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Homology
BLAST of mRNA_P-littoralis_Contig129.54.2 vs. uniprot
Match: A0A6H5KZJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ8_9PHAE) HSP 1 Score: 392 bits (1008), Expect = 4.030e-117 Identity = 248/512 (48.44%), Postives = 302/512 (58.98%), Query Frame = 2
Query: 740 GVLSRVTKTAAXXXXXXXXVGVLA----TAPAGVGALMTEAQCESATLRGTEAELMESPRSDNSTEAAAAGVDQTIVATQTTFDRMVTDQLAIA-RTDGRDIAFRNLWSDHVWLGTAEVTFAEAEALALFLEGSLPEFNCMNEHYGLSFVKGDAGETHAEGTLTADKVLNWSLLGPDYVALDGVYSFTPTDVTSVPSTTYLVAAAQTEEDGVFDVPVFHYFLAESVDDVDPPDCPEPCTGEVVSYYMSFDLTGDVFLLGVSSADADDPRPCWLNLFDAVKDGPPAGGVDASLWEELELCTAELIQ---ENFVDGDGTSDASDASSXXXXXXXXXXXXXXXXVLIPAILAIFVIAAFGLCRHQRHRRAKKMKTTDEAWGVGLDGNGGERGKKSGSGTPPSRPRPPAGRFKLA---PLVTQASKAVTDSDAGGVGDGNVLGVASLTSFSPXXXXXXVLTDVSIDEQDDGAGVDXXXXXXXXXXXXXXXXXXXAGVAVLADE----EGVEDSVYP 2230
GVL R + A V VLA +AP VGAL+TE+QCE ATLRGTEAEL +SPR D STEAAAAGVDQ IVAT T+DRMV DQL I +GRD+ FRNLWSDHVW TA +TF A+ L EGS PEF CMNEHYGLSF KG+AGET+A+G LT+DKVLNWSLLG DY+AL GV SFTPT+ +++PSTT+LVAA + P FHYFLAE +D+DP CPEPC+ +VV+YY S G V+ L ++ A+ P PCWL+LF AV DGPPA GVD ++WE CTA L+Q ++ G GT+ A+ ++ VL+PA+L FV+ AFG RHQ+ R +K++ TDEAWG GLDGNG +GK PRPP G+FKL + AS+A AG VLTDVSIDE + G GV V+ +E EG ED VYP
Sbjct: 122 GVLGRAATSFAA-------VSVLAVAVTSAPVSVGALVTESQCEVATLRGTEAELGDSPRLDTSTEAAAAGVDQAIVATNATYDRMVLDQLRITFLEEGRDVKFRNLWSDHVWKNTARMTFPGADVLVHLEEGSPPEFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLGADYLALAGVTSFTPTEASTLPSTTFLVAAREPVVSEEL-TPDFHYFLAEPAEDMDPSACPEPCSEQVVTYYWS-STAGTVYQLDMADVAAEPP-PCWLDLFQAVADGPPAEGVDPAVWEATLTCTAGLLQAVEDSMASGGGTAVAAGRAA----------------VLVPALLVSFVLLAFGFFRHQKGRWLRKIRATDEAWGEGLDGNG--KGKA---------PRPPTGKFKLGIDGGVAVAASRAPAAVAAGA------------DRLKASHAPQRVLTDVSIDEGEAPTG--------GMAVTAGRKQQQVVGVVVVDEELGGNEGGEDMVYP 576
BLAST of mRNA_P-littoralis_Contig129.54.2 vs. uniprot
Match: D8LJR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR6_ECTSI) HSP 1 Score: 340 bits (873), Expect = 4.780e-99 Identity = 214/475 (45.05%), Postives = 263/475 (55.37%), Query Frame = 2
Query: 830 GALMTEAQCESATLRGTEAELMESPRSDNSTEAAAAGVDQTIVATQTTFDRMVTDQLAIA-RTDGRDIAFRNLWSDHVWLGTAEVTFAEAEALALFLEGSLPEFNCMNEHYGLSFVKGDAGETHAEGTLTADKVLNWSLLGPDYVALDGVYSFTPTDVTSVPSTTYLVAAAQTEEDGVFDVPVFHYFLAESVDDVDPPDCPEPCTGEVVSYYMSFDLTGDVFLLGVSSADADDPRPCWLNLFDAVKDGPPAGGVDASLWEELELCTAELIQENFVDGDGTSDASDASSXXXXXXXXXXXXXXXXVLIPAILAIFVIAAFGLCRHQRHRRAKKMKTTDEAWGVGLDGNGGERGKKSGSGTPPSRPRPPAGRFKLA---PLVTQASKAVTDSDAGGVGDGNVLGVASLTSFSPXXXXXXVLTDVSIDEQDDGAGVDXXXXXXXXXXXXXXXXXXXAGVAVLADE----EGVEDSVYP 2230
GAL+T++QC+ ATLRGTEA+L +SPR D STEAAAAGVDQ IVAT T+DRMV DQL I +GRD+ FRNLWSDHVW TA +TF A+ L L EGS EF CMNEHYGLSF KG+AGET+A+G LT+DKVLNWSLLG DY+ALDGV SFTPT+ +++PSTT+L AA + + P FHYFLAE +D+DP CPEPC+ +VV+YY S G V+ L ++ A+ P PCWL LF AV DGPPA GVD ++WE CTA L+Q + + R +K++TTDEAWG LDGNG +GK PRPP G+FKL + AS+A + AG V TDVSIDE + AG G+ + +E EG ED VYP
