prot_P-littoralis_Contig129.113.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: D7FTW6_ECTSI (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW6_ECTSI) HSP 1 Score: 590 bits (1522), Expect = 9.680e-204 Identity = 364/563 (64.65%), Postives = 400/563 (71.05%), Query Frame = 0
Query: 1 MDMGAET--VAPASPEDVVDSPSDRPSKEPEKPESTPVAVEAVAAPAAEEGSSSSVVDSGDDGSVSPQPGASAPAEVSSDDTSGKEDTPEGEIAAXXXXXXXXVPVEELSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSKDIRAVAQALKGSELLVVTKATRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAESTVESLTPFFSACGVAEAVRLIHKNKQ------DSRGSQIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRNSWRGGLRVSLANGVTVEKALAKLKAAAGKKARQEQKDRVNSRSPFERAERRGNADGNVRDGQMRSRSLTELELESTTGANDGAGRRGREQRSPPPDRRIPREDEGSSGDGVEGTPTRTTXXXXXXXXXXXXXRKPRSVSNVDALYDG--GGGGGRIQTGSLSRHD--TAGDGLPRKGVVQTLSSEGWSWIKKDGSGSRKSGNRIPFAMGDVVIKDGEQQQPLQKGDLVEYRAWKDSEGRLMAVRVERAKERPXXXXXXXXXXXTRATQAHFR 551
MD+ +T V P SPE VV S + P+ E VAAPA+EE S VV+ G++G TSGKEDT E+A PVEEL ++TKAALVKQVEFYFSDENLPTDAFMKK+VKAGGAQGWVPLKVICSFPKVKK+SKDIRA+A AL+ S+ LVV KATRVRRKTPFKFPDKDG +DV +RTVVAVNIPAESTVESLTPFFS+CGVAE +R+IHK+K D+R S IQAP GPNRDLYATCQFSTLEEAIRAVNELTDR SWRGGLRVSLANGVTVEKALAKLKAA+ KKA+QEQK RVNSRSP +R +R NVRDGQMRSRSLTELELE T GA+ GA R XXXXXX RKPRSVSNVDAL+ GG GG I+ GS RH +AGDGLPRKGVVQTLSSEGWSWIKKDG GSRKSGNRIPF MGDVV+KDGEQ+QPLQKGD VEYR WKD+EGR MAVRVERAKERP +R+TQAHFR
Sbjct: 1 MDVRDDTAVVVPPSPEPVVASSA-----------KMPLDTETVAAPASEEASGPVVVEDGENGLAPXXXXXXXXXXXXXXXTSGKEDT--AEVAP---------PVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKMSKDIRAIALALEDSQALVVAKATRVRRKTPFKFPDKDGRADVTSRTVVAVNIPAESTVESLTPFFSSCGVAELIRVIHKSKTAGTTKTDNRSSGIQAPAGPNRDLYATCQFSTLEEAIRAVNELTDRKSWRGGLRVSLANGVTVEKALAKLKAASNKKAKQEQKQRVNSRSPVDRGQR------NVRDGQMRSRSLTELELERTAGASGGASSRXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXGEAAPTTRKPRSVSNVDALFSSSTGGSGGGIENGSPPRHTMGSAGDGLPRKGVVQTLSSEGWSWIKKDGQGSRKSGNRIPFVMGDVVMKDGEQRQPLQKGDHVEYRVWKDTEGRSMAVRVERAKERPRPAGGAVGSG-SRSTQAHFR 525
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE) HSP 1 Score: 180 bits (456), Expect = 8.350e-44 Identity = 105/155 (67.74%), Postives = 118/155 (76.13%), Query Frame = 0
Query: 35 PVAVEAVAAPAAEEGSSSSVVDSGDDGSVSPQPGASAPAEVSSDDTSGKEDTPEGEIAAXXXXXXXXVPVEELSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSKDIRAVAQALKGSELLVVTKATRVRRK 189
P+ E VAAPA+EEGS V + G+ G P AS+ A VSSD+T+GKEDT E PVEEL ++TKAALVKQVEFYFSDENLPTDAFMKK+VKAGGAQGWVPLKVICSFPKVKKLSKDIRA+A AL+ S+ LVV KATRVRRK
Sbjct: 1108 PLNTETVAAPASEEGSGPVVAEDGESGLAPPAAMASSAAVVSSDETNGKEDTSEAP------------PVEELPEDTKAALVKQVEFYFSDENLPTDAFMKKKVKAGGAQGWVPLKVICSFPKVKKLSKDIRAIALALEDSQALVVAKATRVRRK 1250
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: A0A5J4Y4J7_9CHLO (La-related 7 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4J7_9CHLO) HSP 1 Score: 140 bits (352), Expect = 5.790e-33 Identity = 79/183 (43.17%), Postives = 114/183 (62.30%), Query Frame = 0
Query: 113 AALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSKDIRAVAQALKGSELLVVTKATRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAESTVESLTPFFSACGVAEAVRLIHKNKQDSRGSQI--QAPVGPNRDLYATCQFSTLEEAIRAVNELTDRNSWRGGLRVSL 293
A +VKQV FYFSD NLPTD F+ K V+ +GWVP+++I SF ++K LSKDI+ +A AL+ S LVV+ RVRRK P D+ ++V+ RT + N+P ++T++SLT FSA G + VR+ N +Q A + +R L+A +F E+ AV +LTD N+WR GLR ++
