prot_P-littoralis_Contig13.173.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig13.173.1
Unique Name	prot_P-littoralis_Contig13.173.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	547

Homology

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BLAST of mRNA_P-littoralis_Contig13.173.1 vs. uniprot
Match: A0A6H5K6Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Z1_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.120e-54
Identity = 127/230 (55.22%), Postives = 142/230 (61.74%), Query Frame = 0

Query:  118 GSRSVPWWYPSRGWGMLPSDGEEGGAAXXXXXGGGGWPGLEFPLRRYSREEAKLAGEAVQNWVAYGFAEKEEEGGKEGDEAVVMPVCHACEAGNDTLRKLGASLDRCASPYYSLPEIHPSQLVYTEVDPAVEAANKLREQRQEANRRSREKKREADAEGRRGLAGSGRGVEGGEYQQDEEEVERKEDSFLGIFLFLKGDFFSVELENALTSVRSAYPRAWVVKADAPSFL 347
            G  SVPWWYPSR WG LPSD    G+ XXXXX    W GL  P RR+ REEAKLA ++V +WVA G AE+EE  G     ++VMP C   EAGN TLR+LGAS+DRCASPYY+LPEIHPSQLVYTEVDPA  A  + RE                                               D+FLGIFLFLKGDFFSVELENALTS+  AYPRAWVVKA+APSFL
Sbjct:   77 GDSSVPWWYPSRDWG-LPSDAV--GSGXXXXXXXXXWTGLGVPRRRF-REEAKLAEDSVASWVASGLAEEEERQGG----SMVMPTCDVLEAGNHTLRRLGASVDRCASPYYTLPEIHPSQLVYTEVDPAEAAEKREREXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNFLGIFLFLKGDFFSVELENALTSIMPAYPRAWVVKANAPSFL 291

[Close]

BLAST of mRNA_P-littoralis_Contig13.173.1 vs. uniprot
Match: D7FLZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLZ4_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 7.240e-54
Identity = 130/228 (57.02%), Postives = 143/228 (62.72%), Query Frame = 0

Query:  121 SVPWWYPSRGWGMLPSDGEEGGAAXXXXXGGGGWPGLEFPLRRYSREEAKLAGEAVQNWVAYGFAEKEEEGGKEGDEAVVMPVCHACEAGNDTLRKLGASLDRCASPYYSLPEIHPSQLVYTEVDPAVEAANKLREQRQEANRRSREKKREADAEGRRGLAGSGRGVEGGEYQQDEEEVERKEDSFLGIFLFLKGDFFSVELENALTSVRSAYPRAWVVKADAPSFLS 348
            SVPWWYPSR WG LPSD    G+ XXXXX    W GL  P RR+ REEAKLA E V +WVA G AE+EE  G     +VVMP C   EAGN TLR+LGAS+DRCASPYY+LPEIHPSQLVYTEVDPA EAA K   + +                                            D+FLGIFLFLKGDFFSVELENALTS+  AYPRAWVVKA+APSFLS
Sbjct:   85 SVPWWYPSRDWG-LPSDAV--GSGXXXXXXXXXWTGLGVPRRRF-REEAKLAEEFVASWVASGLAEEEERRGG----SVVMPACDVLEAGNHTLRRLGASVDRCASPYYALPEIHPSQLVYTEVDPA-EAAEK---RERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNFLGIFLFLKGDFFSVELENALTSIMPAYPRAWVVKANAPSFLS 300

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig13.173.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig13.173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5K6Z1_9PHAE	2.120e-54	55.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FLZ4_ECTSI	7.240e-54	57.02	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 247..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 499..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 299..386

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig13	contig	P-littoralis_Contig13:903706..919968 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig13.173.1	mRNA_P-littoralis_Contig13.173.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig13 903627..921520 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig13.173.1 ID=prot_P-littoralis_Contig13.173.1|Name=mRNA_P-littoralis_Contig13.173.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=547bp
MEGERISGEASSSSLARCHRTRRTRGGKRRYQRGKATAATATTATTATAA
ALTREGKAARRHPRAINTPPPTLPSPTPSSWSALAAVAAAVVLLSASVAD
AGSSSYGASGGSGSGSGGSRSVPWWYPSRGWGMLPSDGEEGGAAGAAAVG
GGGWPGLEFPLRRYSREEAKLAGEAVQNWVAYGFAEKEEEGGKEGDEAVV
MPVCHACEAGNDTLRKLGASLDRCASPYYSLPEIHPSQLVYTEVDPAVEA
ANKLREQRQEANRRSREKKREADAEGRRGLAGSGRGVEGGEYQQDEEEVE
RKEDSFLGIFLFLKGDFFSVELENALTSVRSAYPRAWVVKADAPSFLSFC
VQYDLHTFPQLLLFRNGHLMSRYRGKRSPGGLAAWFSLMTGDLPRAVPRR
PLPPPPPPHPLSPPGLDEPLTWLALMYAAAKIATAVSWFVKRRRRGGGGV
GGADGQQGAGGRRGAAAAVGRWVARSRLWLARVLYGRGRVGGAGAGTGLG
AGEGGSRPRAAATGNNAGGATGSATSGDAAVLRRGAVPGDRPVGEQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf