQ-----------IRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRV 438
VAGT+QGRIYRVR++TLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDT+DYGVLTTAVVRDAGEPLCLVLTQ IRSHDADTGHLLWSIDNAHA GVTSLV SHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRV
Sbjct: 257 VAGTNQGRIYRVRVETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLTQDMMLTGWRDGQIRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRV 413
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A397D0D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D0D8_9STRA) HSP 1 Score: 182 bits (461), Expect = 4.770e-55 Identity = 93/202 (46.04%), Postives = 128/202 (63.37%), Query Frame = 1
Query: 1 VAGTDQGRIYRVRM--DTLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGEPLCLVLTQIRSHDADTGHLLWSIDNAHARGVTSLVASHNE----------------------RFLVTGGMEGELRVWELRSRDLVSHLKQHGQRVTSLALFSDDVHALSVSRDRSLICWDLRSESQV 534
+AGT G IY V + +++S ++ ENH V V++A SDRFAT S D T+R+WD +DY V+ V++AG P CL + D+DTGH LW IDNAH GVT+LV S+N+ RF+VTGGM G++RVW++R RD+VSHLK+H +T LALF DDVH +S SRD+S +CW+LR+E ++
Sbjct: 1 MAGTQSGFIYHVTVHPSSMSSRLICENHSNGVLSVAFAAQHSDRFATISKDCTIRIWDGSDYSVVVRMAVQNAGMPTCLAFSL---GDSDTGHQLWVIDNAHTGGVTALVLSNNQVTNDSPSPPNIWSYSEYLHPFHRFIVTGGMGGDVRVWDIRKRDMVSHLKEHSMAITGLALFEDDVHLVSCSRDKSFLCWELRTERRI 199
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A7S3HGV0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGV0_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.670e-53 Identity = 96/192 (50.00%), Postives = 131/192 (68.23%), Query Frame = 1
Query: 1 VAGTDQGRIYRVRMDTLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGE----PLCLVLT----------QIRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRVTSLALFSDDVHALSVSRDRSLICWDLRSESQV 534
+A T G + RV + TL IV+SE+H SV V++ +G ++RFATASVDGT++VWD +Y V++T+ R E P CL +I +H A+TG LW +DNAHA GVT+LV SHN RFL++GG GE+R+WE+RSR+L+SHLK+H Q+VT+L LF DD LS SRDR ++ WDL+SE +V
Sbjct: 316 LATTSVGTVTRVNLSTLQYIVISESHTASVLKVAFDQGQNERFATASVDGTLKVWDLVEYTVISTSHARREQERGAIPQCLAFANMLISGWSDGRILAHSAETGDSLWMLDNAHAGGVTALVLSHNRRFLLSGGPAGEVRLWEMRSRELISHLKEHKQKVTALCLFEDDTLCLSGSRDRCILRWDLKSEMRV 507
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A836CKB4_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB4_9STRA) HSP 1 Score: 183 bits (465), Expect = 4.410e-52 Identity = 89/157 (56.69%), Postives = 116/157 (73.89%), Query Frame = 1
Query: 1 VAGTDQGRIYRVRMDTLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGEPLCLVLTQ-----------IRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRV 438
+AGTD+G +YRVR+ TL ++ ++E+ G+V ++YA GVSD+FATA+ DG +R+WD +DY + AVV+DA EPLCL LT+ +R+HDADTG LW +DN H GVT+L S N+RF +TGG GELRVWELRSR+LVSHLKQHGQRV
Sbjct: 232 LAGTDEGFVYRVRVATLDALQLAESPTGAVRALAYAPGVSDKFATAAADGALRLWDASDYTAVMAAVVKDAQEPLCLALTEDMVVSGWRDGRLRAHDADTGKALWLMDNTHVEGVTALALSRNQRFALTGGQGGELRVWELRSRELVSHLKQHGQRV 388