Sbjct: 50 AKIVKQVNFYFSDTNLPTDNFLLKEVRKT-PEGWVPIRLIASFKRMKSLSKDIKVIAAALETSTELVVS-GHRVRRKEPLPQVDE---TEVLYRTAIVDNLPDQATIDSLTGMFSAAGKVKMVRICQPNSGPRSIAQSIPGADLAVSRQLHALIEFENQEQVAAAVKQLTDSNNWRSGLRAAI 227
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: A0A7S0IBH0_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IBH0_MICPS) HSP 1 Score: 131 bits (330), Expect = 1.930e-30 Identity = 87/196 (44.39%), Postives = 113/196 (57.65%), Query Frame = 0
Query: 107 LSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSKD---IRAVAQALKG-SELLVVTK-ATRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAESTVESLTPFFSACGVAEAVRLIHKNKQDSRG----SQIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRNSWRGGLRVSL 293
L+DE +VKQVEFYFSD NLPTDAF+ K+V+A G+VP+ V+C F ++K L K I VA L+ SE LVV++ RV+R TP PD D + DV ARTVVA N + T+ES+ FSA G VR+ H Q G S + P+ ++A +F T ++A RA L D WR GLRV L
Sbjct: 73 LTDEQVDKIVKQVEFYFSDANLPTDAFLMKKVRAD-PNGFVPIGVVCGFNRMKTLLKKHPPIETVAAILRQHSEALVVSEDGIRVQRATP--LPDID-LEDVQARTVVAENFKTQPTIESVRDLFSAAGDVAMVRVRHPGMQTPAGATKPSGLDLIATPSNAVHALIEFKTRDDAARAAETLNDDEDWRNGLRVRL 264
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: A0A2R6XE71_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XE71_MARPO) HSP 1 Score: 136 bits (342), Expect = 2.350e-30 Identity = 80/191 (41.88%), Postives = 121/191 (63.35%), Query Frame = 0
Query: 107 LSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSKDIRAVAQALKGSELLVVTK-ATRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAESTVESLTPFFSACGVAEAVRLIHK---NKQDSRGSQIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRNSWRGGLRVSL 293
+++E KA +VKQVEFYFSD+NLPTD ++ K VK +G+VP+ V+ SF K+K L K+ VA AL+ S LLVV++ +VRR P PD D + +V +RTVVA N+P + ++ES+ F + G + VR+ N ++ ++ + + L+A +F T+E+A +AV+ LTD +WR GLRV L
Sbjct: 195 VNEELKAKIVKQVEFYFSDQNLPTDNYLMKFVKKD-PEGFVPIPVVASFRKIKNLVKNHGIVAAALRNSTLLVVSEDGKKVRRAQP--LPDVD-LEEVQSRTVVAENLPEDHSIESVEQLFGSVGNVKMVRICQPEAANGASQTAAKFKSDMVVSNKLHALIEFETVEQAEKAVSALTDERNWRSGLRVRL 381
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: C1E3K5_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E3K5_MICCC) HSP 1 Score: 133 bits (335), Expect = 2.920e-30 Identity = 88/196 (44.90%), Postives = 114/196 (58.16%), Query Frame = 0
Query: 107 LSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSKD---IRAVAQALKG-SELLVVTK-ATRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAESTVESLTPFFSACGVAEAVRLIHKNKQDSRG----SQIQAPVGPNRDLYATCQFSTLEEAIRAVNELTDRNSWRGGLRVSL 293
L+DE +VKQVEFYFSD NLPTDAF+ K+V+A G+VP+ V+C F ++K L K I VA L+ SE LVV++ RVRR TP PD D + DV ARTVVA N + T+ES+ FSA G VR+ H Q G S + P+ ++A +F+T ++A RA L D WR GLRV L
Sbjct: 59 LTDEQVDKIVKQVEFYFSDANLPTDAFLMKKVRAD-PNGFVPIGVVCGFNRMKTLLKKHPPIETVAAILRQHSEALVVSEDGIRVRRATP--LPDID-LEDVQARTVVAENFKTQPTIESVRDLFSAAGDVAMVRVRHPGMQTPAGATKPSGLDLIATPSNAVHALIEFNTRDDAARAAETLNDDKDWRNGLRVRL 250
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: D8QWC1_SELML (Uncharacterized protein (Fragment) n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QWC1_SELML) HSP 1 Score: 129 bits (323), Expect = 8.710e-30 Identity = 77/193 (39.90%), Postives = 116/193 (60.10%), Query Frame = 0
Query: 107 LSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSKDIRAVAQALKGSELLVVTK-ATRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAESTVESLTPFFSACGVAEAVRLIHKNKQDSRGSQIQAPVGP-----NRDLYATCQFSTLEEAIRAVNELTDRNSWRGGLRVSL 293