Sbjct: 158 GALVTDSQCKVATLRGTEADLGDSPRLDTSTEAAAAGVDQAIVATNATYDRMVLDQLQITILEEGRDVKFRNLWSDHVWKNTARMTFPGADVLVLLEEGSPAEFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLGADYLALDGVSSFTPTEASTLPSTTFLAAAREPDVSEEL-TPDFHYFLAEPAEDMDPSACPEPCSEQVVTYYWS-STAGTVYQLDMADVSAEPP-PCWLGLFQAVADGPPAEGVDPAVWEATVTCTAGLLQ------------------------------------------------AVEESMKGRWLRKIRTTDEAWGEELDGNG--KGKA---------PRPPTGKFKLGIDGGVAVAASRAPSAVAAGA------------DRLKASHAPQRVFTDVSIDEGEAPAG--------GMAATTERKQQRVVGMVTVDEELGGNEGGEDMVYP 550
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 5211 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-12_003000.1 |
| Cds size | 1911 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789575.142101-UTR-P-littoralis_Contig129:179216..179393 | 1680789575.142101-UTR-P-littoralis_Contig129:179216..179393 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig129 179217..179393 + |
| 1680789575.1512523-UTR-P-littoralis_Contig129:185469..185614 | 1680789575.1512523-UTR-P-littoralis_Contig129:185469..185614 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig129 185470..185614 + |
| 1680789575.2133-UTR-P-littoralis_Contig129:189616..191434 | 1680789575.2133-UTR-P-littoralis_Contig129:189616..191434 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig129 189617..191434 + |
| 1680789575.22311-UTR-P-littoralis_Contig129:191667..192827 | 1680789575.22311-UTR-P-littoralis_Contig129:191667..192827 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig129 191668..192827 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789575.1628568-CDS-P-littoralis_Contig129:185614..186259 | 1680789575.1628568-CDS-P-littoralis_Contig129:185614..186259 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig129 185615..186259 + |
| 1680789575.1727352-CDS-P-littoralis_Contig129:186494..186605 | 1680789575.1727352-CDS-P-littoralis_Contig129:186494..186605 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig129 186495..186605 + |
| 1680789575.1818717-CDS-P-littoralis_Contig129:187621..187768 | 1680789575.1818717-CDS-P-littoralis_Contig129:187621..187768 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig129 187622..187768 + |
| 1680789575.1899436-CDS-P-littoralis_Contig129:188225..188394 | 1680789575.1899436-CDS-P-littoralis_Contig129:188225..188394 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig129 188226..188394 + |
| 1680789575.2006993-CDS-P-littoralis_Contig129:188777..189616 | 1680789575.2006993-CDS-P-littoralis_Contig129:188777..189616 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig129 188778..189616 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig129.54.2 >prot_P-littoralis_Contig129.54.2 ID=prot_P-littoralis_Contig129.54.2|Name=mRNA_P-littoralis_Contig129.54.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=637bp
MVSPFSCDGSSTTNTSRFGNNKRRRRCCFVSLQPAAPVALSVDELESDFA
PLASSSRSPIRATAGRSSSAFVPPATPQVAAAVAAAAEAAARTAAPPIVF
