prot_P-littoralis_Contig129.90.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig129.90.1
Unique Nameprot_P-littoralis_Contig129.90.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length70
Homology
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BLAST of mRNA_P-littoralis_Contig129.90.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 9.760e-20
Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 0 
Query:    1 RGQRVPRQVPPTLEQLKGMSRDDVKKRCTTRQLVVLKNAAGIQRGTINSRKEDLLDYLDEYVGGFR 66
            +G R PRQ PPTL+QLKGMSR +++ RCTT+QLVVL  AA I +GT+NSRK DLLDYL+ +V GFR
Sbjct:  403 KGGRAPRQAPPTLDQLKGMSRAEIRDRCTTKQLVVLTKAAEIPKGTVNSRKADLLDYLETFVCGFR 468
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BLAST of mRNA_P-littoralis_Contig129.90.1 vs. uniprot
Match: A0A6H5K5B1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5B1_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.460e-17
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0 
Query:    7 RQVPPTLEQLKGMSRDDVKKRCTTRQLVVLKNAAGIQRGTINSRKEDLLDYLDEYVGGFRCDS 69
            RQ PPTL QLKGMSR D+  RCT RQL++L   AGI++GT+NSR++DLLDYL  YVGGF  +S
Sbjct:  238 RQAPPTLNQLKGMSRVDISDRCTVRQLLLLVKDAGIKKGTMNSRQDDLLDYLAAYVGGFGQES 300
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig129.90.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K201_9PHAE9.760e-2066.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5B1_9PHAE1.460e-1765.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig129contigP-littoralis_Contig129:328225..328434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig129.90.1mRNA_P-littoralis_Contig129.90.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig129 328225..328434 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig129.90.1 ID=prot_P-littoralis_Contig129.90.1|Name=mRNA_P-littoralis_Contig129.90.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=70bp
RGQRVPRQVPPTLEQLKGMSRDDVKKRCTTRQLVVLKNAAGIQRGTINSR
KEDLLDYLDEYVGGFRCDSG
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