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A024U0G1_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024U0G1_9STRA) HSP 1 Score: 181 bits (460), Expect = 7.230e-51 Identity = 91/183 (49.73%), Postives = 122/183 (66.67%), Query Frame = 1
Query: 1 VAGTDQGRIYRVRMD----TLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGEPLCLVLTQ-----------IRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRVTSLALFSDDVHALSVSRDRSLI 504
+AGT G IY V + ++AS ++ ENH V +++A SDRFAT S D T+R+WD +DY V+ A V++AG P CL + +R H +DTG LLW IDNAH GVT+LV S+N+RF+VTGGM G++RVW++R RD+VSHLK+H +T LALF DDVH LS SRD+S +
Sbjct: 301 MAGTQSGFIYHVTVHPSQPSMASRLICENHSNGVLAIAFAPQHSDRFATISKDCTIRIWDGSDYSVVVRAAVQNAGMPTCLAFSLDIVLSGWQDGCLRCHSSDTGQLLWVIDNAHTGGVTALVLSNNQRFIVTGGMGGDVRVWDIRKRDMVSHLKEHSMAITGLALFDDDVHLLSCSRDKSFL 483
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A7S1G408_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G408_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.370e-49 Identity = 87/162 (53.70%), Postives = 109/162 (67.28%), Query Frame = 1
Query: 82 GSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGEPLCLVLT-----------QIRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRVTSLALFSDDVHALSVSRDRSLICWDLRSESQV 534
G V +SYA GVSDRFAT S D TVR+WD +DY V A V+D G P + + +R H ADTG LW I +AH G+TS + S+N+RF +TGG+ GE+RVWELRSR++VSHLK+H VT L LF DDVHALS SRDRS +CWDL+ E ++
Sbjct: 402 GGVVSMSYAAGVSDRFATVSEDNTVRIWDASDYTVPVKAFVKDGGHPTSVAYSLDALLSGWEDGHLRCHHADTGEQLWRIADAHRGGITSTIISNNQRFCLTGGVAGEVRVWELRSREMVSHLKEHTMGVTRLTLFDDDVHALSCSRDRSFLCWDLKREKRI 563
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A7S3KXG2_EUPCR (Hypothetical protein n=2 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KXG2_EUPCR) HSP 1 Score: 166 bits (420), Expect = 9.540e-48 Identity = 78/170 (45.88%), Postives = 109/170 (64.12%), Query Frame = 1
Query: 58 IVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGEPLCLVLTQ-----------IRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRVTSLALFSDDVHALSVSRDRSLICWDLRSESQV 534
+++ ENH V VS+ G+SD+FAT S D T+R+WD+ DY V V G P C T+ IRS D LLW+IDNAH GVT+L SHN +FL TGG G++RVWE+RSR+L+SHLK+H VT + + DD+H LS +RD++++CWDL++E ++
Sbjct: 1 MLLGENHISDVLQVSFMDGISDKFATCSEDTTIRLWDSNDYSVYARCAVLAGGHPTCCSFTEEVVISGWSDGKIRSFRTDNCELLWAIDNAHKNGVTTLCISHNFKFLATGGYSGDVRVWEIRSRELISHLKEHTSTVTKVEVLEDDIHLLSCARDKAILCWDLKNEKRL 170
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A8J5XUL4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUL4_DIALT) HSP 1 Score: 170 bits (430), Expect = 1.890e-46 Identity = 93/189 (49.21%), Postives = 120/189 (63.49%), Query Frame = 1
Query: 7 GTDQGRIYRVRMDTLASI--VVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGEPLCLVLT-----------QIRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRVTSLALFSDDVHALSVSRDRSLICWDLRSESQV 534
GT IY + + + +VSENH V VSYA G S RFATAS D +VRVW+ +DY V T R+ G PL L + +IR++DAD G LW+IDN H GV++L SHN+RFL +GGM GE+RVWEL++R LVSHL QH +VTSLAL DD+ S S+D++ ICWDLR E ++