PRSVEDEPLPNPSSRRLRRRTGTGNGGPSASASAGAGARGVLSRVTKTAA
VAAAAASAVGVLATAPAGVGALMTEAQCESATLRGTEAELMESPRSDNST
EAAAAGVDQTIVATQTTFDRMVTDQLAIARTDGRDIAFRNLWSDHVWLGT
AEVTFAEAEALALFLEGSLPEFNCMNEHYGLSFVKGDAGETHAEGTLTAD
KVLNWSLLGPDYVALDGVYSFTPTDVTSVPSTTYLVAAAQTEEDGVFDVP
VFHYFLAESVDDVDPPDCPEPCTGEVVSYYMSFDLTGDVFLLGVSSADAD
DPRPCWLNLFDAVKDGPPAGGVDASLWEELELCTAELIQENFVDGDGTSD
ASDASSSSSGGTSAGGYAVAAAVLIPAILAIFVIAAFGLCRHQRHRRAKK
MKTTDEAWGVGLDGNGGERGKKSGSGTPPSRPRPPAGRFKLAPLVTQASK
AVTDSDAGGVGDGNVLGVASLTSFSPPPPPPRVLTDVSIDEQDDGAGVDA
AAAGDAGPGRQQQRRRQQAGVAVLADEEGVEDSVYP* back to topmRNA from alignment at P-littoralis_Contig129:179217..192827+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig129.54.2 ID=mRNA_P-littoralis_Contig129.54.2|Name=mRNA_P-littoralis_Contig129.54.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=13611bp|location=Sequence derived from alignment at P-littoralis_Contig129:179217..192827+ (Pylaiella littoralis U1_48)
CCGCATCGTGTGGTGTGAGCCATAAGCAGCGAGGGGCAGCGAACGACAAT
AGATCGAGTGACCCGGACGCTGGCTGGAGGAGCGGTTTAGTTGGAGGCTT
TGGATTATCGATCAACTTCTTGAAGCAACGGTGGCGACAAGCAGCGTGTG
GTCTCTCCATCCCTCCCTCACATACCTGTAGGTTTGTTTTCCTCGATTTA
TTTATTTTTTCCCGTGATTTCTGAATCCCACAACATCATCACCCGAGTCC
CGAGTGCACATTTTGAAGGTTTGAATGCTTGTGAGAGGATTCGCTCGCTG
GATGAACGTCTGTGAAGTTCTGAACCGTTGGACGAGGTTTTTGGCCATAG
TTATGCATGGAAGGGGGATCAATAGGTGCGTCTTTCACTCGTTGAGCAAA
GGCGGCCCACGTTCACGAGGAAATAATGCAGCAGAGAAGAAGGCACCAAG
AAAGGAAGGAAGAGATCTTTGTGTGATATGTTTTGTATTTCATCAAGCTC
GCGGAATTCCTGACCATCACCCGTACAGCATACCTACTGCTGTGTTAATT
CCCACAATAGTACCGGATGAAGAAGCTCGGGGCCAAACAAAGGCGAACCA
TGAAACCATCAATCGCTTGCTCGCTGTCCTCTCGCGTCTCGTGGGATACC
TGCTGTGTACACGCCACACATAGCTTTCTAATTACGGAAAATTCTGACAT
TCTGACAACAAACACTCCCGACGCACACAACTGCGGCATTTTTGTTCGAT
ATCGTTACCTACCTGGTATAGTCTACTGTATCGGTCTGGATGCGCAAGCT
CGGGGCCAAACAAAGGCGAACCATGAAACCATCAATCGCCTGCTCGCTGT
CCTCTCGCGTCTCGTGGGATACCTGCTGTGTACACGCCACATATAGCTTT
CTAATTACGGAATAATTCTGACATTCTGACAACAAACACTCCCGACGCAC
ACAACGGCGGCATTTTTGTTCGATATCGTTACCTACCTGGTGTAGTCTAC
TGTGTATCGGCTGGCGGTCGTTGTTCACACTTCCATATACTTCGTACAGC
ATTGAATATGAAGTAGTTTGGTGACGGCTCTCTCAGCAGTACAGGGAACG
AGTATCATGCAAGCATCTCCCGTGGCCCAATGACCGTGCATGTAGCGCTG
CTGAAAGTGTTGAAGAGATAGCCGGTGTAAGTCGATTGGATTTAGTGGGC
GCTGGTTTTAAATGGTGGTGTCGCAAACCTCCACCGCAGTCCGCAGTCAG
CCAGCACCAGCACAGCGATAGCAAGAAACAGAACCCCACCCGCCGTCTCT
TTCTTATTTCACAACATGCATCATACGCATCCAAGCGCTGCTGACTTCCA
AGCTGCTTTATGTCGTATTTGAAAAGGTGTACGTACGTACGTAGCGTCGG
AACTGGCCGAAAACGTCGATGGGTCGGCCACTCTCTGTCCAAGATATTTC
CAAAAACTTGTCACATGACTCTGCATGGACGCAGATACTCCGGAGTGGTA
CATCGTAGTAACATTAAGGGAACCGGGGAAAAGGTTCAAATAACCTACAG
GCTTTCGACAAACGCCTGATTTTTCTGGGTTTTCAAATTCTATCTCTAGT
ACGAATCTACCACCGCAGAATGCTCCCGGAGCCAGTCGCTGTGAGCAATA
ACTTTTGTCTTGGATCCAAGTCCTTGCGACATGCTATAGATTCACCGTTT
GCGATTTGTGAAAATCGAGCCCTCCTTCATCGAATTCTGCGGGCTACGAG
GCGTGGTTCGGATCCTACTTCTTTAGCAGCCATATTTTTGAACGCTTCCG
GCACACAGCACCCGAAAATACGGGGCATGTGTGAATACTTATGTACGGTC
TTCCAATTAATCACGGCGATGGGTGGGGTATGTGAGGAGAGCATTGTGCT