LS++T+ +V+QVEFYFSD NLPTD ++ K +K +G+VP+ +I SF K+K+L+K+ A+A AL+ S LVV++ +VRR P D D ++ RTVVA N+P + +++SL F G + VR+ +S S A + L+A ++ TLE+A +AV ELTD+ +WR GL V L
Sbjct: 76 LSEDTRTQVVQQVEFYFSDANLPTDNYLMKFIKKD-PEGFVPIPIIGSFRKIKQLTKNYGALAAALRSSSKLVVSEDGKKVRRAEPLADIDLD---EIQGRTVVAENLPEDHSIQSLEKLFGTIGSVKMVRVCEPGSANSVNSAALAKHSKTDRVVSNKLHALVEYETLEQAEKAVAELTDQRNWRSGLHVRL 264
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: C1N3J9_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N3J9_MICPC) HSP 1 Score: 131 bits (329), Expect = 3.050e-29 Identity = 85/201 (42.29%), Postives = 111/201 (55.22%), Query Frame = 0
Query: 107 LSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSK----DIRAVAQALKGSELLVVTKA-TRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAES-----TVESLTPFFSACGVAEAVRLIHKNKQDSRGSQIQAPVG------PNRDLYATCQFSTLEEAIRAVNELTDRNSWRGGLRV 291
L+ E K + QVEFYFSD NLPTDAF+ K+V+AGG +GWVPL VICSF ++K+L K + A GS LLV A T VRR P PD D + +V +RTV+A N P + T+E++ F++ G VR+ H G G PN ++A +F T EEA+RAV L + WR GLRV
Sbjct: 73 LTAEQKEKIFAQVEFYFSDANLPTDAFLMKKVRAGGDEGWVPLDVICSFNRMKQLLKKRPHSVVCDVLAELGSALLVSDDAKTAVRRVAP--LPDVD-LEEVQSRTVLAENFPGVNAGEAPTIEAVRELFASAGEVLVVRVRHPGMTQPAGVAAAKSSGLDLIQTPNAHVHALVEFKTAEEALRAVTTLNNDRDWRNGLRV 270
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: A0A7R9TLI1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TLI1_MICPS) HSP 1 Score: 131 bits (329), Expect = 4.050e-29 Identity = 85/201 (42.29%), Postives = 111/201 (55.22%), Query Frame = 0
Query: 107 LSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSK----DIRAVAQALKGSELLVVTKA-TRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAES-----TVESLTPFFSACGVAEAVRLIHKNKQDSRGSQIQAPVG------PNRDLYATCQFSTLEEAIRAVNELTDRNSWRGGLRV 291
L+ E K + QVEFYFSD NLPTDAF+ K+V+AGG +GWVPL VICSF ++K+L K + A GS LLV A T VRR P PD D + +V +RTV+A N P + T+E++ F++ G VR+ H G G PN ++A +F T EEA+RAV L + WR GLRV
Sbjct: 52 LTAEQKEKIFAQVEFYFSDANLPTDAFLMKKVRAGGDEGWVPLDVICSFNRMKQLLKKRPHSVVCDVLAELGSALLVSDDAKTAVRRVAP--LPDVD-LEEVQSRTVLAENFPGVNAGEAPTIEAVRELFASAGEVLVVRVRHPGMTQPAGVAAAKSSGLDLIQTPNAHVHALVEFKTAEEALRAVTTLNNDRDWRNGLRV 249
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Match: A0A2K1LA96_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LA96_PHYPA) HSP 1 Score: 132 bits (331), Expect = 9.990e-29 Identity = 81/194 (41.75%), Postives = 118/194 (60.82%), Query Frame = 0
Query: 107 LSDETKAALVKQVEFYFSDENLPTDAFMKKRVKAGGAQGWVPLKVICSFPKVKKLSKDIRAVAQALKGSELLVVTK-ATRVRRKTPFKFPDKDGMSDVIARTVVAVNIPAESTVESLTPFFSACGVAEAVRLIHKNKQDSRGSQIQAPVGPNRD------LYATCQFSTLEEAIRAVNELTDRNSWRGGLRVSL 293
L++ETKA +VKQVEFYFSD NLPTD ++ K VK ++G+VP+ V+ SF K+K L K+ +A L+ S LVV++ +VRR P P+ D + ++ ARTVVA N+P + ++ESL F G + VR+ + + + G+ P D L+A ++ T+E A +AV ELTD +WR GLRV L
Sbjct: 241 LTEETKAKIVKQVEFYFSDTNLPTDNYLMKFVKKD-SEGFVPIPVVASFRKIKNLVKNHGVLAATLRNSTQLVVSEDGKKVRRAHP--LPEVD-LEEIQARTVVAENLPEDHSIESLEQLFGKVGTVKMVRIC--SPEAANGANATGAKHPKTDMLVSNKLHALVEYETVELAEKAVAELTDERNWRSGLRVRL 428 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig129.113.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig129.113.2 ID=prot_P-littoralis_Contig129.113.2|Name=mRNA_P-littoralis_Contig129.113.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=652bpback to top |