Sbjct: 321 GTSTAVIYELDLAAARARPRIVSENHCARVVAVSYAPGDSVRFATASDDLSVRVWNASDYSVETHCSSRNCGRPLSLAFSGTAVFVGWEDGKIRAYDADEGVELWAIDNCHKGGVSALALSHNQRFLCSGGMRGEVRVWELKTRTLVSHLVQHDDQVTSLALSDDDLLLYSASKDKTFICWDLRLEKRL 509
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A8J8P5I7_HALGN (ANAPC4_WD40 domain-containing protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P5I7_HALGN) HSP 1 Score: 170 bits (430), Expect = 2.420e-46 Identity = 82/191 (42.93%), Postives = 121/191 (63.35%), Query Frame = 1
Query: 1 VAGTDQGRIYRVRMDTLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLT--TAVVRDAGEPLCLVLT-----------QIRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRVTSLALFSDDVHALSVSRDRSLICWDLRSESQV 534
+ TD+G IYR+R+ + +++ ENH +V + GVSD+F+T S DGT+R+WD+ DY V + + PLC + T +IRS + LW IDNAH GVT++ S N +F+ +GG EGE+RVWE+RSR+LVSHLK+H +VT + +F DD H ++ +RDRS++CWDL+ E +V
Sbjct: 342 LTATDKGFIYRMRVSDFSKMLLCENHTEAVVDTYFMAGVSDKFSTCSEDGTIRLWDSNDYSVTARCSVMAMQGVFPLCSLFTDEVIIAGWSDGKIRSFRIEGSAPLWQIDNAHKNGVTAICLSFNSKFICSGGFEGEVRVWEIRSRELVSHLKEHSSKVTRVQVFPDDTHLMTSARDRSILCWDLKQEKRV 532
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Match: A0A7S2W1F3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1F3_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.290e-45 Identity = 82/157 (52.23%), Postives = 111/157 (70.70%), Query Frame = 1
Query: 1 VAGTDQGRIYRVRMDTLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTADYGVLTTAVVRDAGEPLCLVLT-----------QIRSHDADTGHLLWSIDNAHARGVTSLVASHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQRV 438
+AGT G +YR+ + L +++V+ENH V CVS++ S+RFATAS D T+RVWD +Y VLTT +RDAG P CL T ++R+HD+++G LW IDNAH GVT+L S+NER+++TGG EGE+R+WELRSR+LVSHLK+H RV
Sbjct: 351 LAGTKFGFVYRMSTERLEAVLVNENHYRPVKCVSFSPETSERFATASEDCTIRVWDATEYTVLTTVQLRDAGAPACLAYTLDFLISGWEDGRVRAHDSESGDFLWMIDNAHRGGVTALELSNNERYIMTGGAEGEVRIWELRSRELVSHLKEHTLRV 507 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig130.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig130.64.1 >prot_P-littoralis_Contig130.64.1 ID=prot_P-littoralis_Contig130.64.1|Name=mRNA_P-littoralis_Contig130.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=178bp VAGTDQGRIYRVRMDTLASIVVSENHRGSVTCVSYARGVSDRFATASVDGback to top mRNA from alignment at P-littoralis_Contig130:288669..289963- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig130.64.1 ID=mRNA_P-littoralis_Contig130.64.1|Name=mRNA_P-littoralis_Contig130.64.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1295bp|location=Sequence derived from alignment at P-littoralis_Contig130:288669..289963- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig130:288669..289963- >mRNA_P-littoralis_Contig130.64.1 ID=mRNA_P-littoralis_Contig130.64.1|Name=mRNA_P-littoralis_Contig130.64.1|organism=Pylaiella littoralis U1_48|type=CDS|length=534bp|location=Sequence derived from alignment at P-littoralis_Contig130:288669..289963- (Pylaiella littoralis U1_48)back to top |