GAATTAGCGGTCGCAGGTACTCCGTACGCGTTGCTTTTTCGGGTGCTGCG
TGCCGGAAGCGTTAAAAAAATATACTGGAGTAGCTGCTAAAGCAGTAGCA
TCCGAACCACGCCTGGTAGCTCGCAGAACTCGATGAAGGAGGGCTTGTTT
AAAAAAATTCCCAAACGGTGAATCTGCAGCATGTCGCAAGGTCTCGGATC
CAAGATACCACTTATTCCTCACAGTGAGTGCCTCCGGGAGCATTCTGCGG
TGGTAGATTCGTACTAGGATGGACTGACGTGGACTTGTGGTCCCCTCGTT
AACCACTAGATGCAGAGGAACGGGGGTTCGATTCCCGGTGAATGTGTTCC
TTTCCTACTTTGAAAGCGGCTATGCTGTTAGTAAAAGCAGATTCGGCTCC
GCCGACGAGGGTAAGGACCGCGGATCCCTGCTCGCGAGAAAAAATCTCAC
GCATGTACCGCAGAAGGAAGGTGGGGGTAACTCTTCCTGTGTTGACCTTC
CTCCTGTGTGACCCCGTCGATGGGCCTAGCCTGTAGTTTGAACCCGCAGG
GTGCAGACTATGATAGTGTGCCAGAGAATATGGGATGACAACACACAACA
GACTGTGGAAACCCAGAAAAATCGGGCGTTTGTCGAAAGCCTGCAGGTTA
TGTGCAACTCATTCCACGGTAAATCGGATGATGTTGTATGAGTAACCTGC
CGTCGCTGTGAGAAACGGTCTTCGAAAAATAAATGACGCCGCACAGCATT
TCAGGGGTCGGTCCAGAAGGTAATATTTTTTTTCAATGTAAAGTATGAGC
CCAATCCTCAATCCAAGACGATAACGCAGTTGCTCAAAATAAGCGTTCCT
ATCGCGAAATGCGCTACTGCTGTACAGCAGTATCGAGCACATGAACTTAG
CAGAACTATGGAGCGGTGAGCCTGCGTGTTGGCGCGCTCAGATCCACTGC
TGGGGCCGAGATATCGGAGGTCGAAATTATGGTCCAGCCCCCAAACATTC
TCTTGTCCGTGTCCAATGCCGTTGTGCCCGTCACCACGGGCCTCATCTTT
TGAATTCCCGTCTACAGCAGAAACTAGGGTAAGGAGCTACTGATGTAGAC
CACTAGCTCCTGCTGTAGACCCAAGGCGGGGCCCCTTGCGGCAAGTACGG
CAGGCAGTGGCATTTGGTCGGTTTCTGACTGAAATGCGAACAATTTCTGG
ATTGCCTGGACCAAAACTTCGACAGCCGATATCTCGGTCCCAGCAGCAGA
TCTGAGCGTTCCAGCACGCAGGTCGCCGCTCCATTGTGTATTCTGCTGAT
TTCTTGCCTTCATCATGATTGCGCAATTCTCCATAGGAACTCGTATTCTG
AGCAACCTGCGTTGTCGTCTTGGATTGAGACGTTGGCATTTTGAGAAAGA
TAGAAAAATATCCGAGGAAGGACACTCACCCGAGACGGGACTCCGTGAGA
TGTTTTGAGGGTGGGTATGTCGGCGGAGAAAAAAAACACCTTTGAGGCTC
AACCCTTCTTGATCCCCACTCCTATGGTAGATGGGCAATTGAGAGTTATC
GAGTTGGAAAAGCGTTTTCCAAGCCTAATTTTCCAAGTTGGAAAATCAGA
TTGGAGCCAACTTGTGGGAAAATCGGAAAATCTGGACAGCGATTTGAAAT
CAGATGGGGTTGTCGGATGGACGGCAGGCGGTTTGGGCTAATTTGAAGAA
ACTGCTGATGGCGCAGAGCGGCAAGCGTATTGGCCACAACGTCCAGGATC
GCACGTAGCGTGGGTACCTGCACCTGGCGCGTGCGTTTGTGTGCTCGATT
GTGCCTTTGTGCTTTGGTGTGGGCCGTGAACCACTGCGGCATAACCTCGT
GGCCGCGCGCGAGCGGCCGATTCCAACTTTGAATCCGAGGTAATTTGACT
TGGAACCCGAGGGTGGATTACAAGCAAGTCGATTAGAATGCGGAGAATCG
AAAAGTATTTTCCAATTCCGACCGAAAACAACCCCATTAGATAGGATTAT
TTTCCAATCCTGGATTTTGGATTCCAATTCCTCATGTGAAACCCTTGGAT
TCTAACGGTCGGCGTTGCCATGAGACTTAGCCTTATGGCAGATGGGCGAT
TGGAATTTCTCGAAAAGCGTTTTACAAGCCTAATTTTTCTAGTTTCAAAA
CCAGGCTAGGGCCAACTTATGGGAAAACCGGAAAATCTGGACAGTGATTT
GAAGTCAGATGGGGTTGTCGGATGGACGGCAGGCGGTTTGGGCTAATTTG
AACAAACTGCTGCTGATTACGCAGGGCGGCTAGCGTAATAGTTAGCTCGG
CCAGCATTCCACGTAGTTCGGGTATCTGCACCTGGCTCGTGTGTGCGTAT
TTGTGCTTGGTGTGGGCTGTAAACCACTGCAGCGCGCGACGAATTCCAAC
TTGGAATTCGAGGTCATATGGCTTGGAATCCGAGGGCAGATTCCTAACGA
GTCGAGTAGAATCCGCAGAACTGGAAAGTATTCTTCGATTACGATCGAAC
CCCCCCTCCCCGTTATATAGAATTACTTTCCAATCCTGGAATTTGGATTC
CAATTCGTCATGTGAAACCCTTGGATTCCAACAGTCGGCTTGACCATAAG
AGTGGGCCTGAGTCTCTGCCCTGAGCGGGGTTGAGCACCAAAACTCGGAG
GAGCACTTTGTTTTACTTCGTATTTTTTAGTCCGGTCTACTCGATGCAGA
TGGATGCTGTACCCAGCATCTAACTGCTCGCTTCGCGTCCCGACGAAAAC
AACCCTCGACGAAGGGCGCCCACCCAACCAAAGTACGTCGCAACCTCGTA
GACATGATTCGCATTCGCCTATGACGGTACATCGTGGTATTACAGCAACA
GCAGCAGCAGCAGCAGCAGCAGGTTAGATGTGTCTGTGGCAAGAACAACC
GAGACCGGCAACAACAGCAGACGGCGCATAGAGGATGGGCTGATACAGCA
GTCGCGTATCACGTGCGAGCAGAGAACACACACAACGAACATCCCAACGC
AATGCTCATGGATCGATGTGTGTGTGCAGAGAACGAGAACGGCAGACAGC
AGCAACGGGGGGTGAGCTAGAGAAGCCGATGGTCTGCGCCTCGAAGGGGC
TTTACGGGAGAGATGCGCAGATTACAGAAAAGCCTTCAAGTCCGCAAAAA
TGAGCATCCGGGATGAGGAAAATGGCATGTATTGGAAAAATAGACTGATG
TACTTCGAAGTAAAATACAGCTGACAACACAGCGGCATCACGGAAAACAC
CTTTCCAGATGTGTCCGCGACGGAGAAGTGGCCGGGCGACCCGACCCTTC
TTTCATACAAACCAATCGATGTAGCATATCGCGGGCCTTTGTCGCGGCCC
CTGCGTGTATTCAGTTCGTGCGTGGCTGGTTTGCTCGTGCACTTCGGCAG
CGAATTTGCCCTTCGAGGCCCGTTCTTATCCGGAATTCCAGTCTGAGTCT
TGGTTCCGAGTCTGAGAGTTATCAAGCAAGGAGGTCTAAACAACACTTGA
ACACTAAAGAGTGTTCTGGACGCCACGTTGACCAATTTGGATGATGCCTT
CGCCTCTGGATTTCCCGGTGTCGGTATCCGAGCGCACGCAAATTTTTGAA
GCAGATGATGCCCGTCGTGTCGTGATTCGTTGGGCTGAAGCAGTTGTTTA
AGCGAGGCGCGGGGGGTGCTTGATACCAAACCCCTCGAACGCGAAGGCCT
TTTCTACAACAAACTCTGACCAAAGATTGGCGTGGAGGTCTACCTCCAAG
AACTGCTGTGATGGGTGATGGACTGACCAAAACAATACTAAAAAAATATC
CCGTTGCAGTCGTAGTTTTTTTTTTTGTATGAGGTAATGATTCAAAAGAC
GTGCTGGAGCAGAAACTTTCCGCAGCGTGCCTCGTATGCATGCACCACGT
GATACACAAGAGAGAGGGCGAGAGAGAGAGAGACGAAGATCTTTGCAAGC
GATGCTACACTGACTGTTGTATTCCATATGTATAGAGCCATACAAACGCA
TCAGGTGTGATGCGATGTGATTAATTATTTTCCAAAAATATTCTAGGAAA
ACGTTCATCGTTACAGATAGAACACCCACCTTAAACGGGACTCTCAGCAT
GTCATGCAGTGTGTGTGTAAGTTGAATTTCTCGCGCGAGGGTTGGTTCCA
CAAAGCAGTCCTGCCGAGAAAATCTTTGCGTTTCCATCGTAGCCGTTCTA
CAAAATTAAACAAGTGCAGCATACCATCCCAATTATTGAGACAAAATCAA
TTTTTGAAGGGAATGTTTCACTGTTTTTGTCATAACCACGATCATATTGT
GCTGCGCCCCCCCCCAATCCCCCCCCCCCCCCCCCCCCCCCGCCCACTCT
CAGTGTTTCACGCGCTCCTTTTCGTTGTTCTCGTCCCGGCGGTCTATGCC
CGCTTCTTTCGCAGATTACAGACCCACGGAGGAGTAATTCCGCGTCACCT
ATCGTATAGCGGCGTGTGTCAGCGGAGAGATAAGAGGCAGCAAAGGACAT
GGTGTCCCCCTTCTCGTGCGATGGTTCATCCACCACCAACACGAGCCGCT
TCGGCAACAACAAACGGCGACGAAGATGCTGTTTCGTTTCTCTCCAGCCG
GCAGCGCCGGTGGCCCTCTCCGTAGACGAACTCGAAAGCGATTTCGCACC
CCTCGCTTCATCCTCGCGTTCCCCAATACGCGCTACTGCCGGTAGGAGCA
GTAGTGCCTTTGTACCCCCGGCTACTCCACAAGTAGCAGCAGCAGTAGCA
GCTGCAGCAGAGGCGGCAGCCCGCACGGCCGCTCCTCCCATCGTTTTTCC
CCGATCTGTCGAAGATGAGCCGTTACCAAACCCGTCGTCGAGGAGACTAC
GACGGCGCACAGGCACCGGTAACGGCGGTCCCAGCGCCAGCGCCAGCGCC
GGCGCCGGCGCGAGAGGCGTGCTGTCTAGGGTAACGAAAACGGCGGCGGT
TGCTGCCGCGGCGGCGTCGGCGGTGGGCGTCTTGGCAACCGCGCCCGCCG
GCGTAGGAGCGCTCATGACGGAAGCGCAGTGCGAAAGCGCCACGCTCCGG
GGCACGGAGGCGGAGCTGATGGAGTCTCCGAGGTCCGACAATTCCACCGA
GGCGGCGGCGGCTGGTGTCGATCAGACCATCGTTGCTACTCAGGTGTGTT
ATGTGTGTGGGCGTGGGCCTGGGCGTCGGGCAGACCAACCAGCGTGGATA
AATGTGACTTGACTGTTATGCTGCCTGAGCTTTTTTTTGTGGTCGCCCGG
ATTTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTA
TCTCCTACCCGTCCACCCGCCTGATGCCTCTGTTTTTTGTGTGTGGAACA
CCTTGCATTTTCCTTTCCCTCGTTGCAGACAACGTTCGACAGGATGGTGA
CAGACCAGCTCGCGATTGCGCGAACGGATGGGCGGGATATTGCTTTCCGA
AACCTTTGGTCCGACCACGTCTGGCTTGGGACGGCAGAGGTGAGAACGAG
CACCACATCGCGCCGTGCAGGAAAGTGTTTCGGCGAGTTTGGGGATCCAT
CACTCACTGGGTGACATGCCGTGGTCACGTCGGGAAAGGAAGGCGGAAAT
GTAGTCGTACTCGTATGAAACGACACCTTCGCATCCCTGTCGCTGCGCTG
TCGGGGCGGGCAGCACGCCACGTCGGGGTACCGCTCAGCGTACTGGCGGG
CGTTACACCTCTTGAGTTCCGGCCGCGCTGACGCGAGGAGCTCGGGGAGA
CGTGAGGGAGTAGGTGACAGTGTCGCCGAAGATACGACGAGATGGGTATC
ATAGCGTAGCGTATCATTTCTGGGGACCCTCAACCTCCGACCCCCCCCCA
CCCCTCCCCCATCCGGGCGCACACTCACAGCCAGCGCCGGTCGGGACACC
TTCTCAACATCGGCACACCGTGCCGTGCTCTCCTGCCCGATCGCGTCCGA
CCTGTCGGGCTCAATGACCCAAACCAAAATTTCTCCTTCATTCTTAGATC
ATACTCCGGTGGTGACGTACGAAGTAGCATTTAACGTAGCATTCAACGCA
TTTTCGCGGTCGCCCCCGTGGTTCAGTTGGTAACCAACGTAACCCCCTGA
CATTCACGCGTAAGTTCGAATCCCAGTGCAGTATCACGATCTGGGTTTTC
TTCTCACAATGCGCGTGAAAGTGGAAAGCGATTAATTCGTGAGTAAAAAA
AATTCGATCGTACCATCGACGAGGGAAAGGGATTGCTGTCCCCTTTCTCG
CGATAAAAGCTCAACCAAACAAGGCAAACACCGCAGAGGAAAGTGGAGAA
AAAGAAAAACGTCTGTGTTAACTTCCCCCTGTGTGACCCCAGTTGGAGCG
TCTACCTACCCGAAAGGTGTAGAGTGGCGTCCAATTAAAGGGATGACAAC
ACACACACACTGATGCGGAGACTGGTGCCCAAAATAAATGGCATGACACA
CACACACACACACACTGATGTGACCGCGCGTGATGTGAAAAAAAACCCCG
ACCAGGTGACGTTCGCCGAAGCCGAGGCCTTGGCTTTGTTCCTCGAGGGC
TCTTTGCCCGAGTTCAACTGCATGAACGAGCACTACGGGTTGTCGTTCGT
GAAAGGGGATGCCGGGGAGACGCACGCCGAGGGCACGCTCACGGCAGACA
AGGTCGGTAGAGGGCCGCCCCCACGCTTGTTCGATTGTGTTTGGCGGGGG
AGGGGGGGGGGGGTTGAATCGGCTGAAATGGGTGTTTTACTGTGGTGTCG
GCTGCACATTTTCTCGGACACTAATTAGTCTCTCGGAAATCTCAGCAGGA
GAAGAGGCTCGGGTTGGTTGAAATGGGTGTCCTACTGAAGTATGGGCCGC
GATTTTCTCGGAAGATAAATTGATTTGCCTCTTGGCAATCGGCAGGAAAA
GAGTATCGACCGCGCGCCATATTTTGTGCACAGCGACTGGCCAGCGAAAC
GGCCATCAGGCGACCAATGGGGTTGCAGATCACCGAAAGGCAGCGACACA
TATATACAAGTATATCGTAACGCACACGGTCTCTTGCAGCACCAAACGAT
TCCAGCAAACAGACACACGACCACTGAGGCAACCACCGGCTTTTGACTCT
TTGTCTCAGGTGCTGAACTGGAGTTTGTTAGGTCCAGACTACGTGGCCCT
GGATGGCGTGTATTCCTTCACCCCGACGGACGTGACCTCGGTGCCGTCGA
CGACGTACCTCGTCGCTGCTGCTCAGACGGAAGAAGATGGCGTGTTCGAC
GTCCCTGTGTTCCACTACTTCTTGGCAGGTGCGGGCATGATGTGCGTGTC
ATTCCACACGCAAGCGCGCGCGTTCGCGAAATTGTCAGATAAAAAAGTAC
AAGCAGTGTGTAGCAAAGAAAACCATATGGTGCGTCCGTCGTCCGTGTGT
GTGGTATGCTTGTTTGTCGTTGGTTGTCTGTCTGTTCGTTATTTTTTTTT
AACGAAAATGTTGCGGGATGTCATTTTACAAGCATGCGTAGCAAAAAAAA
TATGATGCGTCCGTCGTCCGTGTGTATGGGATGCTTGTTTATTTTTGGTT
GTTTTTTTGGTGGTTGGTTTTCGGAACGAGCTTGTTGAGGGGTGTAATGT
TCTGCTTCCCAATTCTCTGACTCCTCTTTGTGTTTTGGTCCTTCTCAATG
ATCAAAACCAGAATCGGTGGATGATGTGGACCCGCCCGACTGCCCAGAGC
CCTGCACGGGGGAGGTGGTGAGCTACTACATGTCCTTCGACCTGACGGGC
GATGTGTTCCTCTTGGGCGTGAGCTCGGCAGACGCCGACGACCCGCGGCC
GTGCTGGCTCAACCTGTTCGACGCCGTGAAGGACGGGCCACCCGCCGGCG
GCGTCGATGCGTCGCTGTGGGAAGAACTCGAATTATGTACGGCTGAACTC
ATCCAGGAAAATTTTGTTGATGGTGACGGTACCAGCGACGCCTCTGACGC
CAGCAGCAGCAGCAGCGGCGGCACCAGTGCGGGGGGGTATGCGGTCGCCG
CAGCGGTTCTGATTCCGGCGATCCTCGCGATCTTCGTTATCGCAGCGTTC
GGGCTCTGTCGGCATCAGAGGCACCGGCGGGCGAAAAAGATGAAGACCAC
GGACGAGGCTTGGGGGGTAGGGCTGGACGGTAACGGCGGCGAGAGGGGCA
AGAAATCCGGCAGCGGCACCCCCCCGTCGCGTCCGCGCCCCCCCGCGGGG
AGGTTCAAGCTCGCACCGCTGGTGACGCAGGCATCCAAGGCGGTGACGGA
TTCGGATGCCGGCGGTGTCGGTGACGGCAATGTGTTGGGTGTCGCGAGTC
TCACGTCGTTCTCGCCGCCGCCGCCCCCACCGCGGGTGTTGACGGATGTC
AGCATCGACGAGCAGGATGACGGTGCCGGTGTTGATGCTGCTGCGGCAGG
AGACGCAGGCCCAGGGCGGCAGCAACAGCGGCGGCGGCAGCAAGCCGGCG
TGGCGGTTTTGGCGGATGAAGAGGGCGTGGAGGATTCGGTATATCCCTGA
GATTTTGTGGGATATTGGTCGATGAGATTGTCATGACATGAAATCGTGAT
CTTGTCTTTCATTGATTATTTCTCTACCGGGCGCTCGTCCGGGCTGTGTT
TGGTGTCTGTTTTTACGTGTGATCCCCCCCCTGCATGTGCCGGCAAAACC
GCCATTGTATGGTACGATTGTTTGAAGGAGGCGCGTAGGTCCCGTTCGGG
TGGGGGGTAAGGCAACCCAAACCTGTCGTCCAGTATTTTTTGTACATTGA
TGCTGCGACCCAGGTGGGTGCCGCCCCGCAGTTGGAGCGTTCGTTTCGTT
GGCGGTGCTGGGTTGGTGCCATTCCGAGAACGATGGTTTTTGGTCGGCTG
CCATCATTCGAGATGCGGCGTTGTGTGTGCGTGAGAGCGTATTCGGGTGT
CTGAGTGTGTTGTTTTTTTTTGCGCGGCACTGATGGAACTTCATTTTTTG
TTTTCTTATTTTTGGTCCCTTTTTTTCTTTTTCTTTTTTACAGGTGTGGC
GGTCAGTTCGCGATAATGTTATACTTCGTATGATGTGTGATGGCCATATT
TCTCACCGTTGAGGGTTTGGTGATGAAAGGCTCGTGGAAAGGAGGGTAGT
AGGCGACAGCTGTACCTTCATGCGTTGGGCGCTGAAGGAATAATGGGGGT
TGCCTTCTCCTTTTTTTTTTTTCATTTTGTGACCATTTTGAGTAGGTGGG
GAAATCTTACGCGCAGCTGGCGGGGTGTGGGGAGGGGGGGGGTATGGTGT
GAGGGAAAAAGAAACTGCACAGCGTGAGCGAATCAGTGCGGGGTGGCTGC
CGCCTTCCTGTCTCCTCGGTCCCCGGTCGTGTCGCATGTGTCTTGTGTGT
GTGTTTGGTGTGCGTCGTAGTTGTGTATGACGTCATACGTGCGCACGCTT
GGATGATAGAATCAAATCTTGTCAACACTGCGCGCTCGAATATTCTTTCT
TTTTGAGTCTGGCCCTTTTTTTGTTTTTACATCTCATCCAGCGATCTTTC
CATCTGTCTGCTGCTTGTCTTCTTGGAGAAAGCAGATCGATCGATCGTTT
TTTTTCTGTTTTTCTTCCGTCATGTCCCTTGGTTGTCTTTTGTTTAATCA
GCGCATGTTATTGTGCTGCAGCTGCTGCGTTTTACAGTGTAGCGCGATTC
GGTTTGGCACACAGCAGTACAGCGTGCGCACGCACATGCCTCAAGAGTAA
CGTGTGGCTGTTCCCCGCAAGACGCGTAGCTTTGTGTGCCCGTTTAGCCG
CCCCCCTCGACTCAGGGTCGAATTTGTTGTTTTTAGTGTTGAAATCGTTC
GTGGATGCAGTAGTATTTACATGCTTGTCGTGAACTTCTGACGACTTGGT
GACGCGGTTCTTCCCCTGCGGATCATATTTGTCTCCCATATCATACAGAT
GTATGTACAGATGTAGAGCATGGATGGGAAGGTACACCGTTCGCTCGAGT
TGTTTCTTCCAGTAAATAAAATTGTTGTATCGACTTCGCCGGTGTCCCAT
CAGACCCAGGGGTCCACAGACGTGCACGGTTTGTAGGGATTCTCCCGCAC
CCACCGCACCCTACAAACTTACTCTGGTACGCATGTGAACGCGTGTTTCT
CGGATTTGTTGCGGCGTCGCTGGCGTTGTTAGTCGGATATTTGTCCCGCT
TGCGCATTAATTTGCACATTAGCTTTTGCTATATCTTTTCTTACTTATAT
TTGCGGCTGCGAAAAACGCCTTGACTAGCTAGCCCCGTGCACTAATATAG
AATCCCCCCCCCCCTCCTCCCATACGTCGCGCGAATTGAACCGTCCAACT
GAAATTTACGTATCGCACGAATATTTAGAGTGCGGGGTTGGTGTCTTGCG
CATAACCACGCATGTATGACCTACCGGGTGGTCTGGGGGCTTTTTGTTTG
GGATACCGTAGTACTCGAAGTATGATTTATGATGATACTTCGAACTTCGT
ACAGTACGAAGATTTTTTCGTTGAATCTCCCTCTTGTAACTGCTGTTGCT
GTTGGTGGTGTTGTTGTTGTCGTCGTCGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTGTTGTTGTTGTTCACAGGCACATTGTGCTGCGATCTTCTTTTCA
CTCCCGAATTTCTCGTGGGACTCACGGGGATGTACACCGCCCCGGCTTTT
TTTGTTGCTGTCGCTGTACGTCGTTGTCGTCGACTCTGCACTGTGAGTAC
GCCACCATGGTTGTATGACATGAAAGCATGCGTACAACAACTGTTTAAAT
GACTCCTTTGTCGTGTATCTGCCCTTTTAGGCTTCTTCTTTGCCGCACCT
ACCTTCCTACCTTACTTTGACGCTGGTCTCCAAAGCCGCCACGAACAGCG
CTGCGGGCGTGCGTGTTTTTCGTGGTGTCTTTTCGTAAATCTCCTGTCTT
GTCTGTTGTGTGGTGGCCGCAATGCTATGTTTGCCTGCGCTGGCTGGCGT
ATTGTTTCGAATTGGGTGATTGAAGATGGTTTTCTGTTCCTTGCTGCTGC
GCCGCTTCACGGCATTTCGGTCGACATCAGCAGCAGGGTAAGTCTAGGTT
ACTGTGTTCGTGTTGCGTAAAAACCGTGCCGGTCGAAGTGCACGTACACA
AAAAGTTTGGTGGGTGGGATTTCGCGGCGAAAAAGTATTGCTGTTGATGC
TGGCCTTGTTAGTGGACTCGAGGTCTTGTTTTCGTTTGGCTTTTTATTTT
TCTGCGTCGTCTTTCTTTTGCGGTACGTCTCAAAAGTAGCCGAGAAATAC
GTCATGATGAGGCGGCATACACGTACTGGGTGCTCGCTGTGTTTTGGGGG
CTGATACTGATCTGTCCCCTCTCTTTCAAATTGTTTGCATACGCATTGCG
TATGATGTATTCAGCAGCTTGATATACTCGGGTATCTGGTTATTTTACAT
TTTCGAATTCTGCCCCGTGTAACGAATGTAGCAGTGCCTGCCCGCCGTCT
TCTATATTTTGTTGATAGCTTGTTCGTTGAGCCAGGGCACGGATGGCGGT
TTTCGTTCGTTGGTTCTCTTTTTCTGTCGTCGACGAGTCGGTGTATCTCA
GTGAAGTGACATGTGGTGAGTGCTTTATTTTTGACCTTTTCGTGTGTATA
TAGCTCATTCCCGACGAAGTCTATACTACTGCTTCTTTTGTTGTATAGTT
ATCCATTCGTCCACGATATCGTACATATTTGTCATGCCATAGTGTCCTTT
GAGAGCGCCCG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig129:179217..192827+ >mRNA_P-littoralis_Contig129.54.2 ID=mRNA_P-littoralis_Contig129.54.2|Name=mRNA_P-littoralis_Contig129.54.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1911bp|location=Sequence derived from alignment at P-littoralis_Contig129:179217..192827+ (Pylaiella littoralis U1_48)
ATGGTGTCCCCCTTCTCGTGCGATGGTTCATCCACCACCAACACGAGCCG
CTTCGGCAACAACAAACGGCGACGAAGATGCTGTTTCGTTTCTCTCCAGC
CGGCAGCGCCGGTGGCCCTCTCCGTAGACGAACTCGAAAGCGATTTCGCA
CCCCTCGCTTCATCCTCGCGTTCCCCAATACGCGCTACTGCCGGTAGGAG
CAGTAGTGCCTTTGTACCCCCGGCTACTCCACAAGTAGCAGCAGCAGTAG
CAGCTGCAGCAGAGGCGGCAGCCCGCACGGCCGCTCCTCCCATCGTTTTT
CCCCGATCTGTCGAAGATGAGCCGTTACCAAACCCGTCGTCGAGGAGACT
ACGACGGCGCACAGGCACCGGTAACGGCGGTCCCAGCGCCAGCGCCAGCG
CCGGCGCCGGCGCGAGAGGCGTGCTGTCTAGGGTAACGAAAACGGCGGCG
GTTGCTGCCGCGGCGGCGTCGGCGGTGGGCGTCTTGGCAACCGCGCCCGC
CGGCGTAGGAGCGCTCATGACGGAAGCGCAGTGCGAAAGCGCCACGCTCC
GGGGCACGGAGGCGGAGCTGATGGAGTCTCCGAGGTCCGACAATTCCACC
GAGGCGGCGGCGGCTGGTGTCGATCAGACCATCGTTGCTACTCAGACAAC
GTTCGACAGGATGGTGACAGACCAGCTCGCGATTGCGCGAACGGATGGGC
GGGATATTGCTTTCCGAAACCTTTGGTCCGACCACGTCTGGCTTGGGACG
GCAGAGGTGACGTTCGCCGAAGCCGAGGCCTTGGCTTTGTTCCTCGAGGG
CTCTTTGCCCGAGTTCAACTGCATGAACGAGCACTACGGGTTGTCGTTCG
TGAAAGGGGATGCCGGGGAGACGCACGCCGAGGGCACGCTCACGGCAGAC
AAGGTGCTGAACTGGAGTTTGTTAGGTCCAGACTACGTGGCCCTGGATGG
CGTGTATTCCTTCACCCCGACGGACGTGACCTCGGTGCCGTCGACGACGT
ACCTCGTCGCTGCTGCTCAGACGGAAGAAGATGGCGTGTTCGACGTCCCT
GTGTTCCACTACTTCTTGGCAGAATCGGTGGATGATGTGGACCCGCCCGA
CTGCCCAGAGCCCTGCACGGGGGAGGTGGTGAGCTACTACATGTCCTTCG
ACCTGACGGGCGATGTGTTCCTCTTGGGCGTGAGCTCGGCAGACGCCGAC
GACCCGCGGCCGTGCTGGCTCAACCTGTTCGACGCCGTGAAGGACGGGCC
ACCCGCCGGCGGCGTCGATGCGTCGCTGTGGGAAGAACTCGAATTATGTA
CGGCTGAACTCATCCAGGAAAATTTTGTTGATGGTGACGGTACCAGCGAC
GCCTCTGACGCCAGCAGCAGCAGCAGCGGCGGCACCAGTGCGGGGGGGTA
TGCGGTCGCCGCAGCGGTTCTGATTCCGGCGATCCTCGCGATCTTCGTTA
TCGCAGCGTTCGGGCTCTGTCGGCATCAGAGGCACCGGCGGGCGAAAAAG
ATGAAGACCACGGACGAGGCTTGGGGGGTAGGGCTGGACGGTAACGGCGG
CGAGAGGGGCAAGAAATCCGGCAGCGGCACCCCCCCGTCGCGTCCGCGCC
CCCCCGCGGGGAGGTTCAAGCTCGCACCGCTGGTGACGCAGGCATCCAAG
GCGGTGACGGATTCGGATGCCGGCGGTGTCGGTGACGGCAATGTGTTGGG
TGTCGCGAGTCTCACGTCGTTCTCGCCGCCGCCGCCCCCACCGCGGGTGT
TGACGGATGTCAGCATCGACGAGCAGGATGACGGTGCCGGTGTTGATGCT
GCTGCGGCAGGAGACGCAGGCCCAGGGCGGCAGCAACAGCGGCGGCGGCA
GCAAGCCGGCGTGGCGGTTTTGGCGGATGAAGAGGGCGTGGAGGATTCGG
TATATCCCTGA back to